[ { "id": "eschner-2023-ims", "type_id": "journalpaper", "tu_id": null, "repositum_id": "20.500.12708/187705", "title": "Illustrative Motion Smoothing for Attention Guidance in Dynamic Visualizations", "date": "2023-06", "abstract": "3D animations are an effective method to learn about complex dynamic phenomena, such as mesoscale biological processes. The animators’ goals are to convey a sense of the scene’s overall complexity while, at the same time, visually guiding the user through a story of subsequent events embedded in the chaotic environment. Animators use a variety of visual emphasis techniques to guide the observers’ attention through the story, such as highlighting, halos – or by manipulating motion parameters of the scene. In this paper, we investigate the effect of smoothing the motion of contextual scene elements to attract attention to focus elements of the story exhibiting high-frequency motion. We conducted a crowdsourced study with 108 participants observing short animations with two illustrative motion smoothing strategies: geometric smoothing through noise reduction of contextual motion trajectories and visual smoothing through motion blur of context items. We investigated the observers’ ability to follow the story as well as the effect of the techniques on speed perception in a molecular scene. Our results show that moderate motion blur significantly improves users’ ability to follow the story. Geometric motion smoothing is less effective but increases the visual appeal of the animation. However, both techniques also slow down the perceived speed of the animation. We discuss the implications of these results and derive design guidelines for animators of complex dynamic visualizations.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "teaser", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 1400, "image_height": 1080, "name": "eschner-2023-ims-teaser.png", "type": "image/png", "size": 1527403, "path": "Publication:eschner-2023-ims", "url": "https://www.cg.tuwien.ac.at/research/publications/2023/eschner-2023-ims/eschner-2023-ims-teaser.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2023/eschner-2023-ims/eschner-2023-ims-teaser:thumb{{size}}.png" }, "sync_repositum_override": "event,lecturer,location,projects", "authors": [ { "id": 1653, "drupal_id": 1354, "orcid_id": "0009-0001-6784-8503", "website": "https://www.cg.tuwien.ac.at/staff/JohannesEschner", "firstname": "Johannes", "lastname": "Eschner", "searchname": "Johannes Eschner", "is_teacher": false, "name": "Johannes Eschner", "publications": [ "ESCHNER-2019-GDT", "eschner-2023-evl", "eschner-2023-ims", "eschner-2023-rar", "eschner-blur-2022" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "eschner-2023-evl", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "eschner-2023-ims", "field_id": "lecturer", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1653", "__class": "Author" }, { "id": 935, "drupal_id": 45, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/PeterMindek", "firstname": "Peter", "lastname": "Mindek", "searchname": "Peter Mindek", "is_teacher": false, "name": "Peter Mindek", "publications": [ "eschner-2023-ims", "karimov-2013-vivisection", "klein_2019_MSA_Poster", "klein_2019_PGG", "klein_2019_PMP", "koch_bernhard_2018-1", "kouril-2021-molecumentary", "lemuzic-2015-hiv", 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"ordernum": 1 }, { "publ_id": "zauner-2013-svkinect", "field_id": "supervisor", "ordernum": 1 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=935", "__class": "Author" }, { "id": 1110, "drupal_id": 625, "orcid_id": "0000-0003-1387-5132", "website": "https://www.cg.tuwien.ac.at/staff/ManuelaWaldner", "firstname": "Manuela", "lastname": "Waldner", "searchname": "Manuela Waldner", "is_teacher": true, "name": "Manuela Waldner", "publications": [ "2019-ic", "Alharbi_2021", "bernhard-2016-gft", "byska-2019-mdfc", "eschner-2023-evl", "eschner-2023-ims", "geymayer-2017-std", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "indirectBiasLanguageModels-2023", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "mazurek-2018-veq", "polatsek-2018-stv", "reina-2020-mtv", "sietzen-2021-perturber", "sietzen-ifv-2019", "sMolBoxes_2022", "sorger-2019-odn", "sorger-2021-egonet", "steinboeck-2018-lbg", "Waldin_Nicholas_2016_Chameleon", 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"steinboeck-2018-lbg", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "stoff-concepMap-2021", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "textures-3d-printing", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "trautner-2018-imd", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "unger-2019_vcp", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Unger2020", "field_id": "supervisor", "ordernum": 1 }, { "publ_id": "waldner-2013-ubiWM", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "waldner-2014-af", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "waldner-2014-ghi", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "waldner-2017-vph", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "waldner-2019-rld", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "webGPU_aggregateVis-2023", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "wolf-2023-cc", "field_id": "supervisor", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1110", "__class": "Author" } ], "doi": "10.1111/cgf.14836", "event": "EuroVis 2023", "issn": "1467-8659", "journal": "Computer Graphics Forum", "lecturer": [ { "id": 1653, "drupal_id": 1354, "orcid_id": "0009-0001-6784-8503", "website": "https://www.cg.tuwien.ac.at/staff/JohannesEschner", "firstname": "Johannes", "lastname": "Eschner", "searchname": "Johannes Eschner", "is_teacher": false, "name": "Johannes Eschner", "publications": [ "ESCHNER-2019-GDT", "eschner-2023-evl", "eschner-2023-ims", "eschner-2023-rar", "eschner-blur-2022" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "eschner-2023-evl", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "eschner-2023-ims", "field_id": "lecturer", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1653", "__class": "Author" } ], "location": "Leipzig, Germany", "number": "3", "open_access": "yes", "pages": "12", "pages_from": "361", "pages_to": "372", "publisher": "WILEY", "volume": "42", "research_areas": [ { "id": "BioVis", "drupal_id": 4127, "name": "Biological Data Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" }, { "id": "Perception", "drupal_id": 4136, "name": "Perception", "short_abstract": "In this area, our research focuses on understanding and using the capabilities of human perception for designing high-quality graphics algorithms and effective visualizations.", "abstract": "
In computer graphics we produce images, videos, visualizations and other content that is perceived by humans. By understanding the limits of human perception, we can design and optimize rendering algorithms that perfectly fit users' needs, tailor visualizations to make data better understandable, and effectively draw the user's attention to important information.
\r\n", "website": "https://www.cg.tuwien.ac.at/research/area/Perception", "teaser": { "name": "teaser.PNG", "path": "research_area:Perception", "type": "image/png", "size": 259428, "orig_name": "teaser.PNG", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/Perception/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "rend", "vis" ], "publications": [ "bernhard-2011-maicg", "bernhard-2014-EFD", "bernhard-2014-GTOM", "bernhard-2016-gft", "birkeland_aasmund_2014_pums", "cardoso-2022-rtpercept", "ERLER-2017-HVR", "eschner-2023-ims", "eschner-blur-2022", "georgiev-2019-cbg", "Groeller_2016_P7", "grossmann-2021-layout", "hecher-2012-MH", "hecher-2014-MH", "HECHER-2017-HDY", "huerbe-2019-BA", "Kathi-2018-VRB", "koch-2019-PR", "Koszticsak-2017-ewt", "KREUZER-2017-PBF", "kristmann-2022-occ", "kroesl-2018-DC", "kroesl-2018-TVS", "kroesl-2019-ICthroughVR", "kroesl-2019-ThesisFF", "kroesl-2020-XREye", "Laschober-2018", "Luidolt-2020-DA", "luidolt-2020-lightperceptionVR", "mayr-2021-wec", "mindek-2017-dsn", "panfili-2019-VAVR", "panfili-2021-myop", "plank-2017-sldg", "polatsek-2018-stv", "Reichinger-2016-spaghetti", "schindler_2020vis", "schuller_reichl-2019-avt", "Semmelrath-2022-IRS", "stappen_SteFAS", "steinkellner-2022-dll", "sundstedt-2013-vag", "trautner-2018-imd", "Vasylevska_Khrystyna-2019-TEFVR", "viola-evr", "Waldin_Nicholas_2016_Colormaps", "Waldin_Nicholas_2016_Individualization", "Waldin_Nicholas_2017_FlickerObserver", "waldin-2017-thesis", "waldner-2013-facetCloudsGI", "waldner-2014-af", "waldner-2017-vph", "waldner-2019-rld" ], "projects": [ "CROSSMOD" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=Perception", "__class": "ResearchArea" } ], "keywords": [ "Empirical studies in visualization", "Animation" ], "weblinks": [ { "href": "https://onlinelibrary.wiley.com/doi/10.1111/cgf.14836", "caption": "Computer Graphics Forum", "description": 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"tu_id": null, "repositum_id": "20.500.12708/81180", "title": "sMolBoxes: Dataflow Model for Molecular Dynamics Exploration", "date": "2022-10", "abstract": "We present sMolBoxes, a dataflow representation for the exploration and analysis of long molecular dynamics (MD) simulations. When MD simulations reach millions of snapshots, a frame-by-frame observation is not feasible anymore. Thus, biochemists rely to a large extent only on quantitative analysis of geometric and physico-chemical properties. However, the usage of abstract methods to study inherently spatial data hinders the exploration and poses a considerable workload. sMolBoxes link quantitative analysis of a user-defined set of properties with interactive 3D visualizations. They enable visual explanations of molecular behaviors, which lead to an efficient discovery of biochemically significant parts of the MD simulation. sMolBoxes follow a node-based model for flexible definition, combination, and immediate evaluation of properties to be investigated. Progressive analytics enable fluid switching between multiple properties, which facilitates hypothesis generation. Each sMolBox provides quick insight to an observed property or function, available in more detail in the bigBox View. The case studies illustrate that even with relatively few sMolBoxes, it is possible to express complex analytical tasks, and their use in exploratory analysis is perceived as more efficient than traditional scripting-based methods.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "teaser", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 1604, "image_height": 942, "name": "sMolBoxes_2022-teaser.png", "type": "image/png", "size": 417094, "path": "Publication:sMolBoxes_2022", "url": "https://www.cg.tuwien.ac.at/research/publications/2022/sMolBoxes_2022/sMolBoxes_2022-teaser.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2022/sMolBoxes_2022/sMolBoxes_2022-teaser:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 5182, "drupal_id": null, "orcid_id": null, "website": null, "firstname": "Pavol", "lastname": 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Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "InfoVis", "drupal_id": 4128, "name": "Information Visualization and Visual Analytics", "short_abstract": "In this research area, our focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning. ", "abstract": "Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
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"files": [ { "description": null, "filetitle": "teaser", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 1604, "image_height": 942, "name": "sMolBoxes_2022-teaser.png", "type": "image/png", "size": 417094, "path": "Publication:sMolBoxes_2022", "url": "https://www.cg.tuwien.ac.at/research/publications/2022/sMolBoxes_2022/sMolBoxes_2022-teaser.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2022/sMolBoxes_2022/sMolBoxes_2022-teaser:thumb{{size}}.png" } ], "projects_workgroups": [], "url": "https://www.cg.tuwien.ac.at/research/publications/2022/sMolBoxes_2022/", "__class": "Publication" }, { "id": "Alharbi_2021", "type_id": "journalpaper_notalk", "tu_id": 300116, "repositum_id": "20.500.12708/138522", "title": "Nanotilus: Generator of Immersive Guided-Tours in Crowded 3D Environments", "date": "2021-12-09", "abstract": "Immersive virtual reality environments are gaining popularity for studying and exploring crowded three-dimensional structures. When reaching very high structural densities, the natural depiction of the scene produces impenetrable clutter and requires visibility and occlusion management strategies for exploration and orientation. Strategies developed to address the crowdedness in desktop applications, however, inhibit the feeling of immersion. They result in nonimmersive, desktop-style outside-in viewing in virtual reality. This paper proposesNanotilus---a new visibility and guidance approach for very dense environments that generates an endoscopic inside-out experience instead of outside-in viewing, preserving the immersive aspect of virtual reality. The approach consists of two novel, tightly coupled mechanisms that control scene sparsification simultaneously with camera path planning. The sparsification strategy is localized around the camera and is realized as a multiscale, multishell, variety-preserving technique. When Nanotilus dives into the structures to capture internal details residing on multiple scales, it guides the camera using depth-based path planning. In addition to sparsification and path planning, we complete the tour generation with an animation controller, textual annotation, and text-to-visualization conversion. We demonstrate the generated guided tours on mesoscopic biological models -- SARS-CoV-2 and HIV viruses. We evaluate the Nanotilus experience with a baseline outside-in sparsification and navigational technique in a formal user study with 29 participants. 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"publ_id": "textures-3d-printing", "field_id": "supervisor", "ordernum": 2 }, { "publ_id": "Thurner-2005-IVR", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "vad_2015_phd", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Viola_Ivan_2013_HQ3", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "Viola-05-Smart", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "viola-2007-ort", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "Viola-Pondering-2017", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "vis-foa", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "waldin-2017-thesis", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Wihann_2017", "field_id": "supervisor", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=171", "__class": "Author" } ], "doi": "10.1109/TVCG.2021.3133592", "first_published": "2021-12-09", "journal": "IEEE Transactions on Visualization and Computer Graphics", "open_access": "yes", "pages_from": "1", "pages_to": "16", "research_areas": [ { "id": "BioVis", "drupal_id": 4127, "name": "Biological Data Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" }, { "id": "VR", "drupal_id": 4126, "name": "Virtual Reality", "short_abstract": "In this area, we focus on user experiences and rendering algorithms for virtual reality environments, including methods to navigate and collaborate in VR, foveated rendering, exploit human perception and simulate visual deficiencies.
", "abstract": "In this area, we focus on user experiences and rendering algorithms for virtual reality environments, including methods to navigate and collaborate in VR, foveated rendering, exploit human perception and simulate visual deficiencies.
", "website": "https://www.cg.tuwien.ac.at/research/area/VR", "teaser": null, "workgroups": [ "rend", "vis" ], "publications": [ "adolf-2019-jug", "Alharbi_2021", "Bayer_Alexander_2021_FTiVR", "Goellner_2019-ABC", "hladky-2022-QS", "Kan_Peter-2021-MDPI", "kan-2019-dli", "Kathi-2018-VRB", "Kovacs_2020", "Kroesl_2020_11_09", "kroesl-2019-MoD", "KROESL-2020-SVI", "kroesl-2020-XREye", "Luidolt-2020-DA", "luidolt-2020-lightperceptionVR", "medeiros-2023-gwf", "Mirzaei_Mohammadreza_2020-EVR", "Mortezapoor2021ssc", "panfili-2019-VAVR", "perl_oskar_2021_DVR", "pirch_2021_VRN", "podkosova_2022_bimflexi-vr", "Prossenitsch_2019-1", "reimer-2020-CBG", "reimer-2021-CVR", "Schoenauer_2020_POI", "schuller_reichl-2019-avt", "Sebernegg2020", "sorger-2021-egonet", "Sprung_2021", "Vasylevska2020VRB", "Vonach021" ], "projects": [ "BimFlexi", "d4322", "d9275", "EU U-CREATE", "EvaluARte", "MARG", "Superhumans" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=VR", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [], "files": [ { "description": null, "filetitle": "Image", "main_file": true, "use_in_gallery": true, "access": "public", "image_width": 540, "image_height": 273, "name": "Alharbi_2021-Image.JPG", "type": "image/jpeg", "size": 46269, "path": "Publication:Alharbi_2021", "url": "https://www.cg.tuwien.ac.at/research/publications/2021/Alharbi_2021/Alharbi_2021-Image.JPG", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2021/Alharbi_2021/Alharbi_2021-Image:thumb{{size}}.png" }, { "description": null, "filetitle": "Paper", "main_file": true, "use_in_gallery": true, "access": "public", "name": "Alharbi_2021-Paper.pdf", "type": "application/pdf", "size": 14837965, "path": "Publication:Alharbi_2021", "url": "https://www.cg.tuwien.ac.at/research/publications/2021/Alharbi_2021/Alharbi_2021-Paper.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2021/Alharbi_2021/Alharbi_2021-Paper:thumb{{size}}.png" } ], "projects_workgroups": [ { "id": "vis", "drupal_id": 1354, "name": "Visualization Group", "website": "https://www.cg.tuwien.ac.at/group/Visualization-Group", "projects": [ "ADAPT", "AngioVis", "Animated Cell Tab development", "AutARG", "avr", "BioNetIllustration", "COMRADE", "d4328", "d4335", "d4534", "d9275", "d9282", "d9522", "d9555", "deskollage", "diagvis", "exvisation", "Illustrare", "illvisation", "KASI", "ManyViews", "NeuroViewer", "ProcessIllVis", "ProKeyAnim", "PVG", "Scale-VS", "Scenario Pool", "Semantic Steering", "Sim-CT", "Smart-CT", "Smile Analytics", "ViMaL", "VISAR" ], "research_areas": [ "BioVis", "IllVis", "InfoVis", "MedVis", "NetVis", "Perception", "VisMat", "VR" ], "publications": [ "2013_Viola_Ivan_2013_MTS", "2015-image-coll", "2017-kouril-illcell", "2019-ic", "AA2020", "alacruzECR2004", "alacruzVisSym2004", "Alharbi_2021", "Alsallakh_2012_RCW", "alsallakh-2009-iva", "altendorfer-2008-vts", "amabili2021", "amirkhanov_2012", "amirkhanov_2012heur", "amirkhanov-2011", "amirkhanov-2014-ama", "amirkhanov-2018-withteeth", "amirkhanov-2021-diss", "amirkhanov2010AMA", "ammer-2008-lst", "An-2018-CHI", "AndreUrsits_2013_APP", "antes-2023-vhv", "Antonini2020", "arbesser_ba_2023", "Artner-2004-Hig", "Artner-2005-Hig", "Artner-2005-Thesis", "audioflow", "Auzinger_Mistelbauer_2013_CSR", "balabanian-2007-ant", "balabanian-2008-hvv", "Balabanian-2010-IIV", "Balabanian-2010-PSDSV", "Balduz_01", "Basch_2011_ATA", "Bauer_David_2018", "Bauer_Johannes_2014_IWB", "bauer-2015-cbfd", "Bayat_2019", "bayer-2015-gapaot", "bbeer-2013", "Bechtold2020", "Beer_2011_DVE", "Beham_Michael_PSC", "beham-2014-cupid", "bernhard-2006-dvrcta", "bernhard-2014-GTOM", "bernhard-2016-gft", "Bernold_2019", "bernold-2019-epr", "bhore-2021-issac", "birkeland_aasmund_2014_pums", "Birkeland-2012-IMC", "BirsakHanzl-2009", "boeroendy-2022-uio", "boesch_2014_browserHistoryVis", "borgo-2013-gly", "borondy2022", "bouzari-thesis", "Brandorff-08-OV", "brandorff-2009-erv", "brandstaetter_01", "brandstaetter-2007-vosd", "Brandstaetter2020", "breitenecker-2020-bct", "bront-2023-svo", "brucker-2010-RES", "Bruckner_Stefan_2015_VAS", "bruckner-2004-EVV", "bruckner-2005-AIV", "bruckner-2005-ATI", "bruckner-2005-ICV", "bruckner-2005-vid", "bruckner-2005-VIS", "bruckner-2006-EVV", "bruckner-2006-ICE", "bruckner-2007-EDF", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2008-IVV", "bruckner-2009-BVQ", "bruckner-2009-IVV", "bruckner-2010-HVC", "bruckner-2010-IFC", "bruckner-2010-ISM", "bruckner-2010-SES", "Bruckner-2012-VEA", "buerger_raphael_2006_3dpoly", "Buerger-2007-cmv", "Buerger-2007-eurovis", "buerger-2007-star", "bugnar-esk-2021", "burns-2007-fea", "bydlinski-2015-gapaot", "byska-2019-mdfc", "Cai_2018", "Caic2021", "Carata_2011_IVE", "carbesser-2013", "casellato-2016-pkg", "cellVIEW_2015", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "Cornel_Daniel_2015_VOC", "Cornel2016CFM", "coto-2005-MAC", "Cruz-thesis", "Csebfalvi-2002-FPVF", "Csebfalvi-2002-SBICG", "Csebfalvi-2002-Smo", "Csebfalvi-2012-IOM", "Csuk_2011", "daae-lampe-2010-dif", "dataset-christmastree", "dataset-present", "dataset-stagbeetle", "Deutsch-2018", "Dhanoa_2021", "Diehl_2015", "Diehl_2021", "Diehl-2017-Albero", "Dietrich_1", "dietrich-2016-viseq2", "diss-thesis-bratislava", "diss-thesis-magdeburg", "diss-thesis-siegen", "djuric-2020-wvo", "donabauer_2019_1", "donabauer-2015-asc", "draeger-2005-chain", "dworschak-2016-szcm", "dworschak-2016-szcm", "Eckelt_2017", "Eckelt_2018_01", "Edi_2019_10_01", "edlinger-2018-vwr", "eg-tut2005-iv", "Ehlers_PhD", "ehlers-2023-iro", "ehlers-thesis", "Eichner2022", "eiweck-hnv-2021", "emsenhuber-2008-vhd", "eschner-2023-evl", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Essler2022", "EuroVis2018-ShortPapers-Karall", "EuroVis2018-ShortPapers-Reiter", "facial2004", "Fechter_2011_DBS", "filipovic-2014-dect", "FISCHL-2012-CTASEG", "fmistelbauer-2014-ad", "fmistelbauer-2014-adict", "Ford-2012-HRV", "fourousan2021", "freiler-2008-ste", "fritz-2009-ieq", "Froehler_Berhnard_2015_ESM", "froschauer-2009-iod", "Fruehstueck_Anna_2015_DOM", "fuchs_raphael_2007_par", "fuchs_vhml", "fuchs-2008-del", "fuchs-vortex", "furmanova_2020", "gadllah_2016", "Gadllah_Hani_2016", "gall_2016", "Gall_2017", "gall_alexander_2016BA", "Gall2020", "Gall2021", "gangl-2018-gpsart", "Ganglberger-2022-cg", "ganglberger2019", "Ganuza", "Ganuza_2015", "Ganuza_MJ_2015_AVe", "Ganuza_ML_2015_ISA", "Ganuza-2017-IVCSGM", "Gavrilescu_2011_VGP", "gavrilescu-2008-vsc", "gavrilescu-2009-postrend", "Gavrilescu-2010-CIE", "Gehrer_Daniel_CUI", "Gehrer-2017", "Gehrer-2017-molmach", "georgiev-2019-cbg", "gerl-2006-vhi", "geymayer-2017-std", "Gietl_2020", "Gillmann2021", "glanznig-2009-LAMC", "glinzner-2016-tex", "Gogel2020", "gostler-2015-3dp", "grammatikaki-thesis", "grimm-2004-arefined", "GRIMM-2004-FDMX-P", "grimm-2004-memory", "GRIMM-2004-PPC", "grimm-2004-volume", "Groeller_2011_CVC", "Groeller_2011_CW", "Groeller_2011_GBC", "Groeller_2011_HP", "Groeller_2011_HSU", "Groeller_2011_IPV", "Groeller_2011_IVP", "Groeller_2011_NR", "Groeller_2011_NSM", "Groeller_2011_VCD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSS", "Groeller_2012_KAV", "Groeller_2012_VBP", "Groeller_2012_ViV", "Groeller_2012_VV", "Groeller_2014_CaQ", "Groeller_2014_CQV", "Groeller_2014_CV", "Groeller_2014_RWA", "Groeller_2014_STC", "Groeller_2014_UPS", "Groeller_2014_VND", "Groeller_2016_I2", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2016_P7", "Groeller_2021_11", "Groeller_2021_BVM", "Groeller_2021-10", "Groeller_Edi_2013_TVC", "Groeller_Edi_2013_VCQ", "Groeller_Edi_2013TVCK", "Groeller_Edi_VKA", "Groeller_Eduard_2014_THS", "Groeller_Eduard_2014_TSP", "Groeller_Eduard_2014_UCT", "Groeller_Eduard_2015_SMV", "Groeller_Eduard_2015_TCU", "Groeller_V1_2020", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V42020", "Groeller_V5_2020", "groeller-2004-efficient", "groeller-2004-imp", "groeller-2004-sci", "groeller-2005-dia", "Groeller-2010-CVC", "Groeller-2010-IFI", "Groeller-2010-IVVI", "Groeller-2011-HSH", "Groeller-2017-ARTORW", "Groeller-2017-AVC", "Groeller-2017-IVAMCS", "Groeller-2017-PTPMD", "Groller_2021-12-03", "Gronde_2008", "Grorller-2010-IVV", "grossmann_2019_pelvisrunner_poster", "Grossmann_MA", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "grossmann-thesis", "Gruenauer-2011-CAT", "Gschwantner_2011_AMQ", "gundacker-2020-wlm", "Gurbat_2011_SBS", "gusenbauer-2018", "gusenbauer-2018", "gusenbauer-2018-P", "gutekunst_2019", "Hadwiger-2002-Fas", "haidacher_2010_statTF", "haidacher-2004-FVV", "haidacher-2005-MND", "haidacher-2007-idr", "haidacher-2008-vcbm", "haidacher-2011-MSM", "haidacher-2011-phd", "haidacher-2011-VAM", "Hainoun2019", "Halladjian_2020", "hanzl-2011", "hartl-2008-vcd", "hartmann-2005-adv", "haushofer-2018-skinning", "Heim_2020", "Heim_2021", "Heim-2017", "heim-gall-2020-dde", "heinzl_2006_RSDVCDM", "heinzl-2006-rep", "heinzl-2008-sam", "Heinzl2021", "Herghelegiu-2012-BPV", "herzberger-2023-swv", "herzberger-2024-roh", "Hirsch_Christian_2015_ABL", "Hladuvka-2002-Exp", "hladuvka-2002-exploiting", "Hochmayr_Manuel_2015_PSE", "hochmayr_manuel-2011-VoRMD", "Hochpoechler_2016_VR", "horvath-2018-ism", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "irger-2023-ves", "Ismail-2018", "jank-2022-cbf", "Kanitsar-2002-CPR", "Kanitsar-2003-Adva", "Kanitsar-2003-Dem", "Kanitsar-2004-Dia", "Kanitsar-thesis", "kapferer-2017-godot", "Karall2017CVAB", "Karall2018_2", "karimov-2013-vivisection", "karimov-2015-HD", "karimov-2016-GIVE", "karimov-2016-SD", "keglevic_schulz-2011-MB", "Kehrer-2008-hyp", "Kehrer-2010-mom", "kehrer-2011-vai", "kehrer-2012-mod", "kehrer-2013-IVA", "kehrer-2013-SBC", "Kehrer-2013-STAR", 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"zechmeister2020", "Zeng_2021", "Zhu-2014-flowvis" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Workgroup&id=vis", "__class": "Workgroup" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2021/Alharbi_2021/", "__class": "Publication" }, { "id": "kouril-2021-molecumentary", "type_id": "journalpaper", "tu_id": 300120, "repositum_id": "20.500.12708/138523", "title": "Molecumentary: Adaptable Narrated Documentaries Using Molecular Visualization", "date": "2021-11-25", "abstract": "We present a method for producing documentary-style content using real-time scientific visualization. We introduce molecumentaries, i.e., molecular documentaries featuring structural models from molecular biology, created through adaptable methods instead of the rigid traditional production pipeline. Our work is motivated by the rapid evolution of scientific visualization and it potential in science dissemination. Without some form of explanation or guidance, however, novices and lay-persons often find it difficult to gain insights from the visualization itself. We integrate such knowledge using the verbal channel and provide it along an engaging visual presentation. To realize the synthesis of a molecumentary, we provide technical solutions along two major production steps: (1) preparing a story structure and (2) turning the story into a concrete narrative. In the first step, we compile information about the model from heterogeneous sources into a story graph. We combine local knowledge with external sources to complete the story graph and enrich the final result. In the second step, we synthesize a narrative, i.e., story elements presented in sequence, using the story graph. We then traverse the story graph and generate a virtual tour, using automated camera and visualization transitions. We turn texts written by domain experts into verbal representations using text-to-speech functionality and provide them as a commentary. Using the described framework, we synthesize fly-throughs with descriptions: automatic ones that mimic a manually authored documentary or semi-automatic ones which guide the documentary narrative solely through curated textual input.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "overview", "main_file": false, "use_in_gallery": false, "access": "public", "image_width": 943, "image_height": 399, "name": "kouril-2021-molecumentary-overview.png", "type": "image/png", "size": 224541, "path": "Publication:kouril-2021-molecumentary", "url": "https://www.cg.tuwien.ac.at/research/publications/2021/kouril-2021-molecumentary/kouril-2021-molecumentary-overview.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2021/kouril-2021-molecumentary/kouril-2021-molecumentary-overview:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1383, "drupal_id": 1132, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/DavidKouřil", "firstname": "David", "lastname": "Kouřil", "searchname": "David Kouřil", "is_teacher": false, "name": "David Kouřil", "publications": [ "2017-kouril-illcell", "Alharbi_2021", "dvdkouril_xmas_card_2018", "Halladjian_2020", "koch_bernhard_2018-1", "Kouril_2017_11", "kouril_2022_paper", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2018-LoL", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Miao_2019", "mindek-2017-marion", "mindek-2017-virtualcell", "Sarkis_2021", "wu-2021", "wu-2021-vi" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "haushofer-2018-skinning", "field_id": "co_supervisor", "ordernum": 0 }, { "publ_id": "koch-2018-sso", "field_id": "co_supervisor", "ordernum": 0 }, { "publ_id": "kouril-2018-LoL", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "kouril-2020-hyperlabels", "field_id": "lecturer", 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develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. 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"wu-2019-visworkshop", "wu-2020-tvcg", "wu-2021", "wu-2021-vi", "xmastree2002", "xmastree2005", "ymca", "YOGHOURDJIAN2019", "Zambal-2003-SWA", "zambal-2005-3dact", "Zaufel_2021", "zauner-2013-svkinect", "zechmeister2020", "Zeng_2021", "Zhu-2014-flowvis" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Workgroup&id=vis", "__class": "Workgroup" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2021/kouril-2021-molecumentary/", "__class": "Publication" }, { "id": "kouril-2021-phdthesis", "type_id": "phdthesis", "tu_id": null, "repositum_id": "20.500.12708/17725", "title": "Interactive Visualization of Dense and Multi-Scale Data for Science Outreach", "date": "2021-04", "abstract": "This thesis focuses on the problem of navigating complex 3D models composed of large numbers of molecular instances packed densely in the three-dimensional space. Due to the large environment encompassing several magnitudes of scale, the traditional navigational paradigms applied in real-time computer graphics are becoming insufficient when applied to biological environments. In the first part of the thesis, I analyze navigation challenges presented by such a use case and recognize several modes of navigation that can be employed when interfacing a complex 3D visualization system with the end-user. We discuss three such modes of navigation: augmentive, declarative, and automative. First, in augmentive navigation, the user is given fully manual control over all aspects of navigation, such as controlling the camera's position and rotation, or the visibility of the individual model's parts. Their manual exploration is, however, augmented by automatically deployed annotation to help make sense of the environment. In declarative navigation, the user interaction is simplified to declaring their target. The visualization system then takes over the low-level controls of the visualization, e.g., camera path animation and scene visibility transition, which are computed to navigate the user directly to their declared target. The third stage, automative navigation, relieves the user from even this responsibility and places the choice of what gets shown to an algorithmic solution. In this case, such automated fly-through can then be guided by a specific storyline. In the second part of the thesis, I present specific methods addressing technical gaps and contributing to realizing the navigational stages presented in the first part. I start by introducing an approach for textual labeling of multi-scale molecular models inspired by the level-of-detail concept. That way, a scenario of augmentive navigation is provided. Second, I propose a navigational method for traversing a dense molecular model with a hierarchical organization, implementing the declarative navigation concept. The presented method uses textual labels for browsing the three-dimensional model, essentially providing a way of traversing the hierarchical organization and exploring the spatial characteristics of the model. Finally, I propose a pipeline for producing automated tours of molecular models, demonstrating the automative navigation mode.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "teaser", "main_file": true, "use_in_gallery": true, "access": "public", "image_width": 2854, "image_height": 1266, "name": "kouril-2021-phdthesis-teaser.png", "type": "image/png", "size": 4190080, "path": "Publication:kouril-2021-phdthesis", "url": "https://www.cg.tuwien.ac.at/research/publications/2021/kouril-2021-phdthesis/kouril-2021-phdthesis-teaser.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2021/kouril-2021-phdthesis/kouril-2021-phdthesis-teaser:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1383, "drupal_id": 1132, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/DavidKouřil", "firstname": "David", "lastname": "Kouřil", "searchname": "David Kouřil", "is_teacher": false, "name": "David Kouřil", "publications": [ "2017-kouril-illcell", "Alharbi_2021", "dvdkouril_xmas_card_2018", "Halladjian_2020", "koch_bernhard_2018-1", "Kouril_2017_11", "kouril_2022_paper", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2018-LoL", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Miao_2019", "mindek-2017-marion", "mindek-2017-virtualcell", "Sarkis_2021", "wu-2021", "wu-2021-vi" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "haushofer-2018-skinning", "field_id": "co_supervisor", "ordernum": 0 }, { "publ_id": "koch-2018-sso", "field_id": "co_supervisor", "ordernum": 0 }, { "publ_id": "kouril-2018-LoL", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "kouril-2020-hyperlabels", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "kouril-2021-molecumentary", "field_id": "lecturer", "ordernum": 0 } ], "url": 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"website": "http://isgwww.cs.uni-magdeburg.de/isg/bernhard.html", "firstname": "Bernhard", "lastname": "Preim", "searchname": "Bernhard Preim", "is_teacher": false, "name": "Bernhard Preim", "publications": [ "bruckner-2010-IFC", "eg-tut2005-iv", "Gillmann2021", "lawonn-2018-illvisstar", "lee-2022-p", "miao_tvcg_2017", "Muigg-2008-four", "preim-2009-sve", "preim-2023-vva", "raidou_2020Onc", "raidou_star2019", "tut-eg-2006", "tut-vis-2006", "Viola-vistutillustrativevis" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "amirkhanov-2021-diss", "field_id": "reviewer_2", "ordernum": 0 }, { "publ_id": "Groeller_2016_P4", "field_id": "lecturer", "ordernum": 1 }, { "publ_id": "karimov-2016-GIVE", "field_id": "reviewer_2", "ordernum": 0 }, { "publ_id": "kouril-2021-phdthesis", "field_id": "reviewer_2", "ordernum": 0 }, { "publ_id": "schlachter-2022-vcm", "field_id": "reviewer_2", "ordernum": 0 } ], "url": 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research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", 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"boeroendy-2022-uio", "boesch_2014_browserHistoryVis", "borgo-2013-gly", "borondy2022", "bouzari-thesis", "Brandorff-08-OV", "brandorff-2009-erv", "brandstaetter_01", "brandstaetter-2007-vosd", "Brandstaetter2020", "breitenecker-2020-bct", "bront-2023-svo", "brucker-2010-RES", "Bruckner_Stefan_2015_VAS", "bruckner-2004-EVV", "bruckner-2005-AIV", "bruckner-2005-ATI", "bruckner-2005-ICV", "bruckner-2005-vid", "bruckner-2005-VIS", "bruckner-2006-EVV", "bruckner-2006-ICE", "bruckner-2007-EDF", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2008-IVV", "bruckner-2009-BVQ", "bruckner-2009-IVV", "bruckner-2010-HVC", "bruckner-2010-IFC", "bruckner-2010-ISM", "bruckner-2010-SES", "Bruckner-2012-VEA", "buerger_raphael_2006_3dpoly", "Buerger-2007-cmv", "Buerger-2007-eurovis", "buerger-2007-star", "bugnar-esk-2021", "burns-2007-fea", "bydlinski-2015-gapaot", "byska-2019-mdfc", "Cai_2018", "Caic2021", "Carata_2011_IVE", "carbesser-2013", "casellato-2016-pkg", "cellVIEW_2015", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "Cornel_Daniel_2015_VOC", "Cornel2016CFM", "coto-2005-MAC", "Cruz-thesis", "Csebfalvi-2002-FPVF", "Csebfalvi-2002-SBICG", "Csebfalvi-2002-Smo", "Csebfalvi-2012-IOM", "Csuk_2011", "daae-lampe-2010-dif", "dataset-christmastree", "dataset-present", "dataset-stagbeetle", "Deutsch-2018", "Dhanoa_2021", "Diehl_2015", "Diehl_2021", "Diehl-2017-Albero", "Dietrich_1", "dietrich-2016-viseq2", "diss-thesis-bratislava", "diss-thesis-magdeburg", "diss-thesis-siegen", "djuric-2020-wvo", "donabauer_2019_1", "donabauer-2015-asc", "draeger-2005-chain", "dworschak-2016-szcm", "dworschak-2016-szcm", "Eckelt_2017", "Eckelt_2018_01", "Edi_2019_10_01", "edlinger-2018-vwr", "eg-tut2005-iv", "Ehlers_PhD", "ehlers-2023-iro", "ehlers-thesis", "Eichner2022", "eiweck-hnv-2021", "emsenhuber-2008-vhd", "eschner-2023-evl", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Essler2022", "EuroVis2018-ShortPapers-Karall", "EuroVis2018-ShortPapers-Reiter", "facial2004", "Fechter_2011_DBS", "filipovic-2014-dect", "FISCHL-2012-CTASEG", "fmistelbauer-2014-ad", "fmistelbauer-2014-adict", "Ford-2012-HRV", "fourousan2021", "freiler-2008-ste", "fritz-2009-ieq", "Froehler_Berhnard_2015_ESM", "froschauer-2009-iod", "Fruehstueck_Anna_2015_DOM", "fuchs_raphael_2007_par", "fuchs_vhml", "fuchs-2008-del", "fuchs-vortex", "furmanova_2020", "gadllah_2016", "Gadllah_Hani_2016", "gall_2016", "Gall_2017", "gall_alexander_2016BA", "Gall2020", "Gall2021", "gangl-2018-gpsart", "Ganglberger-2022-cg", "ganglberger2019", "Ganuza", "Ganuza_2015", "Ganuza_MJ_2015_AVe", "Ganuza_ML_2015_ISA", "Ganuza-2017-IVCSGM", "Gavrilescu_2011_VGP", "gavrilescu-2008-vsc", "gavrilescu-2009-postrend", "Gavrilescu-2010-CIE", "Gehrer_Daniel_CUI", "Gehrer-2017", "Gehrer-2017-molmach", "georgiev-2019-cbg", "gerl-2006-vhi", "geymayer-2017-std", "Gietl_2020", "Gillmann2021", "glanznig-2009-LAMC", "glinzner-2016-tex", "Gogel2020", "gostler-2015-3dp", "grammatikaki-thesis", "grimm-2004-arefined", "GRIMM-2004-FDMX-P", "grimm-2004-memory", "GRIMM-2004-PPC", "grimm-2004-volume", "Groeller_2011_CVC", "Groeller_2011_CW", "Groeller_2011_GBC", "Groeller_2011_HP", "Groeller_2011_HSU", "Groeller_2011_IPV", "Groeller_2011_IVP", "Groeller_2011_NR", "Groeller_2011_NSM", "Groeller_2011_VCD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSS", "Groeller_2012_KAV", "Groeller_2012_VBP", "Groeller_2012_ViV", "Groeller_2012_VV", "Groeller_2014_CaQ", "Groeller_2014_CQV", "Groeller_2014_CV", "Groeller_2014_RWA", "Groeller_2014_STC", "Groeller_2014_UPS", "Groeller_2014_VND", "Groeller_2016_I2", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2016_P7", "Groeller_2021_11", "Groeller_2021_BVM", "Groeller_2021-10", "Groeller_Edi_2013_TVC", "Groeller_Edi_2013_VCQ", "Groeller_Edi_2013TVCK", "Groeller_Edi_VKA", "Groeller_Eduard_2014_THS", "Groeller_Eduard_2014_TSP", "Groeller_Eduard_2014_UCT", "Groeller_Eduard_2015_SMV", "Groeller_Eduard_2015_TCU", "Groeller_V1_2020", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V42020", "Groeller_V5_2020", "groeller-2004-efficient", "groeller-2004-imp", "groeller-2004-sci", "groeller-2005-dia", "Groeller-2010-CVC", "Groeller-2010-IFI", "Groeller-2010-IVVI", "Groeller-2011-HSH", "Groeller-2017-ARTORW", "Groeller-2017-AVC", "Groeller-2017-IVAMCS", "Groeller-2017-PTPMD", "Groller_2021-12-03", "Gronde_2008", "Grorller-2010-IVV", "grossmann_2019_pelvisrunner_poster", "Grossmann_MA", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "grossmann-thesis", "Gruenauer-2011-CAT", "Gschwantner_2011_AMQ", "gundacker-2020-wlm", "Gurbat_2011_SBS", "gusenbauer-2018", "gusenbauer-2018", "gusenbauer-2018-P", "gutekunst_2019", "Hadwiger-2002-Fas", "haidacher_2010_statTF", "haidacher-2004-FVV", "haidacher-2005-MND", "haidacher-2007-idr", "haidacher-2008-vcbm", "haidacher-2011-MSM", "haidacher-2011-phd", "haidacher-2011-VAM", "Hainoun2019", "Halladjian_2020", "hanzl-2011", "hartl-2008-vcd", "hartmann-2005-adv", "haushofer-2018-skinning", "Heim_2020", "Heim_2021", "Heim-2017", "heim-gall-2020-dde", "heinzl_2006_RSDVCDM", "heinzl-2006-rep", "heinzl-2008-sam", "Heinzl2021", "Herghelegiu-2012-BPV", "herzberger-2023-swv", "herzberger-2024-roh", "Hirsch_Christian_2015_ABL", "Hladuvka-2002-Exp", "hladuvka-2002-exploiting", "Hochmayr_Manuel_2015_PSE", "hochmayr_manuel-2011-VoRMD", "Hochpoechler_2016_VR", "horvath-2018-ism", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "irger-2023-ves", "Ismail-2018", "jank-2022-cbf", "Kanitsar-2002-CPR", "Kanitsar-2003-Adva", "Kanitsar-2003-Dem", "Kanitsar-2004-Dia", "Kanitsar-thesis", "kapferer-2017-godot", "Karall2017CVAB", "Karall2018_2", "karimov-2013-vivisection", "karimov-2015-HD", "karimov-2016-GIVE", "karimov-2016-SD", "keglevic_schulz-2011-MB", "Kehrer-2008-hyp", "Kehrer-2010-mom", "kehrer-2011-vai", "kehrer-2012-mod", "kehrer-2013-IVA", "kehrer-2013-SBC", "Kehrer-2013-STAR", "Kehrer-2014-CSD", "kimmersdorfer-fancyMaps-2023", "Kinkelin_2009", "Kinkelin-2011-VR", "Kleber-2004-TFE", "klein_2017_IM", "klein_2019_MSA_Poster", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Klein_Tobias_2015TIV", "klein-thesis", "Knapp_2017_CVR", "knapp_michael_2004_MAS", "knapp-2004-semi", "koch_bernhard_2018-1", "koch-2018-sso", "koehle-2013-sgv", "koeppel-2021", "Koeppel2020", "Kohlmann-2007-EBV", "kohlmann-2007-livesync", "kohlmann-2008-lse", "kohlmann-2009-cp", "kohlmann-2009-lssl", "kolesar-ivan-2014-polymers", "Kolter_2021", "Konyha_2013_IVA", "korpitsch_thorsten-2019", "korpitsch-2020-cescg", "Korpitsch-2020-wscg", "korpitsch-2021-lov", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2018-LoL", "kouril-2018-LoL", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kovacs_PhD", "krakhofer-2015", "Krone2016VABC", "kuehschelm-2005-adv", "Kugler_2019", "Kuroko-2020-iV", "Labschuetz_Matthias_2015_JIT", "Labschuetz_Matthias_2016_AHD", "Labschuetz_Matthias_2016_JIT", "Labschuetz_Matthias_2016_JITT", "Lackner_2022", "LaCruz2004", "Ladstaedter-2009-sim", "Langer_Edith_IR1", "Langer_Maximillian_DMV", "Laschober-2018", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lemuzic-mindek-sorger-cgfcc", "Leutschacher_2022", "li-2019-gdc", "lie-2009-cri", "lipp-2017-mgpu", "lipp-2017-vulkan", "lippeck-2022-mna", "liu-2014-ac", "lkoell-2014", "ludwig-2012-MT", "Machegger2018DTI", "magg-2021-dva", "magg2021", "mahler-2021-mdar", "major-2010-mrf", "malan_fluoro", "malik-2007-FP", "malik-2009-CVFA", "malik-thesis", "Manczarski-2016", "Marek06", "Maricic_2013_VFE", "martorell2022", "maruyama-2019-iv", "Masopust_2018", "Masterthesis-Viola", "Matkovic_Kresimir_2015_", "matt-2023-vae", "matt-masterthesis", "Mattausch-2003-ISL", "Mattausch-2003-SIE", "Mattausch-2003-Str", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "Mazza_2020", "Mazza_2021_05", "Melo_2018_11", "Meusburger_2020", "Miao_2015_VCBM", "Miao_2019", "Miao_Haichao_2015_VQC", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_plitvice_2018", "miao_thesis_2019", "miao_tvcg_2017", "miao_tvcg_2018", "miao_tvcg_2018", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Michl_2017_CSV", "mindek_peter-2012-visgroupproj", "mindek_peter-2014-cs_kaust", "mindek-2013-cs_cvut", "mindek-2013-csl", "mindek-2013-pel", "mindek-2014-mcs", "mindek-2014-vivi_cvut", "mindek-2015-mc", "mindek-2015-mctalk", "mindek-2016-utah-talk", "mindek-2017-dsn", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-thesis", "mistelbauer_2013_SIV", "Mistelbauer_2021", "Mistelbauer_Gabriel_2015_NHR", "Mistelbauer_Gabriel_2016", "mistelbauer-2010-pvv", "mistelbauer-2012-cr", "mistelbauer-2012-ssv", "mistelbauer-2013-cfa", "mistelbauer-2015-abvv", "Mitterhofer_2017", "mizuno-2019-eurovis", "Mlejnek_2004_PF", "Mlejnek_2005_AOEPF", "Mlejnek_2006_MVOA", "Mlejnek-2004-Int", "Mlejnek-2004-ITVAC", "Mlinaric-2015-MT", "Moellinger_Christian_IDE2", "moerth_eric-2016-3DF", "moerth-2018-tpose", "monitzer_2008_FluSi", "Morar_2012_ISB", "Muehlbacher_diss_2018", "mueller-2009-ivs", "Muigg_2011_ISI", "Muigg_2011_VC", "Muigg-2008-four", "muigg-2012-svr", "Musleh_PhD", "Neumann-2002-Fea", "nguyen_2020-covid", "Niedermayer_2018", "Novotny_2013_ASVD", "Nowak_2020", "Nowak_2021", "Oancea_2018_1", "Oancea_Stefan_2016_VOT", "Oancea2018OAK", "oeltze-2013-tut", "opitz-2009-cvv", "Ortner_PhD", "Ortner2020", "Pahr_PhD", "pahr-2021-vologram", "pahr-thesis", "Pahr2020", "Pajer_2012_VoM", "Panayotov", "Parzer_2013_IIG", "patel_2009_MC", "patel_daniel_2007_IRSD", "patel-2008-tsa", "patel-2009-evr", "patel-2011-PEA", "Pauschenwein_2022", "Peter_2012_AIV", "Pezenka-2016-MT", "Pfahler_David_2015_IPI", "Pfahler-2016-MT", "PH-2011-LDS", "phd-viola", "Philipp_Hochhauser_2023", "Pilizar_-2020-bachelor", "piringer-2009-hds", "Plank_Pascal_2015_HVP", "plank-2017-sldg", "PMI_AR_2012", "pointner_simon-2020", "polatsek-2018-stv", "polatsek-2018-stv", "Pramerdorfer-2011-PAV", "preim-2009-sve", "Presch_2020", "Priselac2021", "puehringer-2009-sbm", "puenguentzky-2014-ht", "Purchase-2020-gd", "raidou_2018_bladderrunner", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_2020Onc", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_RO2019", "raidou_shonan167", "raidou_slicedice", "raidou_star2019", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2018_rv3", "raidou2018visualflatter", "raidou2019_prsps", "rasch-2016-imgses", "Rau08", "Rautek_Peter_2014_TUC", "Rautek_Peter_2014_VSA", "rautek-2005-dvr", "Rautek-2007-O3D", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-kav", "Rautek-2008-VF", "rautek-2009-vmv", "RAUTEK06", "Rautek06Vis", "Rautek06VMLS", "rautek2010", "Red_Andreas_2015_FFT", "Reh_Andreas_VoP", "reh-2013", "reina-2020-mtv", "Reisacher_Matthias_CPW", "Reisacher2016", "Reiter_2009_IXIA", "Reiter2017CVAP", "Rezk06Vis", "Ribicic_2012_SUS", "Ribicic_2012_VAS", "Ribicic-2010-CRS", "Riegelnegg_2019", "rinortner_susanne-2019-vpicc", "rinortner_susanne-2019-vpicc", "Rippberger_2019", "rippl-2023-atg", "ritzberger-2010-nar", "Ropinski-2012-UBT", "rraidou_clinical", "rraidou_EG17", "rraidou_phdbook", "rsabin-2013", "ruiz-2008-OVR", "ruiz-2008-SEV", "samoul-2019-cnp", "Sanjin_Rados_RV", "Sarkis_2021", "Sbardellati-2019-vcbm", "Sbardellati-2019-vcbm", "sbardellati-2021-eveos", "scharsach-2005-adv", "Schernthaner-2017-MCP", "schindler_2020vis", "Schindler-2022-eurovis", "schindler2020", "schleicher-2011-VLSC", "Schmidlehner_Sandra_SbC", "schmidlehner2021", "schmidt-2011-mt", "schmidt-phd", "schmidt-phd", "schoellhuber-2008-asc", "scholz_2021", "Schrempf_2018", "Schrempf_2020", "SCHUETZ-2023-SIMLOD", "schuh-2018-mesh-blending", "Schulze_Florian_2013_CMI", "schwankl-2013-smis", "seyfert-2017", "shakhova-2023-atp", "sietzen-2019-wnn", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sifuentes-2018-crowd", "SifuentesGangl2017FIS", "sikachev_peter_2010_STLCI", "sikachev_peter-2011-dfc", "sikachev_peter-2011-incshad", "sikachev_peter-2011-metavis", "sikachev_peter-2011-protovis", "sikachev-2010-DFC", "sikachev-2010-ill_vis_vol_ren", "Sippl_Sebastian_EFG", "smiech-2018-tei", "Smisek_Michal_A3D", "Sollboeck_2011_FSS", "sollboeck-2011", "Solteszova-2009-VQN", "solteszova-2010-MOS", "Solteszova2016", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "Soros_AVN_2011", "Soros-AV-2010", "Spechtenhauser_Florian_2016", "spegel-gruenberger-2020", "Spelitz2020", "spoerk-2010-hpgpu", "Stabel_2012_UDM", "stappen_2017_animatedcomic", "Staudacher_2022", "staudacher_florian-2016-topo3d", "stehno-2011-RVD", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "StickmanMax-shoetta-kampfer", "stoff-concepMap-2021", "StrakaVis2004", "stritzel2022", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "suntinger-2008-etet", "suntinger-2008-tet", "Swoboda_Nicolas_VIT", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "termeer-2006-000", "termeer-2007-covicad", "termeer-2008-scmr", "termeer-2008-vis", "termeer-2009-cvc", "termeer-2009-scmr", "textures-3d-printing", "thesis-tekaya", "Thomas-2018", "Thurner-2005-IVR", "toth-2007-ndd", "TR-186-2-05-01", "TR-186-2-05-02", "TR-186-2-05-03", "TR-186-2-05-04", "TR-186-2-05-06", "TR-186-2-05-07", "TR-186-2-05-08", "TR-186-2-06-01", "TR-186-2-06-02", "TR-186-2-06-03", "TR-186-2-06-04", "TR-186-2-07-02", "TR-186-2-07-03", "TR-186-2-07-04", "TR-186-2-07-05", "TR-186-2-07-06", "TR-186-2-07-07", "TR-186-2-07-08", "TR-186-2-07-10", "TR-186-2-07-11", "TR-186-2-07-12", "TR-186-2-08-01", "TR-186-2-08-02", "TR-186-2-08-03", "TR-186-2-08-04", "TR-186-2-08-05", "TR-186-2-08-06", "TR-186-2-08-07", "TR-186-2-08-08", "TR-186-2-08-10", "TR-186-2-08-11", "TR-186-2-08-12", "TR-186-2-08-14", "TR-186-2-09-01", "TR-186-2-15-03", "TR1862162", "Tramberger_2018", "Tramberger2017BCS", "Trautner_Thomas_2014_VAE", "trautner-2018-imd", "trautner-2018-imd", "travnicek-2017-thm", "Trenkwalder-2004-MAR", "Troidl_2019", "Troidl_2021", "Troidl_2022", "turner-aso", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "tweebo-2014", "ulschmid-2024-reo", "unger_2017", "unger-2019_vcp", "Unger2020", "vad_2015_phd", "Vad_Viktor_2015_RVV", "vad-2016-bre", "vaico", "varchola_andrej-2012-fetoscopic", "Vasileva_2022", "Vasileva-2018", "vessel2003", "Viola_2013_IDV", "Viola_Ivan_2013_CAI", "Viola_Ivan_2013_D3D", "Viola_Ivan_2013_DC", "Viola_Ivan_2013_GS", "Viola_Ivan_2013_HQ3", "Viola_Ivan_2013_RMA", "Viola_Ivan_2013_RSb", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_DAC", "Viola_Ivan_IIP", "Viola_Ivan_UVP", "Viola_Ivan_VDP", "Viola-05-Smart", "Viola-2003-GPU", "Viola-2003-Har", "viola-2003-hbn", "Viola-2003-NON", "viola-2004-gbf", "Viola-2004-GPU", "viola-2004-har", "viola-2004-har2", "viola-2004-idv", "viola-2004-imp", "Viola-2004-ImpX", "Viola-2004-ImpX2", "viola-2005-imp", "viola-2006-FoA", "viola-evr", "Viola-Pondering-2017", "viola-popular-article-2006", "Viola-vistutillustrativevis", "vis-foa", "VisWeek-Tutorial-2012-Uncertainty", "vitruvian_2019", "voglreiter-2023-tro", "Vucenovic_2022", "vucini_2006", "vucini_2008_rnp", "vucini_2009", "vucini_erald-2007-FRI", "vucini-2009-phd", "vucini-2011", "Wagner_032017", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2017_FlickerObserver", "Waldin_Nicholas_2017_FlickerObserver", "Waldin_Nicholas_2017_FlickerObserver", "waldin-2017-thesis", "waldin-2019-ccm", "waldin-2019-ccm", "Waldner_2017_11", "Waldner_2017_11", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-af", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2018-ved", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "Waser-2010-WL", "webGPU_aggregateVis-2023", "weiner_2011", "Weissenboeck_2019", "Weissenboeck_2019_PhD", "weissenboeck-2014", "Wihann_2017", "wolf-2023-cc", "Woschizka_2021", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg", "wu-2021", "wu-2021-vi", "xmastree2002", "xmastree2005", "ymca", "YOGHOURDJIAN2019", "Zambal-2003-SWA", "zambal-2005-3dact", "Zaufel_2021", "zauner-2013-svkinect", "zechmeister2020", "Zeng_2021", "Zhu-2014-flowvis" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Workgroup&id=vis", "__class": "Workgroup" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2021/kouril-2021-phdthesis/", "__class": "Publication" }, { "id": "Sarkis_2021", "type_id": "journalpaper_notalk", "tu_id": null, "repositum_id": "20.500.12708/138952", "title": "Multiscale Unfolding: Illustratively Visualizing the Whole Genome at a Glance", "date": "2021-03", "abstract": "We present Multiscale Unfolding, an interactive technique for illustratively visualizing multiple hierarchical scales of DNA in a single view, showing the genome at different scales and demonstrating how one scale spatially folds into the next. The DNA’s extremely long sequential structure—arranged differently on several distinct scale levels—is often lost in traditional 3D depictions, mainly due to its multiple levels of dense spatial packing and the resulting occlusion. Furthermore, interactive exploration of this complex structure is cumbersome, requiring visibility management like cut-aways. In contrast to existing temporally controlled multiscale data exploration, we allow viewers to always see and interact with any of the involved scales. For this purpose we separate the depiction into constant-scale and scale transition zones. Constant-scale zones maintain a single-scale representation, while still linearly unfolding the DNA. Inspired by illustration, scale transition zones connect adjacent constant-scale zones via level unfolding, scaling, and transparency. We thus represent the spatial structure of the whole DNA macro-molecule, maintain its local organizational characteristics, linearize its higher-level organization, and use spatially controlled, understandable interpolation between neighboring scales. We also contribute interaction\ntechniques that provide viewers with a coarse-to-fine control for navigating within our all-scales-in-one-view representations and visual \naids to illustrate the size differences. Overall, Multiscale Unfolding allows viewers to grasp the DNA’s structural composition from \nchromosomes to the atoms, with increasing levels of “unfoldedness,” and can be applied in data-driven illustration and communication. 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"__class": "Publication" }, { "id": "wu-2020-tvcg", "type_id": "journalpaper_notalk", "tu_id": null, "repositum_id": "20.500.12708/140950", "title": "Multi-level Area Balancing of Clustered Graphs", "date": "2020-11-17", "abstract": "We present a multi-level area balancing technique for laying out clustered graphs to facilitate a comprehensive understanding of the complex relationships that exist in various fields, such as life sciences and sociology. Clustered graphs are often used to model relationships that are accompanied by attribute-based grouping information. Such information is essential for robust data analysis, such as for the study of biological taxonomies or educational backgrounds. Hence, the ability to smartly arrange textual labels and packing graphs within a certain screen space is therefore desired to successfully convey the attribute data . Here we propose to hierarchically partition the input screen space using Voronoi tessellations in multiple levels of detail. In our method, the position of textual labels is guided by the blending of constrained forces and the forces derived from centroidal Voronoi cells. The proposed algorithm considers three main factors: (1) area balancing, (2) schematized space partitioning, and (3) hairball management. We primarily focus on area balancing, which aims to allocate a uniform area for each textual label in the diagram. We achieve this by first untangling a general graph to a clustered graph through textual label duplication, and then coupling with spanning-tree-like visual integration. We illustrate the feasibility of our approach with examples and then evaluate our method by comparing it with well-known conventional approaches and collecting feedback from domain experts.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "image", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 256, "image_height": 192, "name": "wu-2020-tvcg-image.png", "type": "image/png", "size": 85239, "path": "Publication:wu-2020-tvcg", "url": "https://www.cg.tuwien.ac.at/research/publications/2020/wu-2020-tvcg/wu-2020-tvcg-image.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2020/wu-2020-tvcg/wu-2020-tvcg-image:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1464, "drupal_id": 1266, "orcid_id": "0000-0003-1028-0010", "website": "https://www.cg.tuwien.ac.at/staff/Hsiang-YunWu", "firstname": "Hsiang-Yun", "lastname": 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modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "InfoVis", "drupal_id": 4128, "name": "Information Visualization and Visual Analytics", "short_abstract": "In this research area, our focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning. ", "abstract": "Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
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"furmanova_2020", "Gadllah_Hani_2016", "Gall2020", "Ganuza_ML_2015_ISA", "georgiev-2019-cbg", "geyer_lukas_2015_prj", "geymayer-2017-std", "Groeller_2011_CW", "Groeller_2011_NR", "Groeller_2014_RWA", "Groeller_2016_P1", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2021-10", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V5_2020", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "gundacker-2020-wlm", "gusenbauer-2018", "gusenbauer-2018-P", "Heim_2021", "heim-gall-2020-dde", "Heinzl2021", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "karnik-09-shapegrammar", "Kehrer-2010-mom", "kehrer-2012-mod", "kehrer-2013-SBC", "Kehrer-2013-STAR", "klaffenboeck-thesis", "Klein_Tobias_2015TIV", "klein-2016-WCL", "koeppel-2021", "Kolter_2021", "Konyha_2013_IVA", "korpitsch-2021-lov", "Kuroko-2020-iV", "Laschober-2018", "li-2019-gdc", "lippeck-2022-mna", "louis-alexandre_dit_petit-frere-2022-veo", "magg2022", "mahler-2021-mdar", 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"waldner-2017-vph", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "webGPU_aggregateVis-2023", "wolf-2023-cc", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-eurovis-star", "wu-2020-tvcg", "ymca", "YOGHOURDJIAN2019" ], "projects": [ "BioNetIllustration", "d9282", "d9522", "deskollage", "Scenario Pool" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=InfoVis", "__class": "ResearchArea" } ], "keywords": [ "Graph drawing", "Voronoi tessellation", "multi-level", "spatially-efficient layout" ], "weblinks": [], "files": [ { "description": null, "filetitle": "image", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 256, "image_height": 192, "name": "wu-2020-tvcg-image.png", "type": "image/png", "size": 85239, "path": "Publication:wu-2020-tvcg", "url": "https://www.cg.tuwien.ac.at/research/publications/2020/wu-2020-tvcg/wu-2020-tvcg-image.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2020/wu-2020-tvcg/wu-2020-tvcg-image:thumb{{size}}.png" }, { "description": null, "filetitle": "paper", "main_file": true, "use_in_gallery": false, "access": "public", "name": "wu-2020-tvcg-paper.pdf", "type": "application/pdf", "size": 48103600, "path": "Publication:wu-2020-tvcg", "url": "https://www.cg.tuwien.ac.at/research/publications/2020/wu-2020-tvcg/wu-2020-tvcg-paper.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2020/wu-2020-tvcg/wu-2020-tvcg-paper:thumb{{size}}.png" }, { "description": null, "filetitle": "video", "main_file": true, "use_in_gallery": false, "access": "public", "name": "wu-2020-tvcg-video.mov", "type": "video/quicktime", "size": 12802528, "path": "Publication:wu-2020-tvcg", "url": "https://www.cg.tuwien.ac.at/research/publications/2020/wu-2020-tvcg/wu-2020-tvcg-video.mov", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2020/wu-2020-tvcg/wu-2020-tvcg-video:thumb{{size}}.png", "video_mp4": "https://www.cg.tuwien.ac.at/research/publications/2020/wu-2020-tvcg/wu-2020-tvcg-video:video.mp4" } ], "projects_workgroups": [ { "id": "BioNetIllustration", "workgroup_id": "vis", "drupal_id": 4196, "name": "BioNetIllustration: User Centric Illustrations of Biological Networks", "name_de": null, "website": null, "status": "active", "short_abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "start_date": "2017-06-21", "end_date": "2019-06-20", "leader_id": 1464, "logo": { "name": "logo.png", "path": "project:BioNetIllustration", "type": "image/png", "size": 16337, "orig_name": "logo.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/BioNetIllustration/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "Horizon 2020", "contract_number": "747985", "comment": null } ], "research_areas": [ "BioVis", "InfoVis" ], "publications": [ "cmolik-2020-tvcg", "kouril-2018-LoL", "mizuno-2019-eurovis", "Purchase-2020-gd", "rinortner_susanne-2019-vpicc", "Sbardellati-2019-vcbm", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg", "YOGHOURDJIAN2019" ], "url": "https://www.cg.tuwien.ac.at/research/projects/BioNetIllustration", "__class": "Project" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2020/wu-2020-tvcg/", "__class": "Publication" }, { "id": "cmolik-2020-tvcg", "type_id": "journalpaper_notalk", "tu_id": null, "repositum_id": "20.500.12708/58318", "title": "Mixed Labeling: Integrating Internal and External Labels", "date": "2020-09-28", "abstract": "In this paper, we present an algorithm capable of mixed labeling of 2D and 3D objects. In mixed labeling, the given objects are labeled with both internal labels placed (at least partially) over the objects and external labels placed in the space around the objects and connected with the labeled objects with straight-line leaders. The proposed algorithm determines the position and type of each label based on the user-specified ambiguity threshold and eliminates overlaps between the labels, as well as between the internal labels and the straight-line leaders of external labels. The algorithm is a screen-space technique; it operates in an image where the 2D objects or projected 3D objects are encoded. In other words, we can use the algorithm whenever we can render the objects to an image, which makes the algorithm fit for use in many domains. The algorithm operates in real-time, giving the results immediately. Finally, we present results from an expert evaluation, in which a professional illustrator has evaluated the label layouts produced with the proposed algorithm.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "image", "main_file": true, "use_in_gallery": true, "access": "public", "image_width": 256, "image_height": 192, "name": "cmolik-2020-tvcg-image.png", "type": "image/png", "size": 47074, "path": "Publication:cmolik-2020-tvcg", "url": "https://www.cg.tuwien.ac.at/research/publications/2020/cmolik-2020-tvcg/cmolik-2020-tvcg-image.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2020/cmolik-2020-tvcg/cmolik-2020-tvcg-image:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1246, "drupal_id": 1184, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/LadislavČmolík-0", "firstname": "Ladislav", "lastname": "Čmolík", "searchname": "Ladislav Čmolík", "is_teacher": false, "name": "Ladislav Čmolík", "publications": [ "cmolik-2020-tvcg", "kouril-2018-LoL", "mindek-2015-mc" ], "publications_first": [], "project_leader": [], "publication_field": [], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1246", "__class": "Author" }, { "id": 1782, "drupal_id": null, "orcid_id": null, "website": null, "firstname": "Václav", "lastname": "Pavlovec", "searchname": "Václav Pavlovec", "is_teacher": false, "name": "Václav Pavlovec", "publications": [ "cmolik-2020-tvcg" ], "publications_first": [], "project_leader": [], "publication_field": [], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1782", "__class": "Author" }, { "id": 1464, "drupal_id": 1266, "orcid_id": "0000-0003-1028-0010", "website": "https://www.cg.tuwien.ac.at/staff/Hsiang-YunWu", "firstname": "Hsiang-Yun", "lastname": "Wu", "searchname": "Hsiang-Yun Wu", "is_teacher": false, "name": "Hsiang-Yun 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and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "InfoVis", "drupal_id": 4128, "name": "Information Visualization and Visual Analytics", "short_abstract": "In this research area, our focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning. ", "abstract": "Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
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"waldner-2017-vph", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "webGPU_aggregateVis-2023", "wolf-2023-cc", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-eurovis-star", "wu-2020-tvcg", "ymca", "YOGHOURDJIAN2019" ], "projects": [ "BioNetIllustration", "d9282", "d9522", "deskollage", "Scenario Pool" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=InfoVis", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [], "files": [ { "description": null, "filetitle": "image", "main_file": true, "use_in_gallery": true, "access": "public", "image_width": 256, "image_height": 192, "name": "cmolik-2020-tvcg-image.png", "type": "image/png", "size": 47074, "path": "Publication:cmolik-2020-tvcg", "url": 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"name_de": null, "website": null, "status": "active", "short_abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
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"drupal_id": null, "orcid_id": null, "website": null, "firstname": "Ivan", "lastname": "Barisic", "searchname": "Ivan Barisic", "is_teacher": false, "name": "Ivan Barisic", "publications": [ "miao_nantech_2019", "miao_nar_2020", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Sbardellati-2019-vcbm" ], "publications_first": [], "project_leader": [], "publication_field": [], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1473", "__class": "Author" } ], "doi": "10.1093/nar/gkaa593", "journal": "Nucleic Acids Research", "research_areas": [ { "id": "BioVis", "drupal_id": 4127, "name": "Biological Data Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" }, { "id": "Modeling", "drupal_id": 4130, "name": "Modeling", "short_abstract": "In this area, we focus on researching methods and algorithms that facilitate creation, representation, analysis and processing of 3D models.", "abstract": "One of the major bottlenecks in the field of computer graphics is the one of content creation, particularly the creation of high-quality 3D geometric models. These models are a demand in many industries, such as entertainment, computer-aided design, urban planning, the fabrication of physical objects, as well as research areas like medical or scientific visualizations and simulations.\n\nWhile rendering - the classical field of computer graphics - has reached very high standards in the recent two decades, the issue of the creation of appropriate digital models is a difficult problem that hardly keeps pace with current demands. Indeed, it is a complex creative process that involves both artistic and technical skills.\n\nTo make this process easier, our goal in this research area is to find new methods and algorithms that facilitate creation, representation, analysis and processing of 3D models.", "website": "https://www.cg.tuwien.ac.at/research/area/Modeling", "teaser": { "name": "teaser.jpg", "path": "research_area:Modeling", "type": "image/jpeg", "size": 190581, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/Modeling/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "rend" ], "publications": [ "AA2020", "Adorjan-2015", "aichner-2016-sadf", "arikan-2013-osn", "birsak-thesis", "Birsak2018-SA", "Brandstaetter2020", "brunner_lukas_2022_ssb", "Caic2021", "clemenz_2019_rosy_fields", "DOG10", "dusberger-2010-msm", "eibens-2021-tsgpmg", "eibensteiner-2021-pmcg", "eibner-2009-gpc", "erler_2024_ppsurf", "erler_philipp-2016-femfluid-prakt", "erler-2020-p2s", "fan-2014-scfl", "ferschin-1992-kons", "fiedler-2009-php", "fleiss-2015-da", "GAHR-2013-AGM", "gamsjaeger-2022-proc", "gersthofer-2016-sosob", "gervautz-1989-sol1", "gervautz-1993-use", "griessmair-1989-def1", "groeller-1992-frac", "groeller-1995-mod", "Groeller-1995-SDC", "Grossfurtner-2023-paego", "Guerrero-2014-GRF", "Guerrero-2014-TPS", "guerrero-2015-lsp", "HECHER-2017-HDY", "hiess-1992-comb", "hofer_kerstin-2023-sketch2model", "honic-2020-w78", "HU-2017-ETM", "HUMMEL-2001-MSE", "Ilcik_2015_LAY", "ilcik-2010-ps", "ilcik-2013-cipmi", "ilcik-2014-cgbpmi", "ilcik-2016-cmssg", "ilcik-2021-xmas", "kapferer_2021_advancing", "karnik-09-shapegrammar", "Kellner-2021-DA", "kendlbacher-2016", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kreuzer-2016-isf", "kuehtreiber-2010-ikph", "leimer_2017_rbpesc", "leimer_2020-cag", "leimer-2016-coan", "leimer-2016-rpe", "leimer-2018-sar", "leimer-2023-ecd", "LEOPOLD-2017-ALG", "LIPP-2007-CGA", "LIPP-2008-IEV", "LIPP-2009-PGL", "LIPP-2009-PGL2", "lipp2011a", "Maierhofer-thesis", "manpreet_kainth-2012-rus", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_thesis_2019", "mindek-xmas-card-2016", "mujadzic-2023-hfp", "musialski-2009-sbfr", "musialski-2010-pfi", "musialski-2010-tof", "musialski-2012-icb", "musialski-2012-sur", "Musialski-2013-ipmum", "musialski-2013-surcgf", "NIEDERREITER-2010-SIM", "Pahr2020", "Parzer_2013_IIG", "pegrisch_2018_uvs", "pogrzebacz-2014-gggm", "preiner_2017_phd", "PUEYO-2019-SCL", "RADAX-2010-LOD", "Radwan_2021_Occ", "rasch-2016-imgses", "recheis-2009-arr", "Reichinger-12", "reisinger-2023-iad", "reisner-2010-ind", "reisner-2011-akgeo", "reitsamer-2008-tsud", "Rumpelnik_Martin-2020-NPR", "scharl-master-thesis", "scholz_2017_bac", "SCHWAERZLER-2017-SBGM", "SIETZEN-2017-BBO", "sifuentes-2018-crowd", "sippl-2014-fss", "sperl-2013-BA", "spitaler-2015-pbi", "steiner_2016_isad", "steiner-2014-da", "steinkellner-2022-dll", "steinschorn-2020-parameter", "steinschorn-2023-p2m", "tobler02_amrmg", "tobler02_mbpls", "Traxler-1996-GAI", "VASILJEVS-2018-PMPL", "Viola_Ivan_2013_RMA", "Viola_Ivan_2013_RSb", "weiner_2011", "WIMMER-2015-CGFC", "WIMMER-2016-FUTURIS", "WIMMER-2020-ASG", "wimmer-2023-acd", "Winkler-2017", "WINKLER-2019-PDG", "Wonka-2003-Ins", "zeiller-1993-coll", "Zotti-2003-AMP", "zotti-2003-ash", "zotti-2006-pla", "zotti-2007-eg" ], "projects": [ "3DSpatialization", "d4388", "EVOCATION", "GAMEWORLD", "Harvest4D", "PAMINA", "Photo-Guide", "REPLICATE", "SCI_BIM", "Wohnen 4.0" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=Modeling", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [ { "href": "https://academic.oup.com/nar/article-pdf/doi/10.1093/nar/gkaa593/33517747/gkaa593.pdf", "caption": null, "description": null, "main_file": 0 } ], "files": [ { "description": null, "filetitle": "", "main_file": false, "use_in_gallery": false, "access": "public", "preview_image_width": 1229, "preview_image_height": 579, "name": "miao_nar_2020-.pdf", "type": "application/pdf", "size": 1444761, "path": "Publication:miao_nar_2020", "preview_name": "miao_nar_2020-:preview.png", "preview_type": "image/png", "preview_size": 391675, "url": "https://www.cg.tuwien.ac.at/research/publications/2020/miao_nar_2020/miao_nar_2020-.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2020/miao_nar_2020/miao_nar_2020-:thumb{{size}}.png" } ], "projects_workgroups": [ { "id": "Illustrare", "workgroup_id": "vis", "drupal_id": 4189, "name": "ILLUSTRARE: Integrative Visual Abstraction of Molecular Data", "name_de": null, "website": null, "status": "active", "short_abstract": "FWF - I 2953-N31\nIntegrative Visual Abstraction of Molecular Data", "abstract": "In many aspects of our modern lives we face the problem of having to make sense of large amounts of data. This applies to scientists trying to make sense of their experiments and simulations, to bankers and traders trying to understand the dynamics of the financial markets, and to large enterprises which need to understand the principles behind demand and supply—to name just a few examples. The basic problem in all these cases is that people need to identify important and/or unexpected features in large simulated or captured datasets. Visualization is the domain that facilitates this process of sense-making by dramatically simplifying the process of obtaining an understanding of the data—by representing data visually and thus amplifying people’s cognition. This inherent capability of (good) visualization techniques to amplify human cognition, however, is no longer enough to be able to make sense of today’s huge datasets. To be able to see the essential aspects we need dedicated mechanisms that abstract away the (unnecessary) detail to, in turn, allow the user of the visualization to focus on the important elements. The crucial problem in this context is that it is impossible to know what is important and what is not in a general way—importance changes based on the research question, on the application domain, on the data size, on the user, on the specific situation, etc. Visualization technology therefore needs to support dynamic change of visual abstraction of the data to reflect these contextual changes. The fundamental research challenge in visualization for us is to get an understanding of what (visual) abstraction really is, what it means, how it can be controlled, and how it is, can be, and should be used in visualization.\n", "start_date": "2017-01-01", "end_date": "2019-12-31", "leader_id": 171, "logo": { "name": "logo.jpg", "path": "project:Illustrare", "type": "image/jpeg", "size": 95116, "orig_name": "logo.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "fwf", "contract_number": "I 2953-N31", "comment": null } ], "research_areas": [ "BioVis", "IllVis" ], "publications": [ "Halladjian_2020", "kouril-2018-LoL", "lawonn-2018-illvisstar", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Viola-Pondering-2017" ], "url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare", "__class": "Project" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2020/miao_nar_2020/", "__class": "Publication" }, { "id": "Halladjian_2020", "type_id": "journalpaper", "tu_id": null, "repositum_id": "20.500.12708/141411", "title": "ScaleTrotter: Illustrative Visual Travels Across Negative Scales", "date": "2020-01", "abstract": null, "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "scale_trotter", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 770, "image_height": 838, "name": "Halladjian_2020-scale_trotter.png", "type": "image/png", "size": 746352, "path": "Publication:Halladjian_2020", "url": "https://www.cg.tuwien.ac.at/research/publications/2020/Halladjian_2020/Halladjian_2020-scale_trotter.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2020/Halladjian_2020/Halladjian_2020-scale_trotter:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1665, "drupal_id": null, "orcid_id": null, "website": null, "firstname": "Sarkis", "lastname": "Halladjian", "searchname": "Sarkis Halladjian", "is_teacher": false, "name": "Sarkis Halladjian", "publications": [ "Halladjian_2020", "kouril-2021-molecumentary", "Sarkis_2021" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "Halladjian_2020", "field_id": "lecturer", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1665", "__class": "Author" }, { "id": 1263, "drupal_id": 863, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/HaichaoMiao", "firstname": "Haichao", "lastname": "Miao", "searchname": "Haichao Miao", "is_teacher": false, "name": "Haichao Miao", "publications": [ "gadllah_2016", "gall_2016", "Halladjian_2020", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_2019", "Miao_Haichao_2015_VQC", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_plitvice_2018", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2017", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Sarkis_2021", "Sbardellati-2019-vcbm", "wu-2019-report", "wu-2021", "wu-2021-vi" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "gall_alexander_2016BA", "field_id": "co_supervisor", "ordernum": 0 }, { "publ_id": "Miao_2015_VCBM", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "miao_tvcg_2017", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "miao_tvcg_2018", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "miao2018Dimsum", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "sbardellati_ba_2018", "field_id": "supervisor", "ordernum": 1 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1263", "__class": "Author" }, { "id": 1383, "drupal_id": 1132, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/DavidKouřil", "firstname": "David", "lastname": "Kouřil", "searchname": "David Kouřil", "is_teacher": false, "name": "David Kouřil", "publications": [ "2017-kouril-illcell", "Alharbi_2021", "dvdkouril_xmas_card_2018", "Halladjian_2020", "koch_bernhard_2018-1", "Kouril_2017_11", "kouril_2022_paper", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2018-LoL", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Miao_2019", "mindek-2017-marion", "mindek-2017-virtualcell", "Sarkis_2021", "wu-2021", "wu-2021-vi" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "haushofer-2018-skinning", "field_id": "co_supervisor", "ordernum": 0 }, { "publ_id": "koch-2018-sso", "field_id": "co_supervisor", "ordernum": 0 }, { "publ_id": "kouril-2018-LoL", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "kouril-2020-hyperlabels", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "kouril-2021-molecumentary", "field_id": "lecturer", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1383", "__class": "Author" }, { "id": 166, "drupal_id": 111, "orcid_id": "0000-0002-8569-4149", "website": "https://www.cg.tuwien.ac.at/staff/EduardGröller", "firstname": "Eduard", "lastname": "Gröller", "searchname": "Eduard Gröller", "is_teacher": true, "name": "Eduard Gröller", "publications": [ "a-2001-ah", "a-2001-ahr", "a-2001-Rec", "Acquisto-1995-DCR", "alacruzECR2004", "Alharbi_2021", "Alsallakh_2012_RCW", "amirkhanov_2012", "amirkhanov_2012heur", "amirkhanov_2013_AMA", "amirkhanov-2011", "amirkhanov-2014-ama", "amirkhanov-2017-cffet", "amirkhanov-2018-withteeth", "amirkhanov-2019-manylands", "amirkhanov2010AMA", "amirkhanov2020visual", "Antonini2020", "Artner-2004-Hig", "Artner-2005-Hig", "Auzinger_Mistelbauer_2013_CSR", "balabanian-2007-ant", "balabanian-2008-hvv", "balabanian-2008-tst", "Balabanian-2010-IIV", "Balabanian-2010-PSDSV", "Bartroli-2002-Pro", "Bartroli-2003-Geo", "Bartroli-2003-Non", "beham-2014-cupid", "Berger_2011_UAE", "Berger-1998-Col", "Berger-2000-Col", "Bruckner_Stefan_2015_VAS", "Bruckner-2003-The", "bruckner-2005-ICV", "bruckner-2005-vid", "bruckner-2005-VIS", "bruckner-2006-EVV", "bruckner-2006-ICE", "bruckner-2007-EDF", "bruckner-2007-STF", "bruckner-2008-IVV", "bruckner-2009-BVQ", "bruckner-2009-IVV", "bruckner-2010-HVC", "bruckner-2010-IFC", "burns-2007-fea", "Carata_2011_IVE", "Castro-1998-TFS", "Cornel_Daniel_2015_VOC", "cornel-2022-wih", "coto-2005-MAC", "Csebfalvi-1999-Fast", "Csebfalvi-1999-MIP", "Csebfalvi-2000-Fas", "Csebfalvi-2000-GELR", "Csebfalvi-2000-Gra", "Csebfalvi-2000-IVRBM", "Csebfalvi-2001-Fas", "Csebfalvi-2001-Int", "Csebfalvi-2001-NPVR", "Csebfalvi-2002-FPVF", "Csebfalvi-2002-SBICG", "Csebfalvi-2002-Smo", "Csebfalvi-2012-IOM", "dataset-stagbeetle", "Dhanoa_2021", "dhanoa-2022-apm", "Diehl_2015", "Diehl_2021", "diehl-2013-VTA", "Diehl-2017-Albero", 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Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", 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"use_in_gallery": false, "access": "public", "name": "Halladjian_2020-paper.pdf", "type": "application/pdf", "size": 14976666, "path": "Publication:Halladjian_2020", "url": "https://www.cg.tuwien.ac.at/research/publications/2020/Halladjian_2020/Halladjian_2020-paper.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2020/Halladjian_2020/Halladjian_2020-paper:thumb{{size}}.png" }, { "description": null, "filetitle": "scale_trotter", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 770, "image_height": 838, "name": "Halladjian_2020-scale_trotter.png", "type": "image/png", "size": 746352, "path": "Publication:Halladjian_2020", "url": "https://www.cg.tuwien.ac.at/research/publications/2020/Halladjian_2020/Halladjian_2020-scale_trotter.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2020/Halladjian_2020/Halladjian_2020-scale_trotter:thumb{{size}}.png" } ], "projects_workgroups": [ { "id": "Illustrare", "workgroup_id": "vis", "drupal_id": 4189, "name": "ILLUSTRARE: Integrative Visual Abstraction of Molecular Data", "name_de": null, "website": null, "status": "active", "short_abstract": "FWF - I 2953-N31\nIntegrative Visual Abstraction of Molecular Data", "abstract": "In many aspects of our modern lives we face the problem of having to make sense of large amounts of data. This applies to scientists trying to make sense of their experiments and simulations, to bankers and traders trying to understand the dynamics of the financial markets, and to large enterprises which need to understand the principles behind demand and supply—to name just a few examples. The basic problem in all these cases is that people need to identify important and/or unexpected features in large simulated or captured datasets. Visualization is the domain that facilitates this process of sense-making by dramatically simplifying the process of obtaining an understanding of the data—by representing data visually and thus amplifying people’s cognition. This inherent capability of (good) visualization techniques to amplify human cognition, however, is no longer enough to be able to make sense of today’s huge datasets. To be able to see the essential aspects we need dedicated mechanisms that abstract away the (unnecessary) detail to, in turn, allow the user of the visualization to focus on the important elements. The crucial problem in this context is that it is impossible to know what is important and what is not in a general way—importance changes based on the research question, on the application domain, on the data size, on the user, on the specific situation, etc. Visualization technology therefore needs to support dynamic change of visual abstraction of the data to reflect these contextual changes. The fundamental research challenge in visualization for us is to get an understanding of what (visual) abstraction really is, what it means, how it can be controlled, and how it is, can be, and should be used in visualization.\n", "start_date": "2017-01-01", "end_date": "2019-12-31", "leader_id": 171, "logo": { "name": "logo.jpg", "path": "project:Illustrare", "type": "image/jpeg", "size": 95116, "orig_name": "logo.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "fwf", "contract_number": "I 2953-N31", "comment": null } ], "research_areas": [ "BioVis", "IllVis" ], "publications": [ "Halladjian_2020", "kouril-2018-LoL", "lawonn-2018-illvisstar", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Viola-Pondering-2017" ], "url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare", "__class": "Project" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2020/Halladjian_2020/", "__class": "Publication" }, { "id": "nguyen_2020-covid", "type_id": "journalpaper", "tu_id": null, "repositum_id": null, "title": "Modeling in the Time of COVID-19: Statistical and Rule-based Mesoscale Models", "date": "2020", "abstract": "We present a new technique for rapid modeling and construction of scientifically accurate mesoscale biological models. Resulting 3D models are based on few 2D microscopy scans and the latest knowledge about the biological entity represented as a set of geometric relationships. Our new technique is based on statistical and rule-based modeling approaches that are rapid to author, fast to construct, and easy to revise. From a few 2D microscopy scans, we learn statistical properties of various structural aspects, such as the outer membrane shape, spatial properties and distribution characteristics of the macromolecular elements on the membrane. This information is utilized in 3D model construction. Once all imaging evidence is incorporated in the model, additional information can be incorporated by interactively defining rules that spatially characterize the rest of the biological entity, such as mutual interactions among macromolecules, their distances and orientations to other structures. These rules are defined through an intuitive 3D interactive visualization and modeling feedback loop. We demonstrate the utility of our approach on a use case of the modeling procedure of the SARS-CoV-2 virus particle ultrastructure. 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Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. 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"sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [], "files": [ { "description": null, "filetitle": "image", "main_file": false, "use_in_gallery": false, "access": "public", "image_width": 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"Smile Analytics", "ViMaL", "VISAR" ], "research_areas": [ "BioVis", "IllVis", "InfoVis", "MedVis", "NetVis", "Perception", "VisMat", "VR" ], "publications": [ "2013_Viola_Ivan_2013_MTS", "2015-image-coll", "2017-kouril-illcell", "2019-ic", "AA2020", "alacruzECR2004", "alacruzVisSym2004", "Alharbi_2021", "Alsallakh_2012_RCW", "alsallakh-2009-iva", "altendorfer-2008-vts", "amabili2021", "amirkhanov_2012", "amirkhanov_2012heur", "amirkhanov-2011", "amirkhanov-2014-ama", "amirkhanov-2018-withteeth", "amirkhanov-2021-diss", "amirkhanov2010AMA", "ammer-2008-lst", "An-2018-CHI", "AndreUrsits_2013_APP", "antes-2023-vhv", "Antonini2020", "arbesser_ba_2023", "Artner-2004-Hig", "Artner-2005-Hig", "Artner-2005-Thesis", "audioflow", "Auzinger_Mistelbauer_2013_CSR", "balabanian-2007-ant", "balabanian-2008-hvv", "Balabanian-2010-IIV", "Balabanian-2010-PSDSV", "Balduz_01", "Basch_2011_ATA", "Bauer_David_2018", "Bauer_Johannes_2014_IWB", "bauer-2015-cbfd", "Bayat_2019", "bayer-2015-gapaot", 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"buerger_raphael_2006_3dpoly", "Buerger-2007-cmv", "Buerger-2007-eurovis", "buerger-2007-star", "bugnar-esk-2021", "burns-2007-fea", "bydlinski-2015-gapaot", "byska-2019-mdfc", "Cai_2018", "Caic2021", "Carata_2011_IVE", "carbesser-2013", "casellato-2016-pkg", "cellVIEW_2015", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "Cornel_Daniel_2015_VOC", "Cornel2016CFM", "coto-2005-MAC", "Cruz-thesis", "Csebfalvi-2002-FPVF", "Csebfalvi-2002-SBICG", "Csebfalvi-2002-Smo", "Csebfalvi-2012-IOM", "Csuk_2011", "daae-lampe-2010-dif", "dataset-christmastree", "dataset-present", "dataset-stagbeetle", "Deutsch-2018", "Dhanoa_2021", "Diehl_2015", "Diehl_2021", "Diehl-2017-Albero", "Dietrich_1", "dietrich-2016-viseq2", "diss-thesis-bratislava", "diss-thesis-magdeburg", "diss-thesis-siegen", "djuric-2020-wvo", "donabauer_2019_1", "donabauer-2015-asc", "draeger-2005-chain", "dworschak-2016-szcm", "dworschak-2016-szcm", "Eckelt_2017", "Eckelt_2018_01", "Edi_2019_10_01", "edlinger-2018-vwr", "eg-tut2005-iv", "Ehlers_PhD", "ehlers-2023-iro", "ehlers-thesis", "Eichner2022", "eiweck-hnv-2021", "emsenhuber-2008-vhd", "eschner-2023-evl", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Essler2022", "EuroVis2018-ShortPapers-Karall", "EuroVis2018-ShortPapers-Reiter", "facial2004", "Fechter_2011_DBS", "filipovic-2014-dect", "FISCHL-2012-CTASEG", "fmistelbauer-2014-ad", "fmistelbauer-2014-adict", "Ford-2012-HRV", "fourousan2021", "freiler-2008-ste", "fritz-2009-ieq", "Froehler_Berhnard_2015_ESM", "froschauer-2009-iod", "Fruehstueck_Anna_2015_DOM", "fuchs_raphael_2007_par", "fuchs_vhml", "fuchs-2008-del", "fuchs-vortex", "furmanova_2020", "gadllah_2016", "Gadllah_Hani_2016", "gall_2016", "Gall_2017", "gall_alexander_2016BA", "Gall2020", "Gall2021", "gangl-2018-gpsart", "Ganglberger-2022-cg", "ganglberger2019", "Ganuza", "Ganuza_2015", "Ganuza_MJ_2015_AVe", "Ganuza_ML_2015_ISA", "Ganuza-2017-IVCSGM", "Gavrilescu_2011_VGP", "gavrilescu-2008-vsc", "gavrilescu-2009-postrend", 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"Groeller_2016_P6", "Groeller_2016_P7", "Groeller_2021_11", "Groeller_2021_BVM", "Groeller_2021-10", "Groeller_Edi_2013_TVC", "Groeller_Edi_2013_VCQ", "Groeller_Edi_2013TVCK", "Groeller_Edi_VKA", "Groeller_Eduard_2014_THS", "Groeller_Eduard_2014_TSP", "Groeller_Eduard_2014_UCT", "Groeller_Eduard_2015_SMV", "Groeller_Eduard_2015_TCU", "Groeller_V1_2020", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V42020", "Groeller_V5_2020", "groeller-2004-efficient", "groeller-2004-imp", "groeller-2004-sci", "groeller-2005-dia", "Groeller-2010-CVC", "Groeller-2010-IFI", "Groeller-2010-IVVI", "Groeller-2011-HSH", "Groeller-2017-ARTORW", "Groeller-2017-AVC", "Groeller-2017-IVAMCS", "Groeller-2017-PTPMD", "Groller_2021-12-03", "Gronde_2008", "Grorller-2010-IVV", "grossmann_2019_pelvisrunner_poster", "Grossmann_MA", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "grossmann-thesis", "Gruenauer-2011-CAT", "Gschwantner_2011_AMQ", "gundacker-2020-wlm", "Gurbat_2011_SBS", "gusenbauer-2018", "gusenbauer-2018", "gusenbauer-2018-P", "gutekunst_2019", "Hadwiger-2002-Fas", "haidacher_2010_statTF", "haidacher-2004-FVV", "haidacher-2005-MND", "haidacher-2007-idr", "haidacher-2008-vcbm", "haidacher-2011-MSM", "haidacher-2011-phd", "haidacher-2011-VAM", "Hainoun2019", "Halladjian_2020", "hanzl-2011", "hartl-2008-vcd", "hartmann-2005-adv", "haushofer-2018-skinning", "Heim_2020", "Heim_2021", "Heim-2017", "heim-gall-2020-dde", "heinzl_2006_RSDVCDM", "heinzl-2006-rep", "heinzl-2008-sam", "Heinzl2021", "Herghelegiu-2012-BPV", "herzberger-2023-swv", "herzberger-2024-roh", "Hirsch_Christian_2015_ABL", "Hladuvka-2002-Exp", "hladuvka-2002-exploiting", "Hochmayr_Manuel_2015_PSE", "hochmayr_manuel-2011-VoRMD", "Hochpoechler_2016_VR", "horvath-2018-ism", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "irger-2023-ves", "Ismail-2018", "jank-2022-cbf", "Kanitsar-2002-CPR", "Kanitsar-2003-Adva", "Kanitsar-2003-Dem", "Kanitsar-2004-Dia", "Kanitsar-thesis", "kapferer-2017-godot", "Karall2017CVAB", "Karall2018_2", "karimov-2013-vivisection", "karimov-2015-HD", "karimov-2016-GIVE", "karimov-2016-SD", "keglevic_schulz-2011-MB", "Kehrer-2008-hyp", "Kehrer-2010-mom", "kehrer-2011-vai", "kehrer-2012-mod", "kehrer-2013-IVA", "kehrer-2013-SBC", "Kehrer-2013-STAR", "Kehrer-2014-CSD", "kimmersdorfer-fancyMaps-2023", "Kinkelin_2009", "Kinkelin-2011-VR", "Kleber-2004-TFE", "klein_2017_IM", "klein_2019_MSA_Poster", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Klein_Tobias_2015TIV", "klein-thesis", "Knapp_2017_CVR", "knapp_michael_2004_MAS", "knapp-2004-semi", "koch_bernhard_2018-1", "koch-2018-sso", "koehle-2013-sgv", "koeppel-2021", "Koeppel2020", "Kohlmann-2007-EBV", "kohlmann-2007-livesync", "kohlmann-2008-lse", "kohlmann-2009-cp", "kohlmann-2009-lssl", "kolesar-ivan-2014-polymers", "Kolter_2021", "Konyha_2013_IVA", "korpitsch_thorsten-2019", "korpitsch-2020-cescg", "Korpitsch-2020-wscg", "korpitsch-2021-lov", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2018-LoL", "kouril-2018-LoL", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kovacs_PhD", "krakhofer-2015", "Krone2016VABC", "kuehschelm-2005-adv", "Kugler_2019", "Kuroko-2020-iV", "Labschuetz_Matthias_2015_JIT", "Labschuetz_Matthias_2016_AHD", "Labschuetz_Matthias_2016_JIT", "Labschuetz_Matthias_2016_JITT", "Lackner_2022", "LaCruz2004", "Ladstaedter-2009-sim", "Langer_Edith_IR1", "Langer_Maximillian_DMV", "Laschober-2018", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lemuzic-mindek-sorger-cgfcc", "Leutschacher_2022", "li-2019-gdc", "lie-2009-cri", "lipp-2017-mgpu", "lipp-2017-vulkan", "lippeck-2022-mna", "liu-2014-ac", "lkoell-2014", "ludwig-2012-MT", "Machegger2018DTI", "magg-2021-dva", "magg2021", "mahler-2021-mdar", "major-2010-mrf", "malan_fluoro", "malik-2007-FP", "malik-2009-CVFA", "malik-thesis", "Manczarski-2016", "Marek06", "Maricic_2013_VFE", "martorell2022", "maruyama-2019-iv", "Masopust_2018", "Masterthesis-Viola", "Matkovic_Kresimir_2015_", "matt-2023-vae", "matt-masterthesis", "Mattausch-2003-ISL", "Mattausch-2003-SIE", "Mattausch-2003-Str", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "Mazza_2020", "Mazza_2021_05", "Melo_2018_11", "Meusburger_2020", "Miao_2015_VCBM", "Miao_2019", "Miao_Haichao_2015_VQC", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_plitvice_2018", "miao_thesis_2019", "miao_tvcg_2017", "miao_tvcg_2018", "miao_tvcg_2018", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Michl_2017_CSV", "mindek_peter-2012-visgroupproj", "mindek_peter-2014-cs_kaust", "mindek-2013-cs_cvut", "mindek-2013-csl", "mindek-2013-pel", "mindek-2014-mcs", "mindek-2014-vivi_cvut", "mindek-2015-mc", "mindek-2015-mctalk", "mindek-2016-utah-talk", "mindek-2017-dsn", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-thesis", "mistelbauer_2013_SIV", "Mistelbauer_2021", "Mistelbauer_Gabriel_2015_NHR", "Mistelbauer_Gabriel_2016", "mistelbauer-2010-pvv", "mistelbauer-2012-cr", "mistelbauer-2012-ssv", "mistelbauer-2013-cfa", "mistelbauer-2015-abvv", "Mitterhofer_2017", "mizuno-2019-eurovis", "Mlejnek_2004_PF", "Mlejnek_2005_AOEPF", "Mlejnek_2006_MVOA", "Mlejnek-2004-Int", "Mlejnek-2004-ITVAC", "Mlinaric-2015-MT", "Moellinger_Christian_IDE2", "moerth_eric-2016-3DF", "moerth-2018-tpose", "monitzer_2008_FluSi", "Morar_2012_ISB", "Muehlbacher_diss_2018", "mueller-2009-ivs", "Muigg_2011_ISI", "Muigg_2011_VC", "Muigg-2008-four", "muigg-2012-svr", "Musleh_PhD", "Neumann-2002-Fea", "nguyen_2020-covid", "Niedermayer_2018", "Novotny_2013_ASVD", "Nowak_2020", "Nowak_2021", "Oancea_2018_1", "Oancea_Stefan_2016_VOT", "Oancea2018OAK", 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"wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg", "wu-2021", "wu-2021-vi", "xmastree2002", "xmastree2005", "ymca", "YOGHOURDJIAN2019", "Zambal-2003-SWA", "zambal-2005-3dact", "Zaufel_2021", "zauner-2013-svkinect", "zechmeister2020", "Zeng_2021", "Zhu-2014-flowvis" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Workgroup&id=vis", "__class": "Workgroup" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2020/nguyen_2020-covid/", "__class": "Publication" }, { "id": "klein_2019_PHD", "type_id": "phdthesis", "tu_id": 284011, "repositum_id": null, "title": "Instant Construction of Atomistic Models for Visualization in Integrative Cell Biology", "date": "2019-11-23", "abstract": "AbstractComputational models have advanced research of integrative cell biology in variousways. Especially in the biological mesoscale, the scale between atoms and cellularenvironments, computational models improve the understanding and qualitative anal-ysis. The mesoscale is an important range, since it represents the range of scalesthat are not fully accessible to a single experimental technique. Complex molecularassemblies within this scale have been visualized with x-ray crystallography, thoughonly in isolation. Mesoscale models shows how molecules are assembled into morecomplex subcelluar environments that orchestrate the processes of life. The skillfulcombination of the results of imaging and experimental techniques provides a glimpseof the processes, which are happening here. Only recently, biologists have startedto unify the various sources of information. They have begun to computationallyassemble and subsequently visualize complex environments, such as viruses or bacteria.Currently, we live in an opportune time for researching integrative structural biologydue to several factors. First and foremost, the wealth of data, driven through sourceslike online databases, makes structural information about biological entities publiclyavailable. In addition to that, the progress of parallel processors builds the foundationto instantly construct and render large mesoscale environments in atomistic detail.Finally, new scientific advances in visualization allow the efficient rendering of complexbiological phenomena with millions of structural units.In this cumulative thesis, we propose several novel techniques that facilitate the instantconstruction of mesoscale structures. The common methodological strategy of thesetechniques and insight from this thesis is “compute instead of store”. This approacheliminates the storage and memory management complexity, and enables instantchanges of the constructed models. Combined, our techniques are capable of instantlyconstructing large-scale biological environments using the basic structural buildingblocks of cells. These building blocks are mainly nucleic acids, lipids, and solubleproteins. For the generation of long linear polymers formed by nucleic acids, wepropose a parallel construction technique that makes use of a midpoint displacementalgorithm. The efficient generation of lipid membranes is realized through a texturesynthesis approach that makes use of the Wang tiling concept. For the population ofsoluble proteins, we present a staged algorithm, whereby each stage is processed inparallel. We have integrated the instant construction approach into a visual environmentin order to improve several aspects. First, it allows immediate feedback on the createdix\nstructures and the results of parameter changes. Additionally, the integration ofconstruction in visualization builds the foundation for visualization systems that striveto construct large-scale environments on-the-fly. Lastly, it advances the qualitativeanalysis of biological mesoscale environments, where a multitude of synthesized modelsis required. In order to disseminate the physiology of biological mesoscale models,we propose a novel concept that simplifies the creation of multi-scale proceduralanimations.\n", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "image", "main_file": true, "use_in_gallery": true, "access": "public", "image_width": 891, "image_height": 439, "name": "klein_2019_PHD-image.JPG", "type": "image/jpeg", "size": 144960, "path": "Publication:klein_2019_PHD", "url": "https://www.cg.tuwien.ac.at/research/publications/2019/klein_2019_PHD/klein_2019_PHD-image.JPG", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2019/klein_2019_PHD/klein_2019_PHD-image:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1285, "drupal_id": 1146, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/TobiasKlein", "firstname": "Tobias", "lastname": "Klein", "searchname": "Tobias Klein", "is_teacher": false, "name": "Tobias Klein", "publications": [ "Alharbi_2021", "klein_2017_IM", "klein_2019_MSA_Poster", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Klein_Tobias_2015TIV", "klein-2016-WCL", "klein-thesis", "koch_bernhard_2018-1", "Miao_2019", "mindek-2017-virtualcell", "mindek-2019-mci", "nguyen_2020-covid", "sorger-2016-fowardabstraction", "wu-2021", "wu-2021-vi" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "Escribano_2017", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Hochpoechler_2016_VR", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "klein_2017_IM", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "klein_2019_PGG", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "klein_2019_PMP", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "Knapp_2017_CVR", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Kugler_2019", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Michl_2017_CSV", "field_id": "supervisor", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1285", "__class": "Author" } ], "co_supervisor": [ { "id": 166, "drupal_id": 111, "orcid_id": "0000-0002-8569-4149", "website": "https://www.cg.tuwien.ac.at/staff/EduardGröller", "firstname": "Eduard", "lastname": "Gröller", "searchname": "Eduard Gröller", "is_teacher": true, "name": "Eduard Gröller", "publications": [ "a-2001-ah", "a-2001-ahr", "a-2001-Rec", "Acquisto-1995-DCR", "alacruzECR2004", "Alharbi_2021", "Alsallakh_2012_RCW", "amirkhanov_2012", "amirkhanov_2012heur", "amirkhanov_2013_AMA", "amirkhanov-2011", "amirkhanov-2014-ama", "amirkhanov-2017-cffet", "amirkhanov-2018-withteeth", "amirkhanov-2019-manylands", "amirkhanov2010AMA", "amirkhanov2020visual", "Antonini2020", "Artner-2004-Hig", "Artner-2005-Hig", "Auzinger_Mistelbauer_2013_CSR", "balabanian-2007-ant", "balabanian-2008-hvv", "balabanian-2008-tst", 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"waldin-2017-thesis", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Wihann_2017", "field_id": "supervisor", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=171", "__class": "Author" } ], "research_areas": [ { "id": "BioVis", "drupal_id": 4127, "name": "Biological Data Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" }, { "id": "Modeling", "drupal_id": 4130, "name": "Modeling", "short_abstract": "In this area, we focus on researching methods and algorithms that facilitate creation, representation, analysis and processing of 3D models.", "abstract": "One of the major bottlenecks in the field of computer graphics is the one of content creation, particularly the creation of high-quality 3D geometric models. These models are a demand in many industries, such as entertainment, computer-aided design, urban planning, the fabrication of physical objects, as well as research areas like medical or scientific visualizations and simulations.\n\nWhile rendering - the classical field of computer graphics - has reached very high standards in the recent two decades, the issue of the creation of appropriate digital models is a difficult problem that hardly keeps pace with current demands. Indeed, it is a complex creative process that involves both artistic and technical skills.\n\nTo make this process easier, our goal in this research area is to find new methods and algorithms that facilitate creation, representation, analysis and processing of 3D models.", "website": "https://www.cg.tuwien.ac.at/research/area/Modeling", "teaser": { "name": "teaser.jpg", "path": "research_area:Modeling", "type": "image/jpeg", "size": 190581, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/Modeling/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "rend" ], "publications": [ "AA2020", "Adorjan-2015", "aichner-2016-sadf", "arikan-2013-osn", "birsak-thesis", "Birsak2018-SA", "Brandstaetter2020", "brunner_lukas_2022_ssb", "Caic2021", "clemenz_2019_rosy_fields", "DOG10", "dusberger-2010-msm", "eibens-2021-tsgpmg", "eibensteiner-2021-pmcg", "eibner-2009-gpc", "erler_2024_ppsurf", "erler_philipp-2016-femfluid-prakt", "erler-2020-p2s", "fan-2014-scfl", "ferschin-1992-kons", "fiedler-2009-php", "fleiss-2015-da", "GAHR-2013-AGM", "gamsjaeger-2022-proc", "gersthofer-2016-sosob", "gervautz-1989-sol1", "gervautz-1993-use", "griessmair-1989-def1", "groeller-1992-frac", "groeller-1995-mod", "Groeller-1995-SDC", "Grossfurtner-2023-paego", "Guerrero-2014-GRF", "Guerrero-2014-TPS", "guerrero-2015-lsp", "HECHER-2017-HDY", "hiess-1992-comb", "hofer_kerstin-2023-sketch2model", "honic-2020-w78", "HU-2017-ETM", "HUMMEL-2001-MSE", "Ilcik_2015_LAY", "ilcik-2010-ps", "ilcik-2013-cipmi", "ilcik-2014-cgbpmi", "ilcik-2016-cmssg", "ilcik-2021-xmas", "kapferer_2021_advancing", "karnik-09-shapegrammar", "Kellner-2021-DA", "kendlbacher-2016", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kreuzer-2016-isf", "kuehtreiber-2010-ikph", "leimer_2017_rbpesc", "leimer_2020-cag", "leimer-2016-coan", "leimer-2016-rpe", "leimer-2018-sar", "leimer-2023-ecd", "LEOPOLD-2017-ALG", "LIPP-2007-CGA", "LIPP-2008-IEV", "LIPP-2009-PGL", "LIPP-2009-PGL2", "lipp2011a", "Maierhofer-thesis", "manpreet_kainth-2012-rus", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_thesis_2019", "mindek-xmas-card-2016", "mujadzic-2023-hfp", "musialski-2009-sbfr", "musialski-2010-pfi", "musialski-2010-tof", "musialski-2012-icb", "musialski-2012-sur", "Musialski-2013-ipmum", "musialski-2013-surcgf", "NIEDERREITER-2010-SIM", "Pahr2020", "Parzer_2013_IIG", "pegrisch_2018_uvs", "pogrzebacz-2014-gggm", "preiner_2017_phd", "PUEYO-2019-SCL", "RADAX-2010-LOD", "Radwan_2021_Occ", "rasch-2016-imgses", "recheis-2009-arr", "Reichinger-12", "reisinger-2023-iad", "reisner-2010-ind", "reisner-2011-akgeo", "reitsamer-2008-tsud", "Rumpelnik_Martin-2020-NPR", "scharl-master-thesis", "scholz_2017_bac", "SCHWAERZLER-2017-SBGM", "SIETZEN-2017-BBO", "sifuentes-2018-crowd", "sippl-2014-fss", "sperl-2013-BA", "spitaler-2015-pbi", "steiner_2016_isad", "steiner-2014-da", "steinkellner-2022-dll", "steinschorn-2020-parameter", "steinschorn-2023-p2m", "tobler02_amrmg", "tobler02_mbpls", "Traxler-1996-GAI", "VASILJEVS-2018-PMPL", "Viola_Ivan_2013_RMA", "Viola_Ivan_2013_RSb", "weiner_2011", "WIMMER-2015-CGFC", "WIMMER-2016-FUTURIS", "WIMMER-2020-ASG", "wimmer-2023-acd", "Winkler-2017", "WINKLER-2019-PDG", "Wonka-2003-Ins", "zeiller-1993-coll", "Zotti-2003-AMP", "zotti-2003-ash", "zotti-2006-pla", "zotti-2007-eg" ], "projects": [ "3DSpatialization", "d4388", "EVOCATION", "GAMEWORLD", "Harvest4D", "PAMINA", "Photo-Guide", "REPLICATE", "SCI_BIM", "Wohnen 4.0" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=Modeling", "__class": "ResearchArea" }, { "id": "Rendering", "drupal_id": 4134, "name": "Rendering", "short_abstract": "In this area, we concentrate on algorithms that synthesize images to depict 3D models or scenes, often by simulating or approximating the physics of light.", "abstract": "The rendering of 3D models and scenes has been a major, long-standing challenge in computer graphics that can be divided into two major subfields. Real-time rendering refers to the real-time synthesis of images on commodity graphics hardware to facilitate interaction for visualizations or computer games. The field of physically based rendering focuses on algorithms that accurately simulate the physics of light for use in the movie industry, architectural visualizations, etc. Compared to real-time rendering methods, these algorithms generally require a considerable amount of time (i.e., hours up to days) to generate acceptable results.\n\nIn the context of real-time rendering, our work revolves around the development of algorithms to achieve higher visual quality. Furthermore, we work on techniques to accelerate physically based rendering algorithms to make them viable for interactive rendering. Another aspect of our research work revolves around tools that facilitate the work of content creators.", "website": "https://www.cg.tuwien.ac.at/research/area/Rendering", "teaser": { "name": "teaser.png", "path": "research_area:Rendering", "type": "image/png", "size": 5244928, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/Rendering/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "rend" ], "publications": [ "2011scherzerE", "2018_Mautner_Praktikum", "Adorjan-2015", "agyemang-2021-bsdfproxyppg", "arikan-2014-pcvis", "arikan-2015-dmrt", "Artusi-2003-Del", "ASCHL-2022-OTV", "Auzinger_2012_AAA", "Auzinger_2012_GeigerCam", "Auzinger_2013_AnaVis", "Auzinger_2013_NSAA", "Auzinger_2013_SAR", "Auzinger_2014_DCGI", "Auzinger_2014_UJA", "Auzinger-2015-IST", "bagar2010", "Bauer_Dominik_2018_VR", "bernhard-2011-bmtf", "bernhard-2014-GTOM", "bhagvat-09-frusta", "birsak-2013-sta", "Bittner-2001-Vis", "Bittner-2003-Vis", "Bittner-2004-CHC", "bittner-2005-egsr", "BITTNER-2009-AGVS", "BITTNER-2009-GEFOC", "bittner-2011-scc", "BOKSANSKY-2019-RTS", "brugger-2020-tdp", "brugger-2020-tsdpbr", "Brusi-2001-Opt", "CADIK-2006-IAQ", "CADIK-2008-EHD", "cardoso-2021-cost", "cardoso-2022-rtpercept", "cech-2023-taa", "celarek_adam-2019-qelta", "CELAREK-2017-QCL", "CHARALAMBOS-2007-HLOD", "charpenay-2014-sgn", "cline-09-poisson", "CORNEL-2017-FRS", "CORNEL-2019-IVF", "Devlin-2002-STA", "dodik-2017-pcbpt", "EISEMANN-2011-RTS", "EISEMANN-2012-ERT", "EISEMANN-2013-ERT", "ERLER-2017-HVR", "ESBERGER-2016-AHO", "ESCHNER-2019-GDT", "fink-2012-cg1", "Fischer-2018-sssvr", "FRAISS-2017-PCU", "FRAISS-2022-CGMM", "freude_2020_rs", "FREUDE-2015-phd", "freude-2023-prh", "freude-2023-sem", "GAMPER-2018-OSG", "GANTNER-2018-ARO", "GANTNER-2019-CRS", "gersthofer_2017_COP", "geyer-2018-apbf", "GIEGL-2006-QVS", "GIEGL-2007-FVS", "GIEGL-2007-QV1", "GIEGL-2007-UNP", "gilmutdinov-2022-aomlbwug", "glanz-2017-pbrcomparison", "GRELAUD-2009-EPA", "GRIESHOFER-2018-GOS", "Groeller_2016_P3", "Grossfurtner-2023-paego", "Gruber2019", "guerrero-2008-sli", "Habel_07_xms", "Habel_08_SSH", "Habel_09_PGT", "Habel_2007_IAG", "Habel_2007_RTT", "Habel_2009_PhD", "Habel_2012_PSP", "Habel_LSN_2011", "Habel_RAV_2010", "Habel-09-RAT", "Habel-09-THB", "Habel-2010-EIN", "HAFNER-2015-FEM", "HANN_2022_IPT", "havran-2005-egsr", "havran-2005-sccg", "havran-2006-tut", "hecher-2012-MH", "hecher-2014-MH", "heinz-2019-psi", "hladky-2022-QS", "hofer_kerstin-2023-sketch2model", "horvath_imp", "houska-2020-IPGM", "huerbe-2019-BA", "intel2016", "JAHRMANN-2013-IGR", "JAHRMANN-2015-GRASS", "JAHRMANN-2016-IGR", "JAHRMANN-2017-RRTG", "jeschke-05-AIP", "jeschke-05-ARI", "jeschke-05-ISTAR", "jeschke-09-praguetalk", "jeschke-09-rendering", "Jeschke-2002-LEMA", "Jeschke-2002-TDMR", "JESCHKE-2007-ISC", "jeschke-2010-diff", "jeschke-2011-est", "Jimenez_SSS_2015", "KAFKA-2014-19MRD", "Kathi-2018-VRB", "Keilman2022", 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mesoscale models provides a glimpse at the inner workings of living cells. One of the most complex components of these models is DNA, which is of fundamental importance for all forms of life. Modeling the 3D structure of genomes has previously only been attempted by sequential approaches. We present the first parallel approach for the instant construction of DNA structures. Traditionally, such structures are generated with algorithms like random walk, which have inherent sequential constraints. These algorithms result in the desired structure, are easy to control, and simple to formulate. Their execution, however, is very time-consuming, as they are not designed to exploit parallelism. 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"167470", "orig_name": "Capture.JPG", "ext": "JPG" }, "date_from": "2019", "date_to": "2019", "doi": "10.1111/cgf.13816", "event": "Pacific Graphics 2109", "journal": "Computer Graphics Forum", "lecturer": [ { "id": 1285, "drupal_id": 1146, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/TobiasKlein", "firstname": "Tobias", "lastname": "Klein", "searchname": "Tobias Klein", "is_teacher": false, "name": "Tobias Klein", "publications": [ "Alharbi_2021", "klein_2017_IM", "klein_2019_MSA_Poster", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Klein_Tobias_2015TIV", "klein-2016-WCL", "klein-thesis", "koch_bernhard_2018-1", "Miao_2019", "mindek-2017-virtualcell", "mindek-2019-mci", "nguyen_2020-covid", "sorger-2016-fowardabstraction", "wu-2021", "wu-2021-vi" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "Escribano_2017", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Hochpoechler_2016_VR", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "klein_2017_IM", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "klein_2019_PGG", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "klein_2019_PMP", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "Knapp_2017_CVR", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Kugler_2019", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Michl_2017_CSV", "field_id": "supervisor", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1285", "__class": "Author" } ], "number": "7", "pages_from": "57", "pages_to": "68", "volume": "38", "research_areas": [ { "id": "BioVis", "drupal_id": 4127, "name": "Biological Data Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" }, { "id": "Modeling", "drupal_id": 4130, "name": "Modeling", "short_abstract": "In this area, we focus on researching methods and algorithms that facilitate creation, representation, analysis and processing of 3D models.", "abstract": "One of the major bottlenecks in the field of computer graphics is the one of content creation, particularly the creation of high-quality 3D geometric models. These models are a demand in many industries, such as entertainment, computer-aided design, urban planning, the fabrication of physical objects, as well as research areas like medical or scientific visualizations and simulations.\n\nWhile rendering - the classical field of computer graphics - has reached very high standards in the recent two decades, the issue of the creation of appropriate digital models is a difficult problem that hardly keeps pace with current demands. Indeed, it is a complex creative process that involves both artistic and technical skills.\n\nTo make this process easier, our goal in this research area is to find new methods and algorithms that facilitate creation, representation, analysis and processing of 3D models.", "website": "https://www.cg.tuwien.ac.at/research/area/Modeling", "teaser": { "name": "teaser.jpg", "path": "research_area:Modeling", "type": "image/jpeg", "size": 190581, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/Modeling/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "rend" ], "publications": [ "AA2020", "Adorjan-2015", "aichner-2016-sadf", "arikan-2013-osn", "birsak-thesis", "Birsak2018-SA", "Brandstaetter2020", "brunner_lukas_2022_ssb", "Caic2021", "clemenz_2019_rosy_fields", "DOG10", "dusberger-2010-msm", "eibens-2021-tsgpmg", "eibensteiner-2021-pmcg", "eibner-2009-gpc", "erler_2024_ppsurf", 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"__class": "Publication" }, { "id": "amirkhanov-2019-manylands", "type_id": "journalpaper", "tu_id": 282817, "repositum_id": null, "title": "ManyLands: A Journey Across 4D Phase Space of Trajectories", "date": "2019-10", "abstract": "Mathematical models of ordinary differential equations are used to describe and understand biological phenomena. These models are dynamical systems that often describe the time evolution of more than three variables, i.e., their dynamics take place in a multi-dimensional space, called the phase space. Currently, mathematical domain scientists use plots of typical trajectories in the phase space to analyze the qualitative behavior of dynamical systems. These plots are called phase portraits and they perform well for 2D and 3D dynamical systems. However, for 4D, the visual exploration of trajectories becomes challenging, as simple subspace juxtaposition is not sufficient. We propose ManyLands to support mathematical domain scientists in analyzing 4D models of biological systems. By describing the subspaces as Lands, we accompany domain scientists along a continuous journey through 4D HyperLand, 3D SpaceLand, and 2D FlatLand, using seamless transitions. The Lands are also linked to 1D TimeLines. We offer an additional dissected view of trajectories that relies on small-multiple compass-alike pictograms for easy navigation across subspaces and trajectory segments of interest. We show three use cases of 4D dynamical systems from cell biology and biochemistry. An informal evaluation with mathematical experts confirmed that ManyLands helps them to visualize and analyze complex 4D dynamics, while facilitating mathematical experiments and simulations.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "Teaser", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 4939, "image_height": 2158, "name": "amirkhanov-2019-manylands-Teaser.png", "type": "image/png", "size": 1836064, "path": "Publication:amirkhanov-2019-manylands", "url": "https://www.cg.tuwien.ac.at/research/publications/2019/amirkhanov-2019-manylands/amirkhanov-2019-manylands-Teaser.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2019/amirkhanov-2019-manylands/amirkhanov-2019-manylands-Teaser:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1170, "drupal_id": 635, "orcid_id": null, "website": 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Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. 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Exploded views are excellently suited to manage visual occlusion of structure components, which is one of the main challenges when visualizing complex 3D data. In this paper, we discuss four key parameters of an exploded view: explosion distance, direction, order, and the selection of explosion components. We propose two strategies, namely the structure-derived exploded view and the interactive free-form exploded view, for computing these four parameters systematically. The first strategy allows scientists to automatically create exploded views by computing the parameters from the given object structures. The second strategy further supports them to design and customize detailed explosion paths through user interaction. Our approach features the possibility to animate exploded views, to incorporate ease functions into these animations and to display the explosion path of components via arrows. Finally, we demonstrate three use cases with various challenges that we investigated in collaboration with a domain scientist. Our approach, therefore, provides interesting new ways of investigating and presenting the design layout and composition of complex molecular structures.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "image", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 256, "image_height": 192, "name": "Sbardellati-2019-vcbm-image.png", "type": "image/png", "size": 46683, "path": "Publication:Sbardellati-2019-vcbm", "url": "https://www.cg.tuwien.ac.at/research/publications/2019/Sbardellati-2019-vcbm/Sbardellati-2019-vcbm-image.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2019/Sbardellati-2019-vcbm/Sbardellati-2019-vcbm-image:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1555, "drupal_id": 1363, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/MaximilianSbardellati", "firstname": "Maximilian", 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for Biology and Medicine", "cfp": { "name": "vcbm2019.pdf", "type": "application/pdf", "error": "0", "size": "270183", "orig_name": "vcbm2019.pdf", "ext": "pdf" }, "event": "VCBM 2019", "lecturer": [ { "id": 1555, "drupal_id": 1363, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/MaximilianSbardellati", "firstname": "Maximilian", "lastname": "Sbardellati", "searchname": "Maximilian Sbardellati", "is_teacher": false, "name": "Maximilian Sbardellati", "publications": [ "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sbardellati-2021-eveos" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "Sbardellati-2019-vcbm", "field_id": "lecturer", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1555", "__class": "Author" } ], "pages_from": "103", "pages_to": "112", "research_areas": [ { "id": "BioVis", "drupal_id": 4127, "name": "Biological Data Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", 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null, "website": null, "status": "active", "short_abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "start_date": "2017-06-21", "end_date": "2019-06-20", "leader_id": 1464, "logo": { "name": "logo.png", "path": "project:BioNetIllustration", "type": "image/png", "size": 16337, "orig_name": "logo.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/BioNetIllustration/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "Horizon 2020", "contract_number": "747985", "comment": null } ], "research_areas": [ "BioVis", "InfoVis" ], "publications": [ "cmolik-2020-tvcg", "kouril-2018-LoL", "mizuno-2019-eurovis", "Purchase-2020-gd", "rinortner_susanne-2019-vpicc", "Sbardellati-2019-vcbm", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg", "YOGHOURDJIAN2019" ], "url": "https://www.cg.tuwien.ac.at/research/projects/BioNetIllustration", "__class": "Project" }, { "id": "illvisation", "workgroup_id": "vis", "drupal_id": 4171, "name": "Visual Computing: Illustrative Visualization", "name_de": null, "website": null, "status": "active", "short_abstract": "The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
\r\n", "website": "https://www.cg.tuwien.ac.at/research/area/InfoVis", "teaser": { "name": "teaser.png", "path": "research_area:InfoVis", "type": "image/png", "size": 60875, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/InfoVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "8564188", "arbesser_ba_2023", "Arleo-2019-vis", "Batik-2021", "batik-2021-gd", "bayat-2022-mva", "beham-2014-cupid", "bhore-2021-issac", "birsak-2014-agtb", "birsak-2017-dpe", "borgo-2013-gly", "borondy2022", "Bruckner_Stefan_2015_VAS", "bugnar-esk-2021", "byska-2019-mdfc", "Cai_2018", "casellato-2016-pkg", "Chen-Information-2016", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "daae-lampe-2010-dif", "Deutsch-2018", "Diehl_2015", "Diehl_2021", "dworschak-2016-szcm", "Eckelt_2018_01", "edlinger-2018-vwr", "eiweck-hnv-2021", "eschner-2023-evl", "Escribano_2017", "fourousan2021", "furmanova_2020", "Gadllah_Hani_2016", "Gall2020", "Ganuza_ML_2015_ISA", "georgiev-2019-cbg", "geyer_lukas_2015_prj", "geymayer-2017-std", "Groeller_2011_CW", "Groeller_2011_NR", "Groeller_2014_RWA", "Groeller_2016_P1", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2021-10", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V5_2020", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "gundacker-2020-wlm", "gusenbauer-2018", "gusenbauer-2018-P", "Heim_2021", "heim-gall-2020-dde", "Heinzl2021", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "karnik-09-shapegrammar", "Kehrer-2010-mom", "kehrer-2012-mod", "kehrer-2013-SBC", "Kehrer-2013-STAR", "klaffenboeck-thesis", "Klein_Tobias_2015TIV", "klein-2016-WCL", "koeppel-2021", "Kolter_2021", "Konyha_2013_IVA", "korpitsch-2021-lov", "Kuroko-2020-iV", "Laschober-2018", "li-2019-gdc", "lippeck-2022-mna", "louis-alexandre_dit_petit-frere-2022-veo", "magg2022", "mahler-2021-mdar", "martorell2022", "maruyama-2019-iv", "Matkovic_Kresimir_2015_", "Matkovic-2014-ieee", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "medeiros-2023-gwf", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_Haichao_2015_VQC", "miao2018Dimsum", "mizuno-2019-eurovis", "Muehlbacher_diss_2018", "musleh_maath_2021_mam", "musleh_maath-2021-mam1", "musleh_maath-2021-mam2", "musleh-2022-mam5", "Neubauer2020", "Nowak_2021", "ortner-2016-tunnel", "ortner-2016-visaware", "PH-2011-LDS", "Pilizar_-2020-bachelor", "pirch_2021_VRN", "pointner_simon-2020", "polatsek-2018-stv", "Presch_2020", "Priselac2021", "Purchase-2020-gd", "Purgathofer-2017-China1", "Purgathofer-2017-China2", "Purgathofer-2017-VC-Interface", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_bestphd", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2019_prsps", "Ribicic_2012_VAS", "Rippberger_2019", "sakr_sherif-2020-cacm", "samoul-2019-cnp", "sbardellati-2021-eveos", "schmidt-phd", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sikachev_peter-2011-protovis", "smiech-2018-tei", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger-2013-neuromap", "sorger-2015-litevis", "sorger-2015-taxintec", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "spegel-gruenberger-2020", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "steinschorn-2020-parameter", "stoff-concepMap-2021", "stritzel2022", "Strohmayer-2018-BT", "takahashi-2019-acdt", "Thomas-2018", "TR1862162", "Troidl_2019", "turner-aso", "unger-2019_vcp", "vad_viktor-2017-WVE", "vaico", "Vasileva-2018", "vasileva-2019-smw", "Wagner_032017", "wagner-2024-par", "waldin-2019-ccm", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "webGPU_aggregateVis-2023", "wolf-2023-cc", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-eurovis-star", "wu-2020-tvcg", "ymca", "YOGHOURDJIAN2019" ], "projects": [ "BioNetIllustration", "d9282", "d9522", "deskollage", "Scenario Pool" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=InfoVis", "__class": "ResearchArea" }, { "id": "MedVis", "drupal_id": 4133, "name": "Medical Visualization", "short_abstract": "This research area bridges the gap between visualization and medicine by providing comprehensible visual means to detect diseased regions or to aid clinical treatment decisions.", "abstract": "In collaboration with hospitals we try to investigate various topics in medicine by means of visualization or visual analytics. Due to the increasing amount of data generated by hospital information systems, visualization becomes successively more important. Extracting certain trends from such highly diverse data by suitable visual mappings is one of the primary goals of medical visualization. The data is usually acquired by computed tomography, magnetic resonance imaging or ultrasound.\n\nCurrently, our research addresses the analysis of blood vessels such as the inspection of possible stenotic regions or their spatial arrangement as in the Circle of Willis. Furthermore, we investigate aneurysm classification and lesion detection as well as visualization. Another research area deals with realistic prenatal visualization of the fetus in-vivo and in real-time. Due to the high variability of medical imaging data, we further focus on high-level correction of segmentation defects.", "website": "https://www.cg.tuwien.ac.at/research/area/MedVis", "teaser": { "name": "teaser.png", "path": "research_area:MedVis", "type": "image/png", "size": 225330, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/MedVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "amabili2021", "amirkhanov-2018-withteeth", "amirkhanov-2021-diss", "antes-2023-vhv", "arbesser_ba_2023", "Auzinger_Mistelbauer_2013_CSR", "balabanian-2008-hvv", "Balabanian-2010-IIV", "Bauer_David_2018", "bayat-2022-mva", "Bernold_2019", "bernold-2019-epr", "Birkeland-2012-IMC", "borondy2022", "bront-2023-svo", "bruckner-2010-HVC", "burns-2007-fea", "Chen-Information-2016", "djuric-2020-wvo", "Eckelt_2017", "Eichner2022", "EuroVis2018-ShortPapers-Karall", "fmistelbauer-2014-adict", "Ford-2012-HRV", "furmanova_2020", "Gadllah_Hani_2016", "Gall_2017", "gall_alexander_2016BA", "ganglberger2019", "Gietl_2020", "Gillmann2021", "Groeller_2016_P4", "Groeller_V42020", "grossmann_2019_pelvisrunner_poster", "Grossmann_MA", "gutekunst_2019", "Hainoun2019", "Heim-2017", "Ismail-2018", "jank-2022-cbf", "Karall2017CVAB", "Karall2018_2", "karimov-2013-vivisection", "karimov-2015-HD", "karimov-2016-GIVE", "karimov-2016-SD", "Kovacs_PhD", "Machegger2018DTI", "magg-2021-dva", "magg2021", "magg2022", "malan_fluoro", "martorell2022", "Masopust_2018", "Mazza_2020", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_Haichao_2015_VQC", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2017", "mindek-2017-dsn", "Mistelbauer_2021", "Mistelbauer_Gabriel_2016", "mistelbauer-2012-cr", "mistelbauer-2012-ssv", "mistelbauer-2013-cfa", "moerth_eric-2016-3DF", "moerth-2018-tpose", "Musleh_PhD", "musleh-2023-ugi", "Oancea_2018_1", "Oancea_Stefan_2016_VOT", "Oancea2018OAK", "Pahr_PhD", "pahr-2021-vologram", "PERNDORFER-2015-ECS", "Pezenka-2016-MT", "Philipp_Hochhauser_2023", "raidou_2018_bladderrunner", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_bestphd", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_previs2021", "raidou_RO2019", "raidou_shonan167", "raidou_slicedice", "raidou_star2019", "raidou_vcbm14", "raidou_vis14", "raidou_visgap2020", "raidou2018visualflatter", "Reiter2017CVAP", "rraidou_clinical", "rraidou_EG17", "rraidou_phdbook", "ruiz-2008-OVR", "ruiz-2008-SEV", "schindler_2020vis", "Schindler-2022-eurovis", "schindler2020", "Schmidlehner_Sandra_SbC", "Schrempf_2018", "SifuentesGangl2017FIS", "solteszova-2010-MOS", "Solteszova2016", "Spelitz2020", "stritzel2022", "Stritzel2022_thesis", "Tramberger_2018", "Tramberger2017BCS", "unger_2017", "Viola_Ivan_2013_D3D", "Viola_Ivan_2013_HQ3", "Viola_Ivan_DAC", "Viola_Ivan_UVP", "Viola_Ivan_VDP", "vitruvian_2019", "vogel2022", "Weissenboeck_2019_PhD" ], "projects": [ "Smile Analytics" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=MedVis", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [ { "href": "https://www.springer.com/gp/book/9783030142261", "caption": "link", "description": null, "main_file": 0 } ], "files": [], "projects_workgroups": [ { "id": "vis", "drupal_id": 1354, "name": "Visualization Group", "website": "https://www.cg.tuwien.ac.at/group/Visualization-Group", "projects": [ "ADAPT", "AngioVis", "Animated Cell Tab development", "AutARG", "avr", "BioNetIllustration", "COMRADE", "d4328", "d4335", "d4534", "d9275", "d9282", "d9522", "d9555", "deskollage", "diagvis", "exvisation", "Illustrare", "illvisation", "KASI", "ManyViews", "NeuroViewer", "ProcessIllVis", "ProKeyAnim", "PVG", "Scale-VS", "Scenario Pool", "Semantic Steering", "Sim-CT", "Smart-CT", "Smile Analytics", "ViMaL", "VISAR" ], "research_areas": [ "BioVis", "IllVis", "InfoVis", "MedVis", "NetVis", "Perception", "VisMat", "VR" ], "publications": [ "2013_Viola_Ivan_2013_MTS", "2015-image-coll", "2017-kouril-illcell", "2019-ic", "AA2020", "alacruzECR2004", "alacruzVisSym2004", "Alharbi_2021", "Alsallakh_2012_RCW", "alsallakh-2009-iva", "altendorfer-2008-vts", "amabili2021", "amirkhanov_2012", "amirkhanov_2012heur", "amirkhanov-2011", "amirkhanov-2014-ama", "amirkhanov-2018-withteeth", "amirkhanov-2021-diss", "amirkhanov2010AMA", "ammer-2008-lst", "An-2018-CHI", "AndreUrsits_2013_APP", "antes-2023-vhv", "Antonini2020", "arbesser_ba_2023", "Artner-2004-Hig", "Artner-2005-Hig", "Artner-2005-Thesis", "audioflow", "Auzinger_Mistelbauer_2013_CSR", "balabanian-2007-ant", "balabanian-2008-hvv", "Balabanian-2010-IIV", "Balabanian-2010-PSDSV", "Balduz_01", "Basch_2011_ATA", "Bauer_David_2018", "Bauer_Johannes_2014_IWB", "bauer-2015-cbfd", "Bayat_2019", "bayer-2015-gapaot", "bbeer-2013", "Bechtold2020", "Beer_2011_DVE", "Beham_Michael_PSC", "beham-2014-cupid", "bernhard-2006-dvrcta", "bernhard-2014-GTOM", "bernhard-2016-gft", "Bernold_2019", "bernold-2019-epr", "bhore-2021-issac", "birkeland_aasmund_2014_pums", "Birkeland-2012-IMC", "BirsakHanzl-2009", "boeroendy-2022-uio", "boesch_2014_browserHistoryVis", "borgo-2013-gly", "borondy2022", "bouzari-thesis", "Brandorff-08-OV", "brandorff-2009-erv", "brandstaetter_01", "brandstaetter-2007-vosd", "Brandstaetter2020", "breitenecker-2020-bct", "bront-2023-svo", "brucker-2010-RES", "Bruckner_Stefan_2015_VAS", "bruckner-2004-EVV", "bruckner-2005-AIV", "bruckner-2005-ATI", "bruckner-2005-ICV", "bruckner-2005-vid", "bruckner-2005-VIS", "bruckner-2006-EVV", "bruckner-2006-ICE", "bruckner-2007-EDF", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2008-IVV", "bruckner-2009-BVQ", "bruckner-2009-IVV", "bruckner-2010-HVC", "bruckner-2010-IFC", "bruckner-2010-ISM", "bruckner-2010-SES", "Bruckner-2012-VEA", "buerger_raphael_2006_3dpoly", "Buerger-2007-cmv", "Buerger-2007-eurovis", "buerger-2007-star", "bugnar-esk-2021", "burns-2007-fea", "bydlinski-2015-gapaot", "byska-2019-mdfc", "Cai_2018", "Caic2021", "Carata_2011_IVE", "carbesser-2013", "casellato-2016-pkg", "cellVIEW_2015", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "Cornel_Daniel_2015_VOC", "Cornel2016CFM", "coto-2005-MAC", "Cruz-thesis", "Csebfalvi-2002-FPVF", "Csebfalvi-2002-SBICG", "Csebfalvi-2002-Smo", "Csebfalvi-2012-IOM", "Csuk_2011", "daae-lampe-2010-dif", "dataset-christmastree", "dataset-present", "dataset-stagbeetle", "Deutsch-2018", "Dhanoa_2021", "Diehl_2015", "Diehl_2021", "Diehl-2017-Albero", "Dietrich_1", "dietrich-2016-viseq2", "diss-thesis-bratislava", "diss-thesis-magdeburg", "diss-thesis-siegen", "djuric-2020-wvo", "donabauer_2019_1", "donabauer-2015-asc", "draeger-2005-chain", "dworschak-2016-szcm", "dworschak-2016-szcm", "Eckelt_2017", "Eckelt_2018_01", "Edi_2019_10_01", "edlinger-2018-vwr", "eg-tut2005-iv", "Ehlers_PhD", "ehlers-2023-iro", "ehlers-thesis", "Eichner2022", "eiweck-hnv-2021", "emsenhuber-2008-vhd", "eschner-2023-evl", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Essler2022", "EuroVis2018-ShortPapers-Karall", "EuroVis2018-ShortPapers-Reiter", "facial2004", "Fechter_2011_DBS", "filipovic-2014-dect", "FISCHL-2012-CTASEG", "fmistelbauer-2014-ad", "fmistelbauer-2014-adict", "Ford-2012-HRV", "fourousan2021", "freiler-2008-ste", "fritz-2009-ieq", "Froehler_Berhnard_2015_ESM", "froschauer-2009-iod", "Fruehstueck_Anna_2015_DOM", "fuchs_raphael_2007_par", "fuchs_vhml", "fuchs-2008-del", "fuchs-vortex", "furmanova_2020", "gadllah_2016", "Gadllah_Hani_2016", "gall_2016", "Gall_2017", "gall_alexander_2016BA", "Gall2020", "Gall2021", "gangl-2018-gpsart", "Ganglberger-2022-cg", "ganglberger2019", "Ganuza", "Ganuza_2015", "Ganuza_MJ_2015_AVe", "Ganuza_ML_2015_ISA", "Ganuza-2017-IVCSGM", "Gavrilescu_2011_VGP", "gavrilescu-2008-vsc", "gavrilescu-2009-postrend", "Gavrilescu-2010-CIE", "Gehrer_Daniel_CUI", "Gehrer-2017", "Gehrer-2017-molmach", "georgiev-2019-cbg", "gerl-2006-vhi", "geymayer-2017-std", "Gietl_2020", "Gillmann2021", "glanznig-2009-LAMC", "glinzner-2016-tex", "Gogel2020", "gostler-2015-3dp", "grammatikaki-thesis", "grimm-2004-arefined", "GRIMM-2004-FDMX-P", "grimm-2004-memory", "GRIMM-2004-PPC", "grimm-2004-volume", "Groeller_2011_CVC", "Groeller_2011_CW", "Groeller_2011_GBC", "Groeller_2011_HP", "Groeller_2011_HSU", "Groeller_2011_IPV", "Groeller_2011_IVP", "Groeller_2011_NR", "Groeller_2011_NSM", "Groeller_2011_VCD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSS", "Groeller_2012_KAV", "Groeller_2012_VBP", "Groeller_2012_ViV", "Groeller_2012_VV", "Groeller_2014_CaQ", "Groeller_2014_CQV", "Groeller_2014_CV", "Groeller_2014_RWA", "Groeller_2014_STC", "Groeller_2014_UPS", "Groeller_2014_VND", "Groeller_2016_I2", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2016_P7", "Groeller_2021_11", "Groeller_2021_BVM", "Groeller_2021-10", "Groeller_Edi_2013_TVC", "Groeller_Edi_2013_VCQ", "Groeller_Edi_2013TVCK", "Groeller_Edi_VKA", "Groeller_Eduard_2014_THS", "Groeller_Eduard_2014_TSP", "Groeller_Eduard_2014_UCT", "Groeller_Eduard_2015_SMV", "Groeller_Eduard_2015_TCU", "Groeller_V1_2020", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V42020", "Groeller_V5_2020", "groeller-2004-efficient", "groeller-2004-imp", "groeller-2004-sci", "groeller-2005-dia", "Groeller-2010-CVC", "Groeller-2010-IFI", "Groeller-2010-IVVI", "Groeller-2011-HSH", "Groeller-2017-ARTORW", "Groeller-2017-AVC", "Groeller-2017-IVAMCS", "Groeller-2017-PTPMD", "Groller_2021-12-03", "Gronde_2008", "Grorller-2010-IVV", "grossmann_2019_pelvisrunner_poster", "Grossmann_MA", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "grossmann-thesis", "Gruenauer-2011-CAT", "Gschwantner_2011_AMQ", "gundacker-2020-wlm", "Gurbat_2011_SBS", "gusenbauer-2018", "gusenbauer-2018", "gusenbauer-2018-P", "gutekunst_2019", "Hadwiger-2002-Fas", "haidacher_2010_statTF", "haidacher-2004-FVV", "haidacher-2005-MND", "haidacher-2007-idr", "haidacher-2008-vcbm", "haidacher-2011-MSM", "haidacher-2011-phd", "haidacher-2011-VAM", "Hainoun2019", "Halladjian_2020", "hanzl-2011", "hartl-2008-vcd", "hartmann-2005-adv", "haushofer-2018-skinning", "Heim_2020", "Heim_2021", "Heim-2017", "heim-gall-2020-dde", "heinzl_2006_RSDVCDM", "heinzl-2006-rep", "heinzl-2008-sam", "Heinzl2021", "Herghelegiu-2012-BPV", "herzberger-2023-swv", "herzberger-2024-roh", "Hirsch_Christian_2015_ABL", "Hladuvka-2002-Exp", "hladuvka-2002-exploiting", "Hochmayr_Manuel_2015_PSE", "hochmayr_manuel-2011-VoRMD", "Hochpoechler_2016_VR", "horvath-2018-ism", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "irger-2023-ves", "Ismail-2018", "jank-2022-cbf", "Kanitsar-2002-CPR", "Kanitsar-2003-Adva", "Kanitsar-2003-Dem", "Kanitsar-2004-Dia", "Kanitsar-thesis", "kapferer-2017-godot", "Karall2017CVAB", "Karall2018_2", "karimov-2013-vivisection", "karimov-2015-HD", "karimov-2016-GIVE", "karimov-2016-SD", "keglevic_schulz-2011-MB", "Kehrer-2008-hyp", "Kehrer-2010-mom", "kehrer-2011-vai", "kehrer-2012-mod", "kehrer-2013-IVA", "kehrer-2013-SBC", "Kehrer-2013-STAR", "Kehrer-2014-CSD", "kimmersdorfer-fancyMaps-2023", "Kinkelin_2009", "Kinkelin-2011-VR", "Kleber-2004-TFE", "klein_2017_IM", "klein_2019_MSA_Poster", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Klein_Tobias_2015TIV", "klein-thesis", "Knapp_2017_CVR", "knapp_michael_2004_MAS", "knapp-2004-semi", "koch_bernhard_2018-1", "koch-2018-sso", "koehle-2013-sgv", "koeppel-2021", "Koeppel2020", "Kohlmann-2007-EBV", "kohlmann-2007-livesync", "kohlmann-2008-lse", "kohlmann-2009-cp", "kohlmann-2009-lssl", "kolesar-ivan-2014-polymers", "Kolter_2021", "Konyha_2013_IVA", "korpitsch_thorsten-2019", "korpitsch-2020-cescg", "Korpitsch-2020-wscg", "korpitsch-2021-lov", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2018-LoL", "kouril-2018-LoL", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kovacs_PhD", "krakhofer-2015", "Krone2016VABC", "kuehschelm-2005-adv", "Kugler_2019", "Kuroko-2020-iV", "Labschuetz_Matthias_2015_JIT", "Labschuetz_Matthias_2016_AHD", "Labschuetz_Matthias_2016_JIT", "Labschuetz_Matthias_2016_JITT", "Lackner_2022", "LaCruz2004", "Ladstaedter-2009-sim", "Langer_Edith_IR1", "Langer_Maximillian_DMV", "Laschober-2018", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lemuzic-mindek-sorger-cgfcc", "Leutschacher_2022", "li-2019-gdc", "lie-2009-cri", "lipp-2017-mgpu", "lipp-2017-vulkan", "lippeck-2022-mna", "liu-2014-ac", "lkoell-2014", "ludwig-2012-MT", "Machegger2018DTI", "magg-2021-dva", "magg2021", "mahler-2021-mdar", "major-2010-mrf", "malan_fluoro", "malik-2007-FP", "malik-2009-CVFA", "malik-thesis", "Manczarski-2016", "Marek06", "Maricic_2013_VFE", "martorell2022", "maruyama-2019-iv", "Masopust_2018", "Masterthesis-Viola", "Matkovic_Kresimir_2015_", "matt-2023-vae", "matt-masterthesis", "Mattausch-2003-ISL", "Mattausch-2003-SIE", "Mattausch-2003-Str", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "Mazza_2020", "Mazza_2021_05", "Melo_2018_11", "Meusburger_2020", "Miao_2015_VCBM", "Miao_2019", "Miao_Haichao_2015_VQC", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_plitvice_2018", "miao_thesis_2019", "miao_tvcg_2017", "miao_tvcg_2018", "miao_tvcg_2018", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Michl_2017_CSV", "mindek_peter-2012-visgroupproj", "mindek_peter-2014-cs_kaust", "mindek-2013-cs_cvut", "mindek-2013-csl", "mindek-2013-pel", "mindek-2014-mcs", "mindek-2014-vivi_cvut", "mindek-2015-mc", "mindek-2015-mctalk", "mindek-2016-utah-talk", "mindek-2017-dsn", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-thesis", "mistelbauer_2013_SIV", "Mistelbauer_2021", "Mistelbauer_Gabriel_2015_NHR", "Mistelbauer_Gabriel_2016", "mistelbauer-2010-pvv", "mistelbauer-2012-cr", "mistelbauer-2012-ssv", "mistelbauer-2013-cfa", "mistelbauer-2015-abvv", "Mitterhofer_2017", "mizuno-2019-eurovis", "Mlejnek_2004_PF", "Mlejnek_2005_AOEPF", "Mlejnek_2006_MVOA", "Mlejnek-2004-Int", "Mlejnek-2004-ITVAC", "Mlinaric-2015-MT", "Moellinger_Christian_IDE2", "moerth_eric-2016-3DF", "moerth-2018-tpose", "monitzer_2008_FluSi", "Morar_2012_ISB", "Muehlbacher_diss_2018", "mueller-2009-ivs", "Muigg_2011_ISI", "Muigg_2011_VC", "Muigg-2008-four", "muigg-2012-svr", "Musleh_PhD", "Neumann-2002-Fea", "nguyen_2020-covid", "Niedermayer_2018", "Novotny_2013_ASVD", "Nowak_2020", "Nowak_2021", "Oancea_2018_1", "Oancea_Stefan_2016_VOT", "Oancea2018OAK", "oeltze-2013-tut", "opitz-2009-cvv", "Ortner_PhD", "Ortner2020", "Pahr_PhD", "pahr-2021-vologram", "pahr-thesis", "Pahr2020", "Pajer_2012_VoM", "Panayotov", "Parzer_2013_IIG", "patel_2009_MC", "patel_daniel_2007_IRSD", "patel-2008-tsa", "patel-2009-evr", "patel-2011-PEA", "Pauschenwein_2022", "Peter_2012_AIV", "Pezenka-2016-MT", "Pfahler_David_2015_IPI", "Pfahler-2016-MT", "PH-2011-LDS", "phd-viola", "Philipp_Hochhauser_2023", "Pilizar_-2020-bachelor", "piringer-2009-hds", "Plank_Pascal_2015_HVP", "plank-2017-sldg", "PMI_AR_2012", "pointner_simon-2020", "polatsek-2018-stv", "polatsek-2018-stv", "Pramerdorfer-2011-PAV", "preim-2009-sve", "Presch_2020", "Priselac2021", "puehringer-2009-sbm", "puenguentzky-2014-ht", "Purchase-2020-gd", "raidou_2018_bladderrunner", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_2020Onc", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_RO2019", "raidou_shonan167", "raidou_slicedice", "raidou_star2019", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2018_rv3", "raidou2018visualflatter", "raidou2019_prsps", "rasch-2016-imgses", "Rau08", "Rautek_Peter_2014_TUC", "Rautek_Peter_2014_VSA", "rautek-2005-dvr", "Rautek-2007-O3D", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-kav", "Rautek-2008-VF", "rautek-2009-vmv", "RAUTEK06", "Rautek06Vis", "Rautek06VMLS", "rautek2010", "Red_Andreas_2015_FFT", "Reh_Andreas_VoP", "reh-2013", "reina-2020-mtv", "Reisacher_Matthias_CPW", "Reisacher2016", "Reiter_2009_IXIA", "Reiter2017CVAP", "Rezk06Vis", "Ribicic_2012_SUS", "Ribicic_2012_VAS", "Ribicic-2010-CRS", "Riegelnegg_2019", "rinortner_susanne-2019-vpicc", "rinortner_susanne-2019-vpicc", "Rippberger_2019", "rippl-2023-atg", "ritzberger-2010-nar", "Ropinski-2012-UBT", "rraidou_clinical", "rraidou_EG17", "rraidou_phdbook", "rsabin-2013", "ruiz-2008-OVR", "ruiz-2008-SEV", "samoul-2019-cnp", "Sanjin_Rados_RV", "Sarkis_2021", "Sbardellati-2019-vcbm", "Sbardellati-2019-vcbm", "sbardellati-2021-eveos", "scharsach-2005-adv", "Schernthaner-2017-MCP", "schindler_2020vis", "Schindler-2022-eurovis", "schindler2020", "schleicher-2011-VLSC", "Schmidlehner_Sandra_SbC", "schmidlehner2021", "schmidt-2011-mt", "schmidt-phd", "schmidt-phd", "schoellhuber-2008-asc", "scholz_2021", "Schrempf_2018", "Schrempf_2020", "SCHUETZ-2023-SIMLOD", "schuh-2018-mesh-blending", "Schulze_Florian_2013_CMI", "schwankl-2013-smis", "seyfert-2017", "shakhova-2023-atp", "sietzen-2019-wnn", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sifuentes-2018-crowd", "SifuentesGangl2017FIS", "sikachev_peter_2010_STLCI", "sikachev_peter-2011-dfc", "sikachev_peter-2011-incshad", "sikachev_peter-2011-metavis", "sikachev_peter-2011-protovis", "sikachev-2010-DFC", "sikachev-2010-ill_vis_vol_ren", "Sippl_Sebastian_EFG", "smiech-2018-tei", "Smisek_Michal_A3D", "Sollboeck_2011_FSS", "sollboeck-2011", "Solteszova-2009-VQN", "solteszova-2010-MOS", "Solteszova2016", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "Soros_AVN_2011", "Soros-AV-2010", "Spechtenhauser_Florian_2016", "spegel-gruenberger-2020", "Spelitz2020", "spoerk-2010-hpgpu", "Stabel_2012_UDM", "stappen_2017_animatedcomic", "Staudacher_2022", "staudacher_florian-2016-topo3d", "stehno-2011-RVD", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "StickmanMax-shoetta-kampfer", "stoff-concepMap-2021", "StrakaVis2004", "stritzel2022", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "suntinger-2008-etet", "suntinger-2008-tet", "Swoboda_Nicolas_VIT", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "termeer-2006-000", "termeer-2007-covicad", "termeer-2008-scmr", "termeer-2008-vis", "termeer-2009-cvc", "termeer-2009-scmr", "textures-3d-printing", "thesis-tekaya", "Thomas-2018", "Thurner-2005-IVR", "toth-2007-ndd", "TR-186-2-05-01", "TR-186-2-05-02", "TR-186-2-05-03", "TR-186-2-05-04", "TR-186-2-05-06", "TR-186-2-05-07", "TR-186-2-05-08", "TR-186-2-06-01", "TR-186-2-06-02", "TR-186-2-06-03", "TR-186-2-06-04", "TR-186-2-07-02", "TR-186-2-07-03", "TR-186-2-07-04", "TR-186-2-07-05", "TR-186-2-07-06", "TR-186-2-07-07", "TR-186-2-07-08", "TR-186-2-07-10", "TR-186-2-07-11", "TR-186-2-07-12", "TR-186-2-08-01", "TR-186-2-08-02", "TR-186-2-08-03", "TR-186-2-08-04", "TR-186-2-08-05", "TR-186-2-08-06", "TR-186-2-08-07", "TR-186-2-08-08", "TR-186-2-08-10", "TR-186-2-08-11", "TR-186-2-08-12", "TR-186-2-08-14", "TR-186-2-09-01", "TR-186-2-15-03", "TR1862162", "Tramberger_2018", "Tramberger2017BCS", "Trautner_Thomas_2014_VAE", "trautner-2018-imd", "trautner-2018-imd", "travnicek-2017-thm", "Trenkwalder-2004-MAR", "Troidl_2019", "Troidl_2021", "Troidl_2022", "turner-aso", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "tweebo-2014", "ulschmid-2024-reo", "unger_2017", "unger-2019_vcp", "Unger2020", "vad_2015_phd", "Vad_Viktor_2015_RVV", "vad-2016-bre", "vaico", "varchola_andrej-2012-fetoscopic", "Vasileva_2022", "Vasileva-2018", "vessel2003", "Viola_2013_IDV", "Viola_Ivan_2013_CAI", "Viola_Ivan_2013_D3D", "Viola_Ivan_2013_DC", "Viola_Ivan_2013_GS", "Viola_Ivan_2013_HQ3", "Viola_Ivan_2013_RMA", "Viola_Ivan_2013_RSb", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_DAC", "Viola_Ivan_IIP", "Viola_Ivan_UVP", "Viola_Ivan_VDP", "Viola-05-Smart", "Viola-2003-GPU", "Viola-2003-Har", "viola-2003-hbn", "Viola-2003-NON", "viola-2004-gbf", "Viola-2004-GPU", "viola-2004-har", "viola-2004-har2", "viola-2004-idv", "viola-2004-imp", "Viola-2004-ImpX", "Viola-2004-ImpX2", "viola-2005-imp", "viola-2006-FoA", "viola-evr", "Viola-Pondering-2017", "viola-popular-article-2006", "Viola-vistutillustrativevis", "vis-foa", "VisWeek-Tutorial-2012-Uncertainty", "vitruvian_2019", "voglreiter-2023-tro", "Vucenovic_2022", "vucini_2006", "vucini_2008_rnp", "vucini_2009", "vucini_erald-2007-FRI", "vucini-2009-phd", "vucini-2011", "Wagner_032017", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2017_FlickerObserver", "Waldin_Nicholas_2017_FlickerObserver", "Waldin_Nicholas_2017_FlickerObserver", "waldin-2017-thesis", "waldin-2019-ccm", "waldin-2019-ccm", "Waldner_2017_11", "Waldner_2017_11", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-af", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2018-ved", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "Waser-2010-WL", "webGPU_aggregateVis-2023", "weiner_2011", "Weissenboeck_2019", "Weissenboeck_2019_PhD", "weissenboeck-2014", "Wihann_2017", "wolf-2023-cc", "Woschizka_2021", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg", "wu-2021", "wu-2021-vi", "xmastree2002", "xmastree2005", "ymca", "YOGHOURDJIAN2019", "Zambal-2003-SWA", "zambal-2005-3dact", "Zaufel_2021", "zauner-2013-svkinect", "zechmeister2020", "Zeng_2021", "Zhu-2014-flowvis" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Workgroup&id=vis", "__class": "Workgroup" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2019/raidou_2019_springer/", "__class": "Publication" }, { "id": "byska-2019-mdfc", "type_id": "journalpaper", "tu_id": 283263, "repositum_id": null, "title": "Analysis of Long Molecular Dynamics Simulations Using Interactive Focus+Context Visualization", "date": "2019-06", "abstract": "Analyzing molecular dynamics (MD) simulations is a key aspect to understand protein dynamics and function. With increasing computational power, it is now possible to generate very long and complex simulations, which are cumbersome to explore using traditional 3D animations of protein movements. Guided by requirements derived from multiple focus groups with protein engineering experts, we designed and developed a novel interactive visual analysis approach for long and crowded MD simulations. In this approach, we link a dynamic 3D focus+context visualization with a 2D chart of time series data to guide the detection and navigation towards important spatio-temporal events. The 3D visualization renders elements of interest in more detail and increases the temporal resolution dependent on the time series data or the spatial region of interest. In case studies with different MD simulation data sets and research questions, we found that the proposed visual analysis approach facilitates exploratory analysis to generate, confirm, or reject hypotheses about causalities. 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Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "InfoVis", "drupal_id": 4128, "name": "Information Visualization and Visual Analytics", "short_abstract": "In this research area, our focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning. ", "abstract": "Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
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"Wihann_2017", "field_id": "supervisor", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=171", "__class": "Author" }, { "id": 1473, "drupal_id": null, "orcid_id": null, "website": null, "firstname": "Ivan", "lastname": "Barisic", "searchname": "Ivan Barisic", "is_teacher": false, "name": "Ivan Barisic", "publications": [ "miao_nantech_2019", "miao_nar_2020", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Sbardellati-2019-vcbm" ], "publications_first": [], "project_leader": [], "publication_field": [], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1473", "__class": "Author" } ], "date_from": "2019-05-27", "date_to": "2019-05-29", "event": "NANTECH 2019 – Nucleic Acid Nanotechnology: From Algorithmic Design to Biochemical Applications – Espoo, Finland", "research_areas": [ { "id": "BioVis", "drupal_id": 4127, "name": "Biological Data Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" }, { "id": "Modeling", "drupal_id": 4130, "name": "Modeling", "short_abstract": "In this area, we focus on researching methods and algorithms that facilitate creation, representation, analysis and processing of 3D models.", "abstract": "One of the major bottlenecks in the field of computer graphics is the one of content creation, particularly the creation of high-quality 3D geometric models. These models are a demand in many industries, such as entertainment, computer-aided design, urban planning, the fabrication of physical objects, as well as research areas like medical or scientific visualizations and simulations.\n\nWhile rendering - the classical field of computer graphics - has reached very high standards in the recent two decades, the issue of the creation of appropriate digital models is a difficult problem that hardly keeps pace with current demands. Indeed, it is a complex creative process that involves both artistic and technical skills.\n\nTo make this process easier, our goal in this research area is to find new methods and algorithms that facilitate creation, representation, analysis and processing of 3D models.", "website": "https://www.cg.tuwien.ac.at/research/area/Modeling", "teaser": { "name": "teaser.jpg", "path": "research_area:Modeling", "type": "image/jpeg", "size": 190581, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/Modeling/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "rend" ], "publications": [ "AA2020", "Adorjan-2015", "aichner-2016-sadf", "arikan-2013-osn", "birsak-thesis", "Birsak2018-SA", "Brandstaetter2020", "brunner_lukas_2022_ssb", "Caic2021", "clemenz_2019_rosy_fields", "DOG10", "dusberger-2010-msm", "eibens-2021-tsgpmg", "eibensteiner-2021-pmcg", "eibner-2009-gpc", "erler_2024_ppsurf", "erler_philipp-2016-femfluid-prakt", "erler-2020-p2s", "fan-2014-scfl", "ferschin-1992-kons", "fiedler-2009-php", "fleiss-2015-da", "GAHR-2013-AGM", "gamsjaeger-2022-proc", "gersthofer-2016-sosob", "gervautz-1989-sol1", "gervautz-1993-use", "griessmair-1989-def1", "groeller-1992-frac", "groeller-1995-mod", "Groeller-1995-SDC", "Grossfurtner-2023-paego", "Guerrero-2014-GRF", "Guerrero-2014-TPS", "guerrero-2015-lsp", "HECHER-2017-HDY", "hiess-1992-comb", "hofer_kerstin-2023-sketch2model", "honic-2020-w78", "HU-2017-ETM", "HUMMEL-2001-MSE", "Ilcik_2015_LAY", "ilcik-2010-ps", "ilcik-2013-cipmi", "ilcik-2014-cgbpmi", "ilcik-2016-cmssg", "ilcik-2021-xmas", "kapferer_2021_advancing", "karnik-09-shapegrammar", "Kellner-2021-DA", "kendlbacher-2016", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kreuzer-2016-isf", "kuehtreiber-2010-ikph", "leimer_2017_rbpesc", "leimer_2020-cag", "leimer-2016-coan", "leimer-2016-rpe", "leimer-2018-sar", "leimer-2023-ecd", "LEOPOLD-2017-ALG", "LIPP-2007-CGA", "LIPP-2008-IEV", "LIPP-2009-PGL", "LIPP-2009-PGL2", "lipp2011a", "Maierhofer-thesis", "manpreet_kainth-2012-rus", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_thesis_2019", "mindek-xmas-card-2016", "mujadzic-2023-hfp", "musialski-2009-sbfr", "musialski-2010-pfi", "musialski-2010-tof", "musialski-2012-icb", "musialski-2012-sur", "Musialski-2013-ipmum", "musialski-2013-surcgf", "NIEDERREITER-2010-SIM", "Pahr2020", "Parzer_2013_IIG", "pegrisch_2018_uvs", "pogrzebacz-2014-gggm", "preiner_2017_phd", "PUEYO-2019-SCL", "RADAX-2010-LOD", "Radwan_2021_Occ", "rasch-2016-imgses", "recheis-2009-arr", "Reichinger-12", "reisinger-2023-iad", "reisner-2010-ind", "reisner-2011-akgeo", "reitsamer-2008-tsud", "Rumpelnik_Martin-2020-NPR", "scharl-master-thesis", "scholz_2017_bac", "SCHWAERZLER-2017-SBGM", "SIETZEN-2017-BBO", "sifuentes-2018-crowd", "sippl-2014-fss", "sperl-2013-BA", "spitaler-2015-pbi", "steiner_2016_isad", "steiner-2014-da", "steinkellner-2022-dll", "steinschorn-2020-parameter", "steinschorn-2023-p2m", "tobler02_amrmg", "tobler02_mbpls", "Traxler-1996-GAI", "VASILJEVS-2018-PMPL", "Viola_Ivan_2013_RMA", "Viola_Ivan_2013_RSb", "weiner_2011", "WIMMER-2015-CGFC", "WIMMER-2016-FUTURIS", "WIMMER-2020-ASG", "wimmer-2023-acd", "Winkler-2017", "WINKLER-2019-PDG", "Wonka-2003-Ins", "zeiller-1993-coll", "Zotti-2003-AMP", "zotti-2003-ash", "zotti-2006-pla", "zotti-2007-eg" ], "projects": [ "3DSpatialization", "d4388", "EVOCATION", "GAMEWORLD", "Harvest4D", "PAMINA", "Photo-Guide", "REPLICATE", "SCI_BIM", "Wohnen 4.0" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=Modeling", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [], "files": [ { "description": null, "filetitle": "", "main_file": false, "use_in_gallery": false, "access": "public", "preview_image_width": 647, "preview_image_height": 918, "name": "miao_nantech_2019-.pdf", "type": "application/pdf", "size": 2548866, "path": "Publication:miao_nantech_2019", "preview_name": "miao_nantech_2019-:preview.png", "preview_type": "image/png", "preview_size": 470720, "url": "https://www.cg.tuwien.ac.at/research/publications/2019/miao_nantech_2019/miao_nantech_2019-.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2019/miao_nantech_2019/miao_nantech_2019-:thumb{{size}}.png" } ], "projects_workgroups": [ { "id": "Illustrare", "workgroup_id": "vis", "drupal_id": 4189, "name": "ILLUSTRARE: Integrative Visual Abstraction of Molecular Data", "name_de": null, "website": null, "status": "active", "short_abstract": "FWF - I 2953-N31\nIntegrative Visual Abstraction of Molecular Data", "abstract": "In many aspects of our modern lives we face the problem of having to make sense of large amounts of data. This applies to scientists trying to make sense of their experiments and simulations, to bankers and traders trying to understand the dynamics of the financial markets, and to large enterprises which need to understand the principles behind demand and supply—to name just a few examples. The basic problem in all these cases is that people need to identify important and/or unexpected features in large simulated or captured datasets. Visualization is the domain that facilitates this process of sense-making by dramatically simplifying the process of obtaining an understanding of the data—by representing data visually and thus amplifying people’s cognition. This inherent capability of (good) visualization techniques to amplify human cognition, however, is no longer enough to be able to make sense of today’s huge datasets. To be able to see the essential aspects we need dedicated mechanisms that abstract away the (unnecessary) detail to, in turn, allow the user of the visualization to focus on the important elements. The crucial problem in this context is that it is impossible to know what is important and what is not in a general way—importance changes based on the research question, on the application domain, on the data size, on the user, on the specific situation, etc. Visualization technology therefore needs to support dynamic change of visual abstraction of the data to reflect these contextual changes. The fundamental research challenge in visualization for us is to get an understanding of what (visual) abstraction really is, what it means, how it can be controlled, and how it is, can be, and should be used in visualization.\n", "start_date": "2017-01-01", "end_date": "2019-12-31", "leader_id": 171, "logo": { "name": "logo.jpg", "path": "project:Illustrare", "type": "image/jpeg", "size": 95116, "orig_name": "logo.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "fwf", "contract_number": "I 2953-N31", "comment": null } ], "research_areas": [ "BioVis", "IllVis" ], "publications": [ "Halladjian_2020", "kouril-2018-LoL", "lawonn-2018-illvisstar", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Viola-Pondering-2017" ], "url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare", "__class": "Project" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2019/miao_nantech_2019/", "__class": "Publication" }, { "id": "wu-2019-bmc", "type_id": "journalpaper_notalk", "tu_id": 280645, "repositum_id": null, "title": "Metabopolis: Scalable Network Layout for Biological Pathway Diagrams in Urban Map Style", "date": "2019-05-15", "abstract": "Background\nBiological pathways represent chains of molecular interactions in biological systems that jointly form complex dynamic networks. The network structure changes from the significance of biological experiments and layout algorithms often sacrifice low-level details to maintain high-level information, which complicates the entire image to large biochemical systems such as human metabolic pathways.\n\nResults\nOur work is inspired by concepts from urban planning since we create a visual hierarchy of biological pathways, which is analogous to city blocks and grid-like road networks in an urban area. We automatize the manual drawing process of biologists by first partitioning the map domain into multiple sub-blocks, and then building the corresponding pathways by routing edges schematically, to maintain the global and local context simultaneously. Our system incorporates constrained floor-planning and network-flow algorithms to optimize the layout of sub-blocks and to distribute the edge density along the map domain. We have developed the approach in close collaboration with domain experts and present their feedback on the pathway diagrams based on selected use cases.\n\nConclusions\nWe present a new approach for computing biological pathway maps that untangles visual clutter by decomposing large networks into semantic sub-networks and bundling long edges to create space for presenting relationships systematically.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "image", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 256, "image_height": 192, "name": "wu-2019-bmc-image.png", "type": "image/png", "size": 107492, "path": "Publication:wu-2019-bmc", "url": "https://www.cg.tuwien.ac.at/research/publications/2019/wu-2019-bmc/wu-2019-bmc-image.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2019/wu-2019-bmc/wu-2019-bmc-image:thumb{{size}}.png" }, 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"supervisor", "ordernum": 0 }, { "publ_id": "sorger-2017-thesis", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "textures-3d-printing", "field_id": "supervisor", "ordernum": 2 }, { "publ_id": "Thurner-2005-IVR", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "vad_2015_phd", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Viola_Ivan_2013_HQ3", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "Viola-05-Smart", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "viola-2007-ort", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "Viola-Pondering-2017", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "vis-foa", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "waldin-2017-thesis", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Wihann_2017", "field_id": "supervisor", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=171", "__class": "Author" } ], "doi": "http://doi.org/10.1186/s12859-019-2779-4", "journal": "BMC Bioinformatics", "number": "187", "pages_from": "1", "pages_to": "20", "volume": "20", "research_areas": [ { "id": "BioVis", "drupal_id": 4127, "name": "Biological Data Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" }, { "id": "InfoVis", "drupal_id": 4128, "name": "Information Visualization and Visual Analytics", "short_abstract": "In this research area, our focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning. ", "abstract": "Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
\r\n", "website": "https://www.cg.tuwien.ac.at/research/area/InfoVis", "teaser": { "name": "teaser.png", "path": "research_area:InfoVis", "type": "image/png", "size": 60875, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/InfoVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "8564188", "arbesser_ba_2023", "Arleo-2019-vis", "Batik-2021", "batik-2021-gd", "bayat-2022-mva", "beham-2014-cupid", "bhore-2021-issac", "birsak-2014-agtb", "birsak-2017-dpe", "borgo-2013-gly", "borondy2022", "Bruckner_Stefan_2015_VAS", "bugnar-esk-2021", "byska-2019-mdfc", "Cai_2018", "casellato-2016-pkg", "Chen-Information-2016", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "daae-lampe-2010-dif", "Deutsch-2018", "Diehl_2015", "Diehl_2021", "dworschak-2016-szcm", "Eckelt_2018_01", "edlinger-2018-vwr", "eiweck-hnv-2021", "eschner-2023-evl", "Escribano_2017", "fourousan2021", "furmanova_2020", "Gadllah_Hani_2016", "Gall2020", "Ganuza_ML_2015_ISA", "georgiev-2019-cbg", "geyer_lukas_2015_prj", "geymayer-2017-std", "Groeller_2011_CW", "Groeller_2011_NR", "Groeller_2014_RWA", "Groeller_2016_P1", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2021-10", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V5_2020", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "gundacker-2020-wlm", "gusenbauer-2018", "gusenbauer-2018-P", "Heim_2021", "heim-gall-2020-dde", "Heinzl2021", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "karnik-09-shapegrammar", "Kehrer-2010-mom", "kehrer-2012-mod", "kehrer-2013-SBC", "Kehrer-2013-STAR", "klaffenboeck-thesis", "Klein_Tobias_2015TIV", "klein-2016-WCL", "koeppel-2021", "Kolter_2021", "Konyha_2013_IVA", "korpitsch-2021-lov", "Kuroko-2020-iV", "Laschober-2018", "li-2019-gdc", "lippeck-2022-mna", "louis-alexandre_dit_petit-frere-2022-veo", "magg2022", "mahler-2021-mdar", "martorell2022", "maruyama-2019-iv", "Matkovic_Kresimir_2015_", "Matkovic-2014-ieee", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "medeiros-2023-gwf", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_Haichao_2015_VQC", "miao2018Dimsum", "mizuno-2019-eurovis", "Muehlbacher_diss_2018", "musleh_maath_2021_mam", "musleh_maath-2021-mam1", "musleh_maath-2021-mam2", "musleh-2022-mam5", "Neubauer2020", "Nowak_2021", "ortner-2016-tunnel", "ortner-2016-visaware", "PH-2011-LDS", "Pilizar_-2020-bachelor", "pirch_2021_VRN", "pointner_simon-2020", "polatsek-2018-stv", "Presch_2020", "Priselac2021", "Purchase-2020-gd", "Purgathofer-2017-China1", "Purgathofer-2017-China2", "Purgathofer-2017-VC-Interface", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_bestphd", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2019_prsps", "Ribicic_2012_VAS", "Rippberger_2019", "sakr_sherif-2020-cacm", "samoul-2019-cnp", "sbardellati-2021-eveos", "schmidt-phd", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sikachev_peter-2011-protovis", "smiech-2018-tei", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger-2013-neuromap", "sorger-2015-litevis", "sorger-2015-taxintec", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "spegel-gruenberger-2020", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "steinschorn-2020-parameter", "stoff-concepMap-2021", "stritzel2022", "Strohmayer-2018-BT", "takahashi-2019-acdt", "Thomas-2018", "TR1862162", "Troidl_2019", "turner-aso", "unger-2019_vcp", "vad_viktor-2017-WVE", "vaico", "Vasileva-2018", "vasileva-2019-smw", "Wagner_032017", "wagner-2024-par", "waldin-2019-ccm", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "webGPU_aggregateVis-2023", "wolf-2023-cc", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-eurovis-star", "wu-2020-tvcg", "ymca", "YOGHOURDJIAN2019" ], "projects": [ "BioNetIllustration", "d9282", "d9522", "deskollage", "Scenario Pool" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=InfoVis", "__class": "ResearchArea" } ], "keywords": [ "Biological pathways", "Graph drawing", "Mapmetaphor", "Orthogonallayout", "Floorplanning", "Edgerouting" ], "weblinks": [ { "href": "https://www.youtube.com/watch?v=AhWCIGTxqAg", "caption": "video", "description": null, "main_file": 1 } ], "files": [ { "description": null, "filetitle": "image", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 256, "image_height": 192, "name": "wu-2019-bmc-image.png", "type": "image/png", "size": 107492, "path": "Publication:wu-2019-bmc", "url": "https://www.cg.tuwien.ac.at/research/publications/2019/wu-2019-bmc/wu-2019-bmc-image.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2019/wu-2019-bmc/wu-2019-bmc-image:thumb{{size}}.png" }, { "description": null, "filetitle": "paper", "main_file": true, "use_in_gallery": false, "access": "public", "name": "wu-2019-bmc-paper.pdf", "type": "application/pdf", "size": 8528804, "path": "Publication:wu-2019-bmc", "url": "https://www.cg.tuwien.ac.at/research/publications/2019/wu-2019-bmc/wu-2019-bmc-paper.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2019/wu-2019-bmc/wu-2019-bmc-paper:thumb{{size}}.png" } ], "projects_workgroups": [ { "id": "BioNetIllustration", "workgroup_id": "vis", "drupal_id": 4196, "name": "BioNetIllustration: User Centric Illustrations of Biological Networks", "name_de": null, "website": null, "status": "active", "short_abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "start_date": "2017-06-21", "end_date": "2019-06-20", "leader_id": 1464, "logo": { "name": "logo.png", "path": "project:BioNetIllustration", "type": "image/png", "size": 16337, "orig_name": "logo.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/BioNetIllustration/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "Horizon 2020", "contract_number": "747985", "comment": null } ], "research_areas": [ "BioVis", "InfoVis" ], "publications": [ "cmolik-2020-tvcg", "kouril-2018-LoL", "mizuno-2019-eurovis", "Purchase-2020-gd", "rinortner_susanne-2019-vpicc", "Sbardellati-2019-vcbm", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg", "YOGHOURDJIAN2019" ], "url": "https://www.cg.tuwien.ac.at/research/projects/BioNetIllustration", "__class": "Project" }, { "id": "illvisation", "workgroup_id": "vis", "drupal_id": 4171, "name": "Visual Computing: Illustrative Visualization", "name_de": null, "website": null, "status": "active", "short_abstract": "The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
\r\n", "website": "https://www.cg.tuwien.ac.at/research/area/InfoVis", "teaser": { "name": "teaser.png", "path": "research_area:InfoVis", "type": "image/png", "size": 60875, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/InfoVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "8564188", "arbesser_ba_2023", "Arleo-2019-vis", "Batik-2021", "batik-2021-gd", "bayat-2022-mva", "beham-2014-cupid", "bhore-2021-issac", "birsak-2014-agtb", "birsak-2017-dpe", "borgo-2013-gly", "borondy2022", "Bruckner_Stefan_2015_VAS", "bugnar-esk-2021", "byska-2019-mdfc", "Cai_2018", "casellato-2016-pkg", "Chen-Information-2016", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "daae-lampe-2010-dif", "Deutsch-2018", "Diehl_2015", "Diehl_2021", "dworschak-2016-szcm", "Eckelt_2018_01", "edlinger-2018-vwr", "eiweck-hnv-2021", "eschner-2023-evl", "Escribano_2017", "fourousan2021", "furmanova_2020", "Gadllah_Hani_2016", "Gall2020", "Ganuza_ML_2015_ISA", "georgiev-2019-cbg", "geyer_lukas_2015_prj", "geymayer-2017-std", "Groeller_2011_CW", "Groeller_2011_NR", "Groeller_2014_RWA", "Groeller_2016_P1", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2021-10", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V5_2020", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "gundacker-2020-wlm", "gusenbauer-2018", "gusenbauer-2018-P", "Heim_2021", "heim-gall-2020-dde", "Heinzl2021", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "karnik-09-shapegrammar", "Kehrer-2010-mom", "kehrer-2012-mod", "kehrer-2013-SBC", "Kehrer-2013-STAR", "klaffenboeck-thesis", "Klein_Tobias_2015TIV", "klein-2016-WCL", "koeppel-2021", "Kolter_2021", "Konyha_2013_IVA", "korpitsch-2021-lov", "Kuroko-2020-iV", "Laschober-2018", "li-2019-gdc", "lippeck-2022-mna", "louis-alexandre_dit_petit-frere-2022-veo", "magg2022", "mahler-2021-mdar", "martorell2022", "maruyama-2019-iv", "Matkovic_Kresimir_2015_", "Matkovic-2014-ieee", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "medeiros-2023-gwf", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_Haichao_2015_VQC", "miao2018Dimsum", "mizuno-2019-eurovis", "Muehlbacher_diss_2018", "musleh_maath_2021_mam", "musleh_maath-2021-mam1", "musleh_maath-2021-mam2", "musleh-2022-mam5", "Neubauer2020", "Nowak_2021", "ortner-2016-tunnel", "ortner-2016-visaware", "PH-2011-LDS", "Pilizar_-2020-bachelor", "pirch_2021_VRN", "pointner_simon-2020", "polatsek-2018-stv", "Presch_2020", "Priselac2021", "Purchase-2020-gd", "Purgathofer-2017-China1", "Purgathofer-2017-China2", "Purgathofer-2017-VC-Interface", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_bestphd", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2019_prsps", "Ribicic_2012_VAS", "Rippberger_2019", "sakr_sherif-2020-cacm", "samoul-2019-cnp", "sbardellati-2021-eveos", "schmidt-phd", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sikachev_peter-2011-protovis", "smiech-2018-tei", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger-2013-neuromap", "sorger-2015-litevis", "sorger-2015-taxintec", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "spegel-gruenberger-2020", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "steinschorn-2020-parameter", "stoff-concepMap-2021", "stritzel2022", "Strohmayer-2018-BT", "takahashi-2019-acdt", "Thomas-2018", "TR1862162", "Troidl_2019", "turner-aso", "unger-2019_vcp", "vad_viktor-2017-WVE", "vaico", "Vasileva-2018", "vasileva-2019-smw", "Wagner_032017", "wagner-2024-par", "waldin-2019-ccm", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "webGPU_aggregateVis-2023", "wolf-2023-cc", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-eurovis-star", "wu-2020-tvcg", "ymca", "YOGHOURDJIAN2019" ], "projects": [ "BioNetIllustration", "d9282", "d9522", "deskollage", "Scenario Pool" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=InfoVis", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [ { "href": "https://dl.ccf.org.cn/institude/institudeDetail?id=4320599515842560&_ack=1", "caption": null, "description": null, "main_file": 0 } ], "files": [ { "description": null, "filetitle": "paper", "main_file": true, "use_in_gallery": false, "access": "public", "name": "wu-2019-report-paper.pdf", "type": "application/pdf", "size": 8399742, "path": "Publication:wu-2019-report", "url": "https://www.cg.tuwien.ac.at/research/publications/2019/wu-2019-report/wu-2019-report-paper.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2019/wu-2019-report/wu-2019-report-paper:thumb{{size}}.png" } ], "projects_workgroups": [ { "id": "BioNetIllustration", "workgroup_id": "vis", "drupal_id": 4196, "name": "BioNetIllustration: User Centric Illustrations of Biological Networks", "name_de": null, "website": null, "status": "active", "short_abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "start_date": "2017-06-21", "end_date": "2019-06-20", "leader_id": 1464, "logo": { "name": "logo.png", "path": "project:BioNetIllustration", "type": "image/png", "size": 16337, "orig_name": "logo.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/BioNetIllustration/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "Horizon 2020", "contract_number": "747985", "comment": null } ], "research_areas": [ "BioVis", "InfoVis" ], "publications": [ "cmolik-2020-tvcg", "kouril-2018-LoL", "mizuno-2019-eurovis", "Purchase-2020-gd", "rinortner_susanne-2019-vpicc", "Sbardellati-2019-vcbm", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg", "YOGHOURDJIAN2019" ], "url": "https://www.cg.tuwien.ac.at/research/projects/BioNetIllustration", "__class": "Project" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2019/wu-2019-report/", "__class": "Publication" }, { "id": "waldin-2019-ccm", "type_id": "journalpaper_notalk", "tu_id": null, "repositum_id": null, "title": "Cuttlefish: Color Mapping for Dynamic Multi‐Scale Visualizations", "date": "2019-03", "abstract": "Visualizations of hierarchical data can often be explored interactively. For example, in geographic visualization, there are continents, which can be subdivided into countries, states, counties and cities. Similarly, in models of viruses or bacteria at the highest level are the compartments, and below that are macromolecules, secondary structures (such as α‐helices), amino‐acids, and on the finest level atoms. Distinguishing between items can be assisted through the use of color at all levels. However, currently, there are no hierarchical and adaptive color mapping techniques for very large multi‐scale visualizations that can be explored interactively. We present a novel, multi‐scale, color‐mapping technique for adaptively adjusting the color scheme to the current view and scale. Color is treated as a resource and is smoothly redistributed. The distribution adjusts to the scale of the currently observed detail and maximizes the color range utilization given current viewing requirements. Thus, we ensure that the user is able to distinguish items on any level, even if the color is not constant for a particular feature. The coloring technique is demonstrated for a political map and a mesoscale structural model of HIV. The technique has been tested by users with expertise in structural biology and was overall well received.", "authors_et_al": false, "substitute": null, "main_image": { "description": "Multiple color zoom levels. ", "filetitle": "teaser", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 509, "image_height": 447, "name": "waldin-2019-ccm-teaser.png", "type": "image/png", "size": 690229, "path": "Publication:waldin-2019-ccm", "url": "https://www.cg.tuwien.ac.at/research/publications/2019/waldin-2019-ccm/waldin-2019-ccm-teaser.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2019/waldin-2019-ccm/waldin-2019-ccm-teaser:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1339, "drupal_id": null, "orcid_id": null, "website": null, "firstname": "Nicholas", "lastname": "Waldin", "searchname": "Nicholas Waldin", "is_teacher": false, "name": "Nicholas Waldin", "publications": [ "waldin-2019-ccm" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "Plank_Pascal_2015_HVP", "field_id": "supervisor", "ordernum": 1 }, { "publ_id": 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"sietzen-2021-perturber", "sietzen-ifv-2019", "sMolBoxes_2022", "sorger-2019-odn", "sorger-2021-egonet", "steinboeck-2018-lbg", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2017_FlickerObserver", "waldin-2019-ccm", "Waldner_2017_11", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-af", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2018-ved", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "webGPU_aggregateVis-2023", "wu-2021", "wu-2021-vi" ], "publications_first": [], "project_leader": [ "d9282", "d9522", "d9555", "deskollage" ], "publication_field": [ { "publ_id": "arbesser_ba_2023", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "bayat-2022-mva", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "boesch_2014_browserHistoryVis", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "breitenecker-2020-bct", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "bugnar-esk-2021", "field_id": "supervisor", "ordernum": 0 }, { 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"tut-vis-2006", "tut-vis-2007", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_2013_IDV", "Viola_Ivan_2013_CAI", "Viola_Ivan_2013_D3D", "Viola_Ivan_2013_DC", "Viola_Ivan_2013_GS", "Viola_Ivan_2013_HQ3", "Viola_Ivan_2013_RMA", "Viola_Ivan_2013_RSb", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_DAC", "Viola_Ivan_IIP", "Viola_Ivan_UVP", "Viola_Ivan_VDP", "Viola-05-Smart", "Viola-2003-GPU", "Viola-2003-Har", "viola-2003-hbn", "Viola-2003-NON", "viola-2004-gbf", "Viola-2004-GPU", "viola-2004-har", "viola-2004-har2", "viola-2004-idv", "viola-2004-imp", "Viola-2004-ImpX", "Viola-2004-ImpX2", "viola-2005-imp", "viola-2006-FoA", "viola-2007-ort", "viola-evr", "Viola-Pondering-2017", "viola-popular-article-2006", "Viola-vistutillustrativevis", "vis-foa", "vitruvian_2019", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2016_Colormaps", "Waldin_Nicholas_2016_Individualization", 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"Plank_Pascal_2015_HVP", "field_id": "supervisor", "ordernum": 2 }, { "publ_id": "plank-2017-sldg", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "puenguentzky-2014-ht", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "raidou_vcbm14", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "rasch-2016-imgses", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "rautek-2009-vmv", "field_id": "co_supervisor", "ordernum": 0 }, { "publ_id": "Reisacher_Matthias_CPW", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "sbardellati_ba_2018", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "sifuentes-2018-crowd", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "sorger-2017-thesis", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "textures-3d-printing", "field_id": "supervisor", "ordernum": 2 }, { "publ_id": "Thurner-2005-IVR", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "vad_2015_phd", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Viola_Ivan_2013_HQ3", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "Viola-05-Smart", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "viola-2007-ort", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "Viola-Pondering-2017", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "vis-foa", "field_id": "lecturer", "ordernum": 0 }, { "publ_id": "waldin-2017-thesis", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "Wihann_2017", "field_id": "supervisor", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=171", "__class": "Author" } ], "doi": "10.1111/cgf.13611", "journal": "Computer Graphics Forum", "number": "6", "pages_from": "150", "pages_to": "164", "volume": "38", "research_areas": [ { "id": "BioVis", "drupal_id": 4127, "name": "Biological Data Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" }, { "id": "InfoVis", "drupal_id": 4128, "name": "Information Visualization and Visual Analytics", "short_abstract": "In this research area, our focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning. ", "abstract": "Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
\r\n", "website": "https://www.cg.tuwien.ac.at/research/area/InfoVis", "teaser": { "name": "teaser.png", "path": "research_area:InfoVis", "type": "image/png", "size": 60875, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/InfoVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "8564188", "arbesser_ba_2023", "Arleo-2019-vis", "Batik-2021", "batik-2021-gd", "bayat-2022-mva", "beham-2014-cupid", "bhore-2021-issac", "birsak-2014-agtb", "birsak-2017-dpe", "borgo-2013-gly", "borondy2022", "Bruckner_Stefan_2015_VAS", "bugnar-esk-2021", "byska-2019-mdfc", "Cai_2018", "casellato-2016-pkg", "Chen-Information-2016", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "daae-lampe-2010-dif", "Deutsch-2018", "Diehl_2015", "Diehl_2021", "dworschak-2016-szcm", "Eckelt_2018_01", "edlinger-2018-vwr", "eiweck-hnv-2021", "eschner-2023-evl", "Escribano_2017", "fourousan2021", "furmanova_2020", "Gadllah_Hani_2016", "Gall2020", "Ganuza_ML_2015_ISA", "georgiev-2019-cbg", "geyer_lukas_2015_prj", "geymayer-2017-std", "Groeller_2011_CW", "Groeller_2011_NR", "Groeller_2014_RWA", "Groeller_2016_P1", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2021-10", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V5_2020", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "gundacker-2020-wlm", "gusenbauer-2018", "gusenbauer-2018-P", "Heim_2021", "heim-gall-2020-dde", "Heinzl2021", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "karnik-09-shapegrammar", "Kehrer-2010-mom", "kehrer-2012-mod", "kehrer-2013-SBC", "Kehrer-2013-STAR", "klaffenboeck-thesis", "Klein_Tobias_2015TIV", "klein-2016-WCL", "koeppel-2021", "Kolter_2021", "Konyha_2013_IVA", "korpitsch-2021-lov", "Kuroko-2020-iV", "Laschober-2018", "li-2019-gdc", "lippeck-2022-mna", "louis-alexandre_dit_petit-frere-2022-veo", "magg2022", "mahler-2021-mdar", "martorell2022", "maruyama-2019-iv", "Matkovic_Kresimir_2015_", "Matkovic-2014-ieee", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "medeiros-2023-gwf", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_Haichao_2015_VQC", "miao2018Dimsum", "mizuno-2019-eurovis", "Muehlbacher_diss_2018", "musleh_maath_2021_mam", "musleh_maath-2021-mam1", "musleh_maath-2021-mam2", "musleh-2022-mam5", "Neubauer2020", "Nowak_2021", "ortner-2016-tunnel", "ortner-2016-visaware", "PH-2011-LDS", "Pilizar_-2020-bachelor", "pirch_2021_VRN", "pointner_simon-2020", "polatsek-2018-stv", "Presch_2020", "Priselac2021", "Purchase-2020-gd", "Purgathofer-2017-China1", "Purgathofer-2017-China2", "Purgathofer-2017-VC-Interface", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_bestphd", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2019_prsps", "Ribicic_2012_VAS", "Rippberger_2019", "sakr_sherif-2020-cacm", "samoul-2019-cnp", "sbardellati-2021-eveos", "schmidt-phd", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sikachev_peter-2011-protovis", "smiech-2018-tei", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger-2013-neuromap", "sorger-2015-litevis", "sorger-2015-taxintec", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "spegel-gruenberger-2020", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "steinschorn-2020-parameter", "stoff-concepMap-2021", "stritzel2022", "Strohmayer-2018-BT", "takahashi-2019-acdt", "Thomas-2018", "TR1862162", "Troidl_2019", "turner-aso", "unger-2019_vcp", "vad_viktor-2017-WVE", "vaico", "Vasileva-2018", "vasileva-2019-smw", "Wagner_032017", "wagner-2024-par", "waldin-2019-ccm", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "webGPU_aggregateVis-2023", "wolf-2023-cc", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-eurovis-star", "wu-2020-tvcg", "ymca", "YOGHOURDJIAN2019" ], "projects": [ "BioNetIllustration", "d9282", "d9522", "deskollage", "Scenario Pool" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=InfoVis", "__class": "ResearchArea" } ], "keywords": [ "multiscale visualization", "illustrative visualization", "molecular visualization" ], "weblinks": [ { "href": "https://onlinelibrary.wiley.com/doi/10.1111/cgf.13611", "caption": "Open Access Article in Wiley Online Library", "description": null, "main_file": 1 } ], "files": [ { "description": "Multiple color zoom levels. ", "filetitle": "teaser", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 509, "image_height": 447, "name": "waldin-2019-ccm-teaser.png", "type": "image/png", "size": 690229, "path": "Publication:waldin-2019-ccm", "url": "https://www.cg.tuwien.ac.at/research/publications/2019/waldin-2019-ccm/waldin-2019-ccm-teaser.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2019/waldin-2019-ccm/waldin-2019-ccm-teaser:thumb{{size}}.png" } ], "projects_workgroups": [ { "id": "vis", "drupal_id": 1354, "name": "Visualization Group", "website": "https://www.cg.tuwien.ac.at/group/Visualization-Group", "projects": [ "ADAPT", "AngioVis", "Animated Cell Tab development", "AutARG", "avr", "BioNetIllustration", "COMRADE", "d4328", "d4335", "d4534", "d9275", "d9282", "d9522", "d9555", "deskollage", "diagvis", "exvisation", "Illustrare", "illvisation", "KASI", "ManyViews", "NeuroViewer", "ProcessIllVis", "ProKeyAnim", "PVG", "Scale-VS", "Scenario Pool", "Semantic Steering", "Sim-CT", "Smart-CT", "Smile Analytics", "ViMaL", "VISAR" ], "research_areas": [ "BioVis", "IllVis", "InfoVis", "MedVis", "NetVis", "Perception", "VisMat", "VR" ], "publications": [ "2013_Viola_Ivan_2013_MTS", "2015-image-coll", "2017-kouril-illcell", "2019-ic", "AA2020", "alacruzECR2004", "alacruzVisSym2004", "Alharbi_2021", "Alsallakh_2012_RCW", "alsallakh-2009-iva", "altendorfer-2008-vts", "amabili2021", "amirkhanov_2012", "amirkhanov_2012heur", "amirkhanov-2011", "amirkhanov-2014-ama", "amirkhanov-2018-withteeth", "amirkhanov-2021-diss", "amirkhanov2010AMA", "ammer-2008-lst", "An-2018-CHI", "AndreUrsits_2013_APP", "antes-2023-vhv", "Antonini2020", "arbesser_ba_2023", "Artner-2004-Hig", "Artner-2005-Hig", "Artner-2005-Thesis", "audioflow", "Auzinger_Mistelbauer_2013_CSR", "balabanian-2007-ant", "balabanian-2008-hvv", "Balabanian-2010-IIV", "Balabanian-2010-PSDSV", "Balduz_01", "Basch_2011_ATA", "Bauer_David_2018", "Bauer_Johannes_2014_IWB", "bauer-2015-cbfd", "Bayat_2019", "bayer-2015-gapaot", "bbeer-2013", "Bechtold2020", "Beer_2011_DVE", "Beham_Michael_PSC", "beham-2014-cupid", "bernhard-2006-dvrcta", "bernhard-2014-GTOM", "bernhard-2016-gft", "Bernold_2019", "bernold-2019-epr", "bhore-2021-issac", "birkeland_aasmund_2014_pums", "Birkeland-2012-IMC", "BirsakHanzl-2009", "boeroendy-2022-uio", "boesch_2014_browserHistoryVis", "borgo-2013-gly", "borondy2022", "bouzari-thesis", "Brandorff-08-OV", "brandorff-2009-erv", "brandstaetter_01", "brandstaetter-2007-vosd", "Brandstaetter2020", "breitenecker-2020-bct", "bront-2023-svo", "brucker-2010-RES", "Bruckner_Stefan_2015_VAS", "bruckner-2004-EVV", "bruckner-2005-AIV", "bruckner-2005-ATI", "bruckner-2005-ICV", "bruckner-2005-vid", "bruckner-2005-VIS", "bruckner-2006-EVV", "bruckner-2006-ICE", "bruckner-2007-EDF", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2008-IVV", "bruckner-2009-BVQ", "bruckner-2009-IVV", "bruckner-2010-HVC", "bruckner-2010-IFC", "bruckner-2010-ISM", "bruckner-2010-SES", "Bruckner-2012-VEA", "buerger_raphael_2006_3dpoly", "Buerger-2007-cmv", "Buerger-2007-eurovis", "buerger-2007-star", "bugnar-esk-2021", "burns-2007-fea", "bydlinski-2015-gapaot", "byska-2019-mdfc", "Cai_2018", "Caic2021", "Carata_2011_IVE", "carbesser-2013", "casellato-2016-pkg", "cellVIEW_2015", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "Cornel_Daniel_2015_VOC", "Cornel2016CFM", "coto-2005-MAC", "Cruz-thesis", "Csebfalvi-2002-FPVF", "Csebfalvi-2002-SBICG", "Csebfalvi-2002-Smo", "Csebfalvi-2012-IOM", "Csuk_2011", "daae-lampe-2010-dif", "dataset-christmastree", "dataset-present", "dataset-stagbeetle", "Deutsch-2018", "Dhanoa_2021", "Diehl_2015", "Diehl_2021", "Diehl-2017-Albero", "Dietrich_1", "dietrich-2016-viseq2", "diss-thesis-bratislava", "diss-thesis-magdeburg", "diss-thesis-siegen", "djuric-2020-wvo", "donabauer_2019_1", "donabauer-2015-asc", "draeger-2005-chain", "dworschak-2016-szcm", "dworschak-2016-szcm", "Eckelt_2017", "Eckelt_2018_01", "Edi_2019_10_01", "edlinger-2018-vwr", "eg-tut2005-iv", "Ehlers_PhD", "ehlers-2023-iro", "ehlers-thesis", "Eichner2022", "eiweck-hnv-2021", "emsenhuber-2008-vhd", "eschner-2023-evl", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Essler2022", "EuroVis2018-ShortPapers-Karall", "EuroVis2018-ShortPapers-Reiter", "facial2004", "Fechter_2011_DBS", "filipovic-2014-dect", "FISCHL-2012-CTASEG", "fmistelbauer-2014-ad", "fmistelbauer-2014-adict", "Ford-2012-HRV", "fourousan2021", "freiler-2008-ste", "fritz-2009-ieq", "Froehler_Berhnard_2015_ESM", "froschauer-2009-iod", "Fruehstueck_Anna_2015_DOM", "fuchs_raphael_2007_par", "fuchs_vhml", "fuchs-2008-del", "fuchs-vortex", "furmanova_2020", "gadllah_2016", "Gadllah_Hani_2016", "gall_2016", "Gall_2017", "gall_alexander_2016BA", "Gall2020", "Gall2021", "gangl-2018-gpsart", "Ganglberger-2022-cg", "ganglberger2019", "Ganuza", "Ganuza_2015", "Ganuza_MJ_2015_AVe", "Ganuza_ML_2015_ISA", "Ganuza-2017-IVCSGM", "Gavrilescu_2011_VGP", "gavrilescu-2008-vsc", "gavrilescu-2009-postrend", "Gavrilescu-2010-CIE", "Gehrer_Daniel_CUI", "Gehrer-2017", "Gehrer-2017-molmach", "georgiev-2019-cbg", "gerl-2006-vhi", "geymayer-2017-std", "Gietl_2020", "Gillmann2021", "glanznig-2009-LAMC", "glinzner-2016-tex", "Gogel2020", "gostler-2015-3dp", "grammatikaki-thesis", "grimm-2004-arefined", "GRIMM-2004-FDMX-P", "grimm-2004-memory", "GRIMM-2004-PPC", "grimm-2004-volume", "Groeller_2011_CVC", "Groeller_2011_CW", "Groeller_2011_GBC", "Groeller_2011_HP", "Groeller_2011_HSU", "Groeller_2011_IPV", "Groeller_2011_IVP", "Groeller_2011_NR", "Groeller_2011_NSM", "Groeller_2011_VCD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSS", "Groeller_2012_KAV", "Groeller_2012_VBP", "Groeller_2012_ViV", "Groeller_2012_VV", "Groeller_2014_CaQ", "Groeller_2014_CQV", "Groeller_2014_CV", "Groeller_2014_RWA", "Groeller_2014_STC", "Groeller_2014_UPS", "Groeller_2014_VND", "Groeller_2016_I2", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2016_P7", "Groeller_2021_11", "Groeller_2021_BVM", "Groeller_2021-10", "Groeller_Edi_2013_TVC", "Groeller_Edi_2013_VCQ", "Groeller_Edi_2013TVCK", "Groeller_Edi_VKA", "Groeller_Eduard_2014_THS", "Groeller_Eduard_2014_TSP", "Groeller_Eduard_2014_UCT", "Groeller_Eduard_2015_SMV", "Groeller_Eduard_2015_TCU", "Groeller_V1_2020", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V42020", "Groeller_V5_2020", "groeller-2004-efficient", "groeller-2004-imp", "groeller-2004-sci", "groeller-2005-dia", "Groeller-2010-CVC", "Groeller-2010-IFI", "Groeller-2010-IVVI", "Groeller-2011-HSH", "Groeller-2017-ARTORW", "Groeller-2017-AVC", "Groeller-2017-IVAMCS", "Groeller-2017-PTPMD", "Groller_2021-12-03", "Gronde_2008", "Grorller-2010-IVV", "grossmann_2019_pelvisrunner_poster", "Grossmann_MA", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "grossmann-thesis", 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"viola-2006-FoA", "viola-evr", "Viola-Pondering-2017", "viola-popular-article-2006", "Viola-vistutillustrativevis", "vis-foa", "VisWeek-Tutorial-2012-Uncertainty", "vitruvian_2019", "voglreiter-2023-tro", "Vucenovic_2022", "vucini_2006", "vucini_2008_rnp", "vucini_2009", "vucini_erald-2007-FRI", "vucini-2009-phd", "vucini-2011", "Wagner_032017", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2017_FlickerObserver", "Waldin_Nicholas_2017_FlickerObserver", "Waldin_Nicholas_2017_FlickerObserver", "waldin-2017-thesis", "waldin-2019-ccm", "waldin-2019-ccm", "Waldner_2017_11", "Waldner_2017_11", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-af", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2018-ved", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "Waser-2010-WL", "webGPU_aggregateVis-2023", "weiner_2011", "Weissenboeck_2019", "Weissenboeck_2019_PhD", "weissenboeck-2014", "Wihann_2017", "wolf-2023-cc", "Woschizka_2021", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg", "wu-2021", "wu-2021-vi", "xmastree2002", "xmastree2005", "ymca", "YOGHOURDJIAN2019", "Zambal-2003-SWA", "zambal-2005-3dact", "Zaufel_2021", "zauner-2013-svkinect", "zechmeister2020", "Zeng_2021", "Zhu-2014-flowvis" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Workgroup&id=vis", "__class": "Workgroup" }, { "id": "deskollage", "workgroup_id": "vis", "drupal_id": 4198, "name": "Visual Information Foraging on the Desktop", "name_de": null, "website": null, "status": "active", "short_abstract": "The goal of this project is to design and develop novel interactive visualization techniques to support knowledge workers in making sense of their unstructured, dynamic information collections. ", "abstract": "Knowledge workers, such as scientists, journalists, or consultants, adaptively seek, gather, and consume information. Initially, knowledge workers may not even know what exactly they are looking for. Only after investigating more and more information, they develop a more concrete mental picture. These “information foraging” and “sensemaking” processes are often inefficient as existing user interfaces provide limited possibilities to combine information from various sources and different formats into a common knowledge representation. The goal of this project was to facilitate such knowledge-intensive tasks through user interfaces that combine manual organization strategies, such as piling of papers and text annotations, with powerful automatic data processing to reveal hidden relations in the collected data.\n \nThis project led to multiple novel user interface concepts that support knowledge-intensive tasks. For instance, visual query expansion is an extension to a search engine that visualizes the effects of suggested variations on an online query result to help users to refine their query terms. The information collage lets users capture information fragments from any online sources, which can then be freely recomposed into a common knowledge representation. Natural language processing helps users to identify common topics in their collage. BiCFlows helps users to discover hidden relations in very large information collections. For instance, they can explore which authors tend to contribute to similar topics. \n\nThe user interfaces served as foundation for empirical research with users from different knowledge work domains. This research provided new insights into the strengths but also the limitations of interactive visualization for information foraging and sensemaking. On the one hand, the studies show that, in some situations, interactive visualization can be less efficient than working with unprocessed text-based information. On the other hand, the studies also show that combining automatic data analysis with interactive visualization can lead to more unexpected findings, especially when exploring large data. The extent of manual information organization varies with the task: the less users know about the gathered information, the more automatic organization they expect. \n\nIn summary, this project contributed novel user interface concepts and design guidelines for user interfaces supporting information foraging and sensemaking. The techniques and study results were published at high-ranking peer-reviewed venues, and it can be expected that the findings of this project shape the way how users seek and organize their information in the future. \n\n", "start_date": "2015-12-01", "end_date": "2018-12-31", "leader_id": 1110, "logo": { "name": "logo.png", "path": "project:deskollage", "type": "image/png", "size": 331697, "orig_name": "logo.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/deskollage/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "fwf", "contract_number": "T 752-N30", "comment": null } ], "research_areas": [ "InfoVis" ], "publications": [ "2019-ic", "byska-2019-mdfc", "casellato-2016-pkg", "cizmic-2018-evd", "donabauer-2015-asc", "dworschak-2016-szcm", "edlinger-2018-vwr", "georgiev-2019-cbg", "geymayer-2017-std", "gundacker-2020-wlm", "gusenbauer-2018", "hromniak-2019-vcn", "Koszticsak-2017-ewt", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "polatsek-2018-stv", "samoul-2019-cnp", "sietzen-2019-wnn", "sietzen-ifv-2019", "smiech-2018-tei", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "trautner-2018-imd", "unger-2019_vcp", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2017_FlickerObserver", "waldin-2019-ccm", "Waldner_2017_11", "waldner-2017-vph", "waldner-2018-ved", "waldner-2019-rld", "waldner-2020-tbg" ], "url": "https://www.cg.tuwien.ac.at/research/projects/deskollage", "__class": "Project" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2019/waldin-2019-ccm/", "__class": "Publication" }, { "id": "Weissenboeck_2019", "type_id": "journalpaper_notalk", "tu_id": 283895, "repositum_id": null, "title": "Dynamic Volume Lines: Visual Comparison of 3D Volumes through Space-filling Curves", "date": "2019-01", "abstract": "The comparison of many members of an ensemble is difficult, tedious, and error-prone, which is aggravated by often justsubtle differences. In this paper, we introduceDynamic Volume Linesfor the interactive visual analysis and comparison of sets of 3Dvolumes. Each volume is linearized along a Hilbert space-filling curve into a 1D Hilbert line plot, which depicts the intensities over theHilbert indices. We present a nonlinear scaling of these 1D Hilbert line plots based on the intensity variations in the ensemble of 3Dvolumes, which enables a more effective use of the available screen space. The nonlinear scaling builds the basis for our interactivevisualization techniques. An interactive histogram heatmap of the intensity frequencies serves as overview visualization. When zoomingin, the frequencies are replaced by detailed 1D Hilbert line plots and optional functional boxplots. To focus on important regions of thevolume ensemble, nonlinear scaling is incorporated into the plots. An interactive scaling widget depicts the local ensemble variations.Our brushing and linking interface reveals, for example, regions with a high ensemble variation by showing the affected voxels ina 3D spatial view. We show the applicability of our concepts using two case studies on ensembles of 3D volumes resulting fromtomographic reconstruction. In the first case study, we evaluate an artificial specimen from simulated industrial 3D X-ray computedtomography (XCT). In the second case study, a real-world XCT foam specimen is investigated. Our results show thatDynamic VolumeLinescan identify regions with high local intensity variations, allowing the user to draw conclusions, for example, about the choice ofreconstruction parameters. Furthermore, it is possible to detect ring artifacts in reconstructions volumes.I", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "image", "main_file": true, "use_in_gallery": true, "access": "public", "image_width": 148, "image_height": 141, "name": "Weissenboeck_2019-image.JPG", "type": "image/jpeg", "size": 15246, "path": "Publication:Weissenboeck_2019", "url": "https://www.cg.tuwien.ac.at/research/publications/2019/Weissenboeck_2019/Weissenboeck_2019-image.JPG", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2019/Weissenboeck_2019/Weissenboeck_2019-image:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1169, "drupal_id": null, "orcid_id": null, "website": "http://research.fh-ooe.at/de/staff/34016", "firstname": "Johannes", "lastname": "Weissenböck", "searchname": "Johannes Weissenböck", "is_teacher": false, "name": "Johannes Weissenböck", 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"zechmeister2020", "Zeng_2021", "Zhu-2014-flowvis" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Workgroup&id=vis", "__class": "Workgroup" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2019/Weissenboeck_2019/", "__class": "Publication" }, { "id": "Miao_2019", "type_id": "journalpaper_notalk", "tu_id": 272339, "repositum_id": null, "title": "Multiscale Molecular Visualization", "date": "2019-01", "abstract": "We provide a high-level survey of multiscale molecular visualization techniques, with a focus on application-domain questions, challenges, and tasks. We provide a general introduction to molecular visualization basicsand describe a number of domain-specific tasks that drive this work. These tasks, in turn, serve as the generalstructure of the following survey. First, we discuss methods that support the visual analysis of moleculardynamics simulations. We discuss, in particular, visual abstraction and temporal aggregation. In the secondpart, we survey multiscale approaches that support the design, analysis, and manipulation of DNAnanostructures and related concepts for abstraction, scale transition, scale-dependent modeling, andnavigation of the resulting abstraction spaces. In the third part of the survey, we showcase approaches thatsupport interactive exploration within large structural biology assemblies up to the size of bacterial cells.We describe fundamental rendering techniques as well as approaches for element instantiation, visibilitymanagement, visual guidance, camera control, and support of depth perception. 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Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", 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"zechmeister2020", "Zeng_2021", "Zhu-2014-flowvis" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Workgroup&id=vis", "__class": "Workgroup" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2019/Miao_2019/", "__class": "Publication" }, { "id": "raidou2018visualflatter", "type_id": "journalpaper", "tu_id": null, "repositum_id": null, "title": "VisualFlatter - Visual Analysis of Distortions in the Projection of Biomedical Structures", "date": "2018-09", "abstract": "Projections of complex anatomical or biological structures from 3D to 2D are often used by visualization and domain experts\nto facilitate inspection and understanding. Representing complex structures, such as organs or molecules, in a simpler 2D\nway often requires less interaction, while enabling comparability. However, the most commonly employed projection methods\nintroduce size or shape distortions, in the resulting 2D representations. While simple projections display known distortion\npatterns, more complex projection algorithms are not easily predictable.We propose the VisualFlatter, a visual analysis tool that\nenables visualization and domain experts to explore and analyze projection-induced distortions, in a structured way. Our tool\nprovides a way to identify projected regions with semantically relevant distortions and allows users to comparatively analyze\ndistortion outcomes, either from alternative projection methods or due to different setups through the projection pipeline. The\nuser is given the ability to improve the initial projection configuration, after comparing different setups. We demonstrate the\nfunctionality of our tool using four scenarios of 3D to 2D projections, conducted with the help of domain or visualization experts\nworking on different application fields. We also performed a wider evaluation with 13 participants, familiar with projections,\nto assess the usability and functionality of the Visual Flatter.", "authors_et_al": false, "substitute": null, "main_image": null, "sync_repositum_override": null, "authors": [ { "id": 1366, "drupal_id": 1304, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/NicolasGrossmann", "firstname": "Nicolas", "lastname": "Grossmann", "searchname": "Nicolas Grossmann", "is_teacher": false, "name": "Nicolas Grossmann", "publications": [ "furmanova_2020", "grossmann_2019_pelvisrunner_poster", "Grossmann_MA", "grossmann-2016-baa", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "grossmann-thesis", "Iijima-2020-iV", "Kuroko-2020-iV", "raidou_2019_pelvisrunner", "raidou_visgap2020", "raidou2018visualflatter", "wu-2021", "wu-2021-vi" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "mayr-2021-wec", "field_id": "supervisor", "ordernum": 0 }, { "publ_id": "raidou_2019_pelvisrunner", "field_id": "lecturer", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1366", "__class": "Author" }, { "id": 1367, "drupal_id": null, "orcid_id": null, "website": null, "firstname": "Thomas", "lastname": "Köppel", "searchname": "Thomas Köppel", "is_teacher": false, "name": "Thomas Köppel", "publications": [ "koeppel-2016-baa", "koeppel-2021", "Koeppel2020", "raidou2018visualflatter", "Thomas-2018" ], "publications_first": [], "project_leader": [], "publication_field": [], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1367", "__class": "Author" }, { "id": 166, "drupal_id": 111, "orcid_id": "0000-0002-8569-4149", "website": "https://www.cg.tuwien.ac.at/staff/EduardGröller", "firstname": "Eduard", "lastname": "Gröller", "searchname": "Eduard Gröller", "is_teacher": true, "name": "Eduard Gröller", "publications": [ "a-2001-ah", "a-2001-ahr", "a-2001-Rec", 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"groeller-1994-appl", "Groeller-1994-AVT", "groeller-1994-coh", "Groeller-1994-CSA", "groeller-1994-ext", "Groeller-1994-HIS", "groeller-1994-hyper", "Groeller-1994-IDN", "groeller-1994-int", "Groeller-1994-ITV", "groeller-1994-mod", "Groeller-1994-MRN", "groeller-1994-tech", "groeller-1994-vis", "groeller-1995-appl", "groeller-1995-attract", "Groeller-1995-CCG", "groeller-1995-dyn", "Groeller-1995-GOW", "Groeller-1995-IED", "groeller-1995-inter", "groeller-1995-lok", "groeller-1995-mod", "groeller-1995-non", "Groeller-1995-SDC", "groeller-1995-vis", "groeller-1996-ACE", "groeller-1996-avn", "Groeller-1998-TunVis", "Groeller-1998-VAD", "Groeller-1998-VDS", "Groeller-1999-Dat", "Groeller-1999-Vis", "Groeller-2000-Vis", "Groeller-2001-IDV", "groeller-2002-anw", "Groeller-2002-Ins", "groeller-2002-med", "groeller-2002-wiss", "groeller-2003-fea", "groeller-2003-med", "groeller-2003-scie", "groeller-2003-vol", "groeller-2004-efficient", "groeller-2004-imp", "groeller-2004-sci", "groeller-2005-abs", "groeller-2005-dia", "groeller-2005-foc", "groeller-2005-imp", "groeller-2005-impo", "groeller-2005-proc", "groeller-2005-sma", "groeller-2005-smar", "groeller-2005-volg", "groeller-2006-cgf", "groeller-2006-civ", "groeller-2006-ivt", "groeller-2006-tvcg", "groeller-2007-csu", "groeller-2007-fci", "groeller-2007-mva", "groeller-2007-vis", "groeller-2007-visII", "groeller-2007-vws", "groeller-2008-att2", "groeller-2008-How", "groeller-2008-hsp", "groeller-2008-irs", "groeller-2008-kav2", "groeller-2008-kav3", "groeller-2008-kav4", "groeller-2008-lsy", "Groeller-2010-CVC", "groeller-2010-How", "Groeller-2010-IFI", "Groeller-2010-IVVI", "groeller-2010-PTT", "Groeller-2011-HSH", "Groeller-2017-AMOS", "Groeller-2017-ARTORW", "Groeller-2017-AVC", "Groeller-2017-IVAMCS", "Groeller-2017-PTPMD", "groeller-2022-iva", "groeller-2022-iva-1", "groeller-2022-ivd", "groeller-2023-ivd", "groeller-2023-siv", "groeller-2023-siv-1", "groeller-2023-siv-2", "groeller-2023-tfo", 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Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "MedVis", "drupal_id": 4133, "name": "Medical Visualization", "short_abstract": "This research area bridges the gap between visualization and medicine by providing comprehensible visual means to detect diseased regions or to aid clinical treatment decisions.", "abstract": "In collaboration with hospitals we try to investigate various topics in medicine by means of visualization or visual analytics. Due to the increasing amount of data generated by hospital information systems, visualization becomes successively more important. Extracting certain trends from such highly diverse data by suitable visual mappings is one of the primary goals of medical visualization. The data is usually acquired by computed tomography, magnetic resonance imaging or ultrasound.\n\nCurrently, our research addresses the analysis of blood vessels such as the inspection of possible stenotic regions or their spatial arrangement as in the Circle of Willis. Furthermore, we investigate aneurysm classification and lesion detection as well as visualization. Another research area deals with realistic prenatal visualization of the fetus in-vivo and in real-time. Due to the high variability of medical imaging data, we further focus on high-level correction of segmentation defects.", "website": "https://www.cg.tuwien.ac.at/research/area/MedVis", "teaser": { "name": "teaser.png", "path": "research_area:MedVis", "type": "image/png", "size": 225330, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/MedVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "amabili2021", "amirkhanov-2018-withteeth", "amirkhanov-2021-diss", "antes-2023-vhv", "arbesser_ba_2023", "Auzinger_Mistelbauer_2013_CSR", "balabanian-2008-hvv", "Balabanian-2010-IIV", "Bauer_David_2018", "bayat-2022-mva", "Bernold_2019", "bernold-2019-epr", "Birkeland-2012-IMC", "borondy2022", "bront-2023-svo", "bruckner-2010-HVC", "burns-2007-fea", "Chen-Information-2016", "djuric-2020-wvo", "Eckelt_2017", "Eichner2022", "EuroVis2018-ShortPapers-Karall", "fmistelbauer-2014-adict", "Ford-2012-HRV", "furmanova_2020", "Gadllah_Hani_2016", "Gall_2017", "gall_alexander_2016BA", "ganglberger2019", "Gietl_2020", "Gillmann2021", "Groeller_2016_P4", "Groeller_V42020", "grossmann_2019_pelvisrunner_poster", "Grossmann_MA", "gutekunst_2019", "Hainoun2019", "Heim-2017", "Ismail-2018", "jank-2022-cbf", "Karall2017CVAB", "Karall2018_2", "karimov-2013-vivisection", "karimov-2015-HD", "karimov-2016-GIVE", "karimov-2016-SD", "Kovacs_PhD", "Machegger2018DTI", "magg-2021-dva", "magg2021", "magg2022", "malan_fluoro", "martorell2022", "Masopust_2018", "Mazza_2020", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_Haichao_2015_VQC", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2017", "mindek-2017-dsn", "Mistelbauer_2021", "Mistelbauer_Gabriel_2016", "mistelbauer-2012-cr", "mistelbauer-2012-ssv", "mistelbauer-2013-cfa", "moerth_eric-2016-3DF", "moerth-2018-tpose", "Musleh_PhD", "musleh-2023-ugi", "Oancea_2018_1", "Oancea_Stefan_2016_VOT", "Oancea2018OAK", "Pahr_PhD", "pahr-2021-vologram", "PERNDORFER-2015-ECS", "Pezenka-2016-MT", "Philipp_Hochhauser_2023", "raidou_2018_bladderrunner", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_bestphd", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_previs2021", "raidou_RO2019", "raidou_shonan167", "raidou_slicedice", "raidou_star2019", "raidou_vcbm14", "raidou_vis14", "raidou_visgap2020", "raidou2018visualflatter", "Reiter2017CVAP", "rraidou_clinical", "rraidou_EG17", "rraidou_phdbook", "ruiz-2008-OVR", "ruiz-2008-SEV", "schindler_2020vis", "Schindler-2022-eurovis", "schindler2020", "Schmidlehner_Sandra_SbC", "Schrempf_2018", "SifuentesGangl2017FIS", "solteszova-2010-MOS", "Solteszova2016", "Spelitz2020", "stritzel2022", "Stritzel2022_thesis", "Tramberger_2018", "Tramberger2017BCS", "unger_2017", "Viola_Ivan_2013_D3D", "Viola_Ivan_2013_HQ3", "Viola_Ivan_DAC", "Viola_Ivan_UVP", "Viola_Ivan_VDP", "vitruvian_2019", "vogel2022", "Weissenboeck_2019_PhD" ], "projects": [ "Smile Analytics" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=MedVis", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [], "files": [ { "description": null, "filetitle": "demo", "main_file": false, "use_in_gallery": false, "access": "public", "name": "raidou2018visualflatter-demo.mp4", "type": "video/mp4", "size": 64003568, "path": "Publication:raidou2018visualflatter", "url": "https://www.cg.tuwien.ac.at/research/publications/2018/raidou2018visualflatter/raidou2018visualflatter-demo.mp4", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2018/raidou2018visualflatter/raidou2018visualflatter-demo:thumb{{size}}.png", "video_mp4": "https://www.cg.tuwien.ac.at/research/publications/2018/raidou2018visualflatter/raidou2018visualflatter-demo:video.mp4" }, { "description": null, "filetitle": "image", "main_file": false, "use_in_gallery": true, "access": 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"https://www.cg.tuwien.ac.at/research/publications/2018/raidou2018visualflatter/raidou2018visualflatter-paper:thumb{{size}}.png" } ], "projects_workgroups": [ { "id": "vis", "drupal_id": 1354, "name": "Visualization Group", "website": "https://www.cg.tuwien.ac.at/group/Visualization-Group", "projects": [ "ADAPT", "AngioVis", "Animated Cell Tab development", "AutARG", "avr", "BioNetIllustration", "COMRADE", "d4328", "d4335", "d4534", "d9275", "d9282", "d9522", "d9555", "deskollage", "diagvis", "exvisation", "Illustrare", "illvisation", "KASI", "ManyViews", "NeuroViewer", "ProcessIllVis", "ProKeyAnim", "PVG", "Scale-VS", "Scenario Pool", "Semantic Steering", "Sim-CT", "Smart-CT", "Smile Analytics", "ViMaL", "VISAR" ], "research_areas": [ "BioVis", "IllVis", "InfoVis", "MedVis", "NetVis", "Perception", "VisMat", "VR" ], "publications": [ "2013_Viola_Ivan_2013_MTS", "2015-image-coll", "2017-kouril-illcell", "2019-ic", "AA2020", "alacruzECR2004", "alacruzVisSym2004", "Alharbi_2021", "Alsallakh_2012_RCW", "alsallakh-2009-iva", "altendorfer-2008-vts", "amabili2021", "amirkhanov_2012", "amirkhanov_2012heur", "amirkhanov-2011", "amirkhanov-2014-ama", "amirkhanov-2018-withteeth", "amirkhanov-2021-diss", "amirkhanov2010AMA", "ammer-2008-lst", "An-2018-CHI", "AndreUrsits_2013_APP", "antes-2023-vhv", "Antonini2020", "arbesser_ba_2023", "Artner-2004-Hig", "Artner-2005-Hig", "Artner-2005-Thesis", "audioflow", "Auzinger_Mistelbauer_2013_CSR", "balabanian-2007-ant", "balabanian-2008-hvv", "Balabanian-2010-IIV", "Balabanian-2010-PSDSV", "Balduz_01", "Basch_2011_ATA", "Bauer_David_2018", "Bauer_Johannes_2014_IWB", "bauer-2015-cbfd", "Bayat_2019", "bayer-2015-gapaot", "bbeer-2013", "Bechtold2020", "Beer_2011_DVE", "Beham_Michael_PSC", "beham-2014-cupid", "bernhard-2006-dvrcta", "bernhard-2014-GTOM", "bernhard-2016-gft", "Bernold_2019", "bernold-2019-epr", "bhore-2021-issac", "birkeland_aasmund_2014_pums", "Birkeland-2012-IMC", "BirsakHanzl-2009", "boeroendy-2022-uio", "boesch_2014_browserHistoryVis", "borgo-2013-gly", "borondy2022", "bouzari-thesis", "Brandorff-08-OV", "brandorff-2009-erv", "brandstaetter_01", "brandstaetter-2007-vosd", "Brandstaetter2020", "breitenecker-2020-bct", "bront-2023-svo", "brucker-2010-RES", "Bruckner_Stefan_2015_VAS", "bruckner-2004-EVV", "bruckner-2005-AIV", "bruckner-2005-ATI", "bruckner-2005-ICV", "bruckner-2005-vid", "bruckner-2005-VIS", "bruckner-2006-EVV", "bruckner-2006-ICE", "bruckner-2007-EDF", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2008-IVV", "bruckner-2009-BVQ", "bruckner-2009-IVV", "bruckner-2010-HVC", "bruckner-2010-IFC", "bruckner-2010-ISM", "bruckner-2010-SES", "Bruckner-2012-VEA", "buerger_raphael_2006_3dpoly", "Buerger-2007-cmv", "Buerger-2007-eurovis", "buerger-2007-star", "bugnar-esk-2021", "burns-2007-fea", "bydlinski-2015-gapaot", "byska-2019-mdfc", "Cai_2018", "Caic2021", "Carata_2011_IVE", "carbesser-2013", "casellato-2016-pkg", "cellVIEW_2015", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "Cornel_Daniel_2015_VOC", "Cornel2016CFM", "coto-2005-MAC", "Cruz-thesis", "Csebfalvi-2002-FPVF", "Csebfalvi-2002-SBICG", "Csebfalvi-2002-Smo", "Csebfalvi-2012-IOM", "Csuk_2011", "daae-lampe-2010-dif", "dataset-christmastree", "dataset-present", "dataset-stagbeetle", "Deutsch-2018", "Dhanoa_2021", "Diehl_2015", "Diehl_2021", "Diehl-2017-Albero", "Dietrich_1", "dietrich-2016-viseq2", "diss-thesis-bratislava", "diss-thesis-magdeburg", "diss-thesis-siegen", "djuric-2020-wvo", "donabauer_2019_1", "donabauer-2015-asc", "draeger-2005-chain", "dworschak-2016-szcm", "dworschak-2016-szcm", "Eckelt_2017", "Eckelt_2018_01", "Edi_2019_10_01", "edlinger-2018-vwr", "eg-tut2005-iv", "Ehlers_PhD", "ehlers-2023-iro", "ehlers-thesis", "Eichner2022", "eiweck-hnv-2021", "emsenhuber-2008-vhd", "eschner-2023-evl", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Essler2022", "EuroVis2018-ShortPapers-Karall", "EuroVis2018-ShortPapers-Reiter", "facial2004", "Fechter_2011_DBS", "filipovic-2014-dect", "FISCHL-2012-CTASEG", "fmistelbauer-2014-ad", "fmistelbauer-2014-adict", "Ford-2012-HRV", "fourousan2021", "freiler-2008-ste", "fritz-2009-ieq", "Froehler_Berhnard_2015_ESM", "froschauer-2009-iod", "Fruehstueck_Anna_2015_DOM", "fuchs_raphael_2007_par", "fuchs_vhml", "fuchs-2008-del", "fuchs-vortex", "furmanova_2020", "gadllah_2016", "Gadllah_Hani_2016", "gall_2016", "Gall_2017", "gall_alexander_2016BA", "Gall2020", "Gall2021", "gangl-2018-gpsart", "Ganglberger-2022-cg", "ganglberger2019", "Ganuza", "Ganuza_2015", "Ganuza_MJ_2015_AVe", "Ganuza_ML_2015_ISA", "Ganuza-2017-IVCSGM", "Gavrilescu_2011_VGP", "gavrilescu-2008-vsc", "gavrilescu-2009-postrend", "Gavrilescu-2010-CIE", "Gehrer_Daniel_CUI", "Gehrer-2017", "Gehrer-2017-molmach", "georgiev-2019-cbg", "gerl-2006-vhi", "geymayer-2017-std", "Gietl_2020", "Gillmann2021", "glanznig-2009-LAMC", "glinzner-2016-tex", "Gogel2020", "gostler-2015-3dp", "grammatikaki-thesis", "grimm-2004-arefined", "GRIMM-2004-FDMX-P", "grimm-2004-memory", "GRIMM-2004-PPC", "grimm-2004-volume", "Groeller_2011_CVC", "Groeller_2011_CW", "Groeller_2011_GBC", "Groeller_2011_HP", "Groeller_2011_HSU", "Groeller_2011_IPV", "Groeller_2011_IVP", "Groeller_2011_NR", "Groeller_2011_NSM", "Groeller_2011_VCD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSS", "Groeller_2012_KAV", "Groeller_2012_VBP", "Groeller_2012_ViV", "Groeller_2012_VV", "Groeller_2014_CaQ", "Groeller_2014_CQV", "Groeller_2014_CV", "Groeller_2014_RWA", "Groeller_2014_STC", "Groeller_2014_UPS", "Groeller_2014_VND", "Groeller_2016_I2", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2016_P7", "Groeller_2021_11", "Groeller_2021_BVM", "Groeller_2021-10", "Groeller_Edi_2013_TVC", "Groeller_Edi_2013_VCQ", "Groeller_Edi_2013TVCK", "Groeller_Edi_VKA", "Groeller_Eduard_2014_THS", "Groeller_Eduard_2014_TSP", "Groeller_Eduard_2014_UCT", "Groeller_Eduard_2015_SMV", "Groeller_Eduard_2015_TCU", "Groeller_V1_2020", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V42020", "Groeller_V5_2020", "groeller-2004-efficient", "groeller-2004-imp", "groeller-2004-sci", "groeller-2005-dia", "Groeller-2010-CVC", "Groeller-2010-IFI", "Groeller-2010-IVVI", "Groeller-2011-HSH", "Groeller-2017-ARTORW", "Groeller-2017-AVC", "Groeller-2017-IVAMCS", "Groeller-2017-PTPMD", "Groller_2021-12-03", "Gronde_2008", "Grorller-2010-IVV", "grossmann_2019_pelvisrunner_poster", "Grossmann_MA", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "grossmann-thesis", "Gruenauer-2011-CAT", "Gschwantner_2011_AMQ", "gundacker-2020-wlm", "Gurbat_2011_SBS", "gusenbauer-2018", "gusenbauer-2018", "gusenbauer-2018-P", "gutekunst_2019", "Hadwiger-2002-Fas", "haidacher_2010_statTF", "haidacher-2004-FVV", "haidacher-2005-MND", "haidacher-2007-idr", "haidacher-2008-vcbm", "haidacher-2011-MSM", "haidacher-2011-phd", "haidacher-2011-VAM", "Hainoun2019", "Halladjian_2020", "hanzl-2011", 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"zechmeister2020", "Zeng_2021", "Zhu-2014-flowvis" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Workgroup&id=vis", "__class": "Workgroup" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2018/raidou2018visualflatter/", "__class": "Publication" }, { "id": "Miao2018FDN", "type_id": "poster", "tu_id": null, "repositum_id": null, "title": "A Preview to Adenita: Visualization and Modeling of DNA Nanostructures", "date": "2018-06-08", "abstract": "We present Adenita, an open-source software that aims to provide an integrated in silico\ndesign toolkit for DNA Nanostructures. It facilitates the modular assembly of pre-existing\nand de novo designs, regardless of the used approach. Adenita is being developed in the\ncontext of the MARA project [1], a highly ambitious project aiming to produce a DNA\nnanorobot capable of targeted cell lyses. Currently, the existing design and visualization\ntools are insufficient to solve the specific challenges in our project. We aim to overcome\nthese limitations with Adenita, a new semi-automated approach that we are developing as\nthe MARA project advances. Adenita integrates visualizations [2] with user interactions and\nalgorithms in a semi-manual approach. At the core, we use a hierarchical data model that\nenables us to combine both a top-down (DAEDALUS [3]) and a bottom-up (caDNAno [4])\ndesign approach of the DNA Nanostructure. From the DNA data model, we create smooth\nvisualizations that depict the structure in multiple scales from its atomic details to a highlevel\ngeometric representation of the target shape. In addition, we employ different layouts\nfor the same structure [5]: 3D structural representations, 2D caDNAno-style diagrams, and\n1D display of the linear sequences. Creators enable the parametrized generation of\nstructural motifs, while Manipulators facilitate the advanced modifications of the structural\nproperties, such as connecting components and adding bridging strands. Analysis of the\ndesigns is still in a preliminary phase, but it already enables the straightforward estimation\nof distances and the melting temperatures [6] of binding regions. The first DNA\nnanostructures that we designed with the new tool are now under experimental evaluation.\n", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "image", "main_file": false, "use_in_gallery": false, "access": "public", "image_width": 857, "image_height": 1242, "name": "Miao2018FDN-image.png", "type": "image/png", "size": 1074408, "path": "Publication:Miao2018FDN", "url": "https://www.cg.tuwien.ac.at/research/publications/2018/Miao2018FDN/Miao2018FDN-image.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2018/Miao2018FDN/Miao2018FDN-image:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1474, "drupal_id": null, "orcid_id": null, "website": null, "firstname": "Elisa", "lastname": "De Llano", "searchname": "Elisa De Llano", "is_teacher": false, "name": "Elisa De Llano", "publications": [ "miao_nantech_2019", "miao_nar_2020", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN" ], "publications_first": [], "project_leader": [], "publication_field": [], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1474", "__class": "Author" }, { "id": 1263, "drupal_id": 863, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/HaichaoMiao", "firstname": "Haichao", "lastname": "Miao", "searchname": "Haichao Miao", "is_teacher": false, "name": "Haichao Miao", "publications": [ "gadllah_2016", "gall_2016", "Halladjian_2020", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_2019", "Miao_Haichao_2015_VQC", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_plitvice_2018", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2017", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Sarkis_2021", "Sbardellati-2019-vcbm", "wu-2019-report", "wu-2021", "wu-2021-vi" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": 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Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. 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This applies to scientists trying to make sense of their experiments and simulations, to bankers and traders trying to understand the dynamics of the financial markets, and to large enterprises which need to understand the principles behind demand and supply—to name just a few examples. The basic problem in all these cases is that people need to identify important and/or unexpected features in large simulated or captured datasets. Visualization is the domain that facilitates this process of sense-making by dramatically simplifying the process of obtaining an understanding of the data—by representing data visually and thus amplifying people’s cognition. This inherent capability of (good) visualization techniques to amplify human cognition, however, is no longer enough to be able to make sense of today’s huge datasets. To be able to see the essential aspects we need dedicated mechanisms that abstract away the (unnecessary) detail to, in turn, allow the user of the visualization to focus on the important elements. The crucial problem in this context is that it is impossible to know what is important and what is not in a general way—importance changes based on the research question, on the application domain, on the data size, on the user, on the specific situation, etc. Visualization technology therefore needs to support dynamic change of visual abstraction of the data to reflect these contextual changes. The fundamental research challenge in visualization for us is to get an understanding of what (visual) abstraction really is, what it means, how it can be controlled, and how it is, can be, and should be used in visualization.\n", "start_date": "2017-01-01", "end_date": "2019-12-31", "leader_id": 171, "logo": { "name": "logo.jpg", "path": "project:Illustrare", "type": "image/jpeg", "size": 95116, "orig_name": "logo.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "fwf", "contract_number": "I 2953-N31", "comment": null } ], "research_areas": [ "BioVis", "IllVis" ], "publications": [ "Halladjian_2020", "kouril-2018-LoL", "lawonn-2018-illvisstar", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Viola-Pondering-2017" ], "url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare", "__class": "Project" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2018/Miao2018FDN/", "__class": "Publication" }, { "id": "wu-2018-metabo", "type_id": "poster", "tu_id": null, "repositum_id": null, "title": "A Visual Comparison of Hand-Drawn and Machine-Generated Human Metabolic Pathways", "date": "2018-06", "abstract": "This poster abstract presents a visual comparison between three hand-drawn and one machine-generated human metabolic pathway diagrams. The human metabolic pathways, which describe significant biochemical reactions in the human body, have been increasingly investigated due to the development of analysis processes and are compiled into pathway diagrams to provide an overview of reaction in the human body. This complex network includes about 5,000 metabolites and 7,500 reactions, which are hierarchically nested and difficult to visualize. We collect and analyze well-known human metabolic pathway diagrams, and summarize the design choices of these diagrams, respectively. Together with a machine-generated diagram, we can understand the visual complexity of three hand-drawn and one machine-generated diagrams.\n", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "image", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 566, "image_height": 800, "name": "wu-2018-metabo-image.png", "type": "image/png", "size": 677575, "path": "Publication:wu-2018-metabo", "url": "https://www.cg.tuwien.ac.at/research/publications/2018/wu-2018-metabo/wu-2018-metabo-image.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2018/wu-2018-metabo/wu-2018-metabo-image:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1464, "drupal_id": 1266, "orcid_id": "0000-0003-1028-0010", "website": "https://www.cg.tuwien.ac.at/staff/Hsiang-YunWu", "firstname": "Hsiang-Yun", "lastname": "Wu", "searchname": "Hsiang-Yun Wu", 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biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "InfoVis", "drupal_id": 4128, "name": "Information Visualization and Visual Analytics", "short_abstract": "In this research area, our focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning. ", "abstract": "Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
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"website": null, "status": "active", "short_abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
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"37", "research_areas": [ { "id": "BioVis", "drupal_id": 4127, "name": "Biological Data Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" }, { "id": "InfoVis", "drupal_id": 4128, "name": "Information Visualization and Visual Analytics", "short_abstract": "In this research area, our focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning. ", "abstract": "Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
\r\n", "website": "https://www.cg.tuwien.ac.at/research/area/InfoVis", "teaser": { "name": "teaser.png", "path": "research_area:InfoVis", "type": "image/png", "size": 60875, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/InfoVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "8564188", "arbesser_ba_2023", "Arleo-2019-vis", "Batik-2021", "batik-2021-gd", "bayat-2022-mva", "beham-2014-cupid", "bhore-2021-issac", "birsak-2014-agtb", "birsak-2017-dpe", "borgo-2013-gly", "borondy2022", "Bruckner_Stefan_2015_VAS", "bugnar-esk-2021", "byska-2019-mdfc", "Cai_2018", "casellato-2016-pkg", "Chen-Information-2016", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "daae-lampe-2010-dif", "Deutsch-2018", "Diehl_2015", "Diehl_2021", "dworschak-2016-szcm", "Eckelt_2018_01", "edlinger-2018-vwr", "eiweck-hnv-2021", "eschner-2023-evl", "Escribano_2017", "fourousan2021", "furmanova_2020", "Gadllah_Hani_2016", "Gall2020", "Ganuza_ML_2015_ISA", "georgiev-2019-cbg", "geyer_lukas_2015_prj", "geymayer-2017-std", "Groeller_2011_CW", "Groeller_2011_NR", "Groeller_2014_RWA", "Groeller_2016_P1", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2021-10", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V5_2020", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "gundacker-2020-wlm", "gusenbauer-2018", "gusenbauer-2018-P", "Heim_2021", "heim-gall-2020-dde", "Heinzl2021", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "karnik-09-shapegrammar", "Kehrer-2010-mom", "kehrer-2012-mod", "kehrer-2013-SBC", "Kehrer-2013-STAR", "klaffenboeck-thesis", "Klein_Tobias_2015TIV", "klein-2016-WCL", "koeppel-2021", "Kolter_2021", "Konyha_2013_IVA", "korpitsch-2021-lov", "Kuroko-2020-iV", "Laschober-2018", "li-2019-gdc", "lippeck-2022-mna", "louis-alexandre_dit_petit-frere-2022-veo", "magg2022", "mahler-2021-mdar", "martorell2022", "maruyama-2019-iv", "Matkovic_Kresimir_2015_", "Matkovic-2014-ieee", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "medeiros-2023-gwf", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_Haichao_2015_VQC", "miao2018Dimsum", "mizuno-2019-eurovis", "Muehlbacher_diss_2018", "musleh_maath_2021_mam", "musleh_maath-2021-mam1", "musleh_maath-2021-mam2", "musleh-2022-mam5", "Neubauer2020", "Nowak_2021", "ortner-2016-tunnel", "ortner-2016-visaware", "PH-2011-LDS", "Pilizar_-2020-bachelor", "pirch_2021_VRN", "pointner_simon-2020", "polatsek-2018-stv", "Presch_2020", "Priselac2021", "Purchase-2020-gd", "Purgathofer-2017-China1", "Purgathofer-2017-China2", "Purgathofer-2017-VC-Interface", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_bestphd", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2019_prsps", "Ribicic_2012_VAS", "Rippberger_2019", "sakr_sherif-2020-cacm", "samoul-2019-cnp", "sbardellati-2021-eveos", "schmidt-phd", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sikachev_peter-2011-protovis", "smiech-2018-tei", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger-2013-neuromap", "sorger-2015-litevis", "sorger-2015-taxintec", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "spegel-gruenberger-2020", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "steinschorn-2020-parameter", "stoff-concepMap-2021", "stritzel2022", "Strohmayer-2018-BT", "takahashi-2019-acdt", "Thomas-2018", "TR1862162", "Troidl_2019", "turner-aso", "unger-2019_vcp", "vad_viktor-2017-WVE", "vaico", "Vasileva-2018", "vasileva-2019-smw", "Wagner_032017", "wagner-2024-par", "waldin-2019-ccm", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "webGPU_aggregateVis-2023", "wolf-2023-cc", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-eurovis-star", "wu-2020-tvcg", "ymca", "YOGHOURDJIAN2019" ], "projects": [ "BioNetIllustration", "d9282", "d9522", "deskollage", "Scenario Pool" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=InfoVis", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [], "files": [ { "description": null, "filetitle": "Image", "main_file": false, "use_in_gallery": false, "access": "public", "image_width": 3302, "image_height": 1884, "name": "miao2018Dimsum-Image.png", "type": "image/png", "size": 2858278, "path": "Publication:miao2018Dimsum", "url": "https://www.cg.tuwien.ac.at/research/publications/2018/miao2018Dimsum/miao2018Dimsum-Image.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2018/miao2018Dimsum/miao2018Dimsum-Image:thumb{{size}}.png" }, { "description": null, "filetitle": "Paper", "main_file": true, "use_in_gallery": true, "access": "public", "preview_image_width": 3302, "preview_image_height": 1884, "name": "miao2018Dimsum-Paper.pdf", "type": "application/pdf", "size": 50814642, "path": "Publication:miao2018Dimsum", "preview_name": "miao2018Dimsum-Paper:preview.png", "preview_type": "image/png", "preview_size": 2858278, "url": "https://www.cg.tuwien.ac.at/research/publications/2018/miao2018Dimsum/miao2018Dimsum-Paper.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2018/miao2018Dimsum/miao2018Dimsum-Paper:thumb{{size}}.png" }, { "description": null, "filetitle": "Recording", "main_file": false, "use_in_gallery": false, "access": "public", "name": "miao2018Dimsum-Recording.mp4", "type": "video/mp4", "size": 236260449, "path": "Publication:miao2018Dimsum", "url": "https://www.cg.tuwien.ac.at/research/publications/2018/miao2018Dimsum/miao2018Dimsum-Recording.mp4", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2018/miao2018Dimsum/miao2018Dimsum-Recording:thumb{{size}}.png", "video_mp4": "https://www.cg.tuwien.ac.at/research/publications/2018/miao2018Dimsum/miao2018Dimsum-Recording:video.mp4" }, { "description": null, "filetitle": "Video", "main_file": false, "use_in_gallery": false, "access": "public", "preview_image_width": 3302, "preview_image_height": 1884, "name": "miao2018Dimsum-Video.mp4", "type": "video/mp4", "size": 97832153, "path": "Publication:miao2018Dimsum", "preview_name": "miao2018Dimsum-Video:preview.png", "preview_type": "image/png", "preview_size": 2858278, "url": "https://www.cg.tuwien.ac.at/research/publications/2018/miao2018Dimsum/miao2018Dimsum-Video.mp4", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2018/miao2018Dimsum/miao2018Dimsum-Video:thumb{{size}}.png", "video_mp4": "https://www.cg.tuwien.ac.at/research/publications/2018/miao2018Dimsum/miao2018Dimsum-Video:video.mp4" } ], "projects_workgroups": [ { "id": "Illustrare", "workgroup_id": "vis", "drupal_id": 4189, "name": "ILLUSTRARE: Integrative Visual Abstraction of Molecular Data", "name_de": null, "website": null, "status": "active", "short_abstract": "FWF - I 2953-N31\nIntegrative Visual Abstraction of Molecular Data", "abstract": "In many aspects of our modern lives we face the problem of having to make sense of large amounts of data. This applies to scientists trying to make sense of their experiments and simulations, to bankers and traders trying to understand the dynamics of the financial markets, and to large enterprises which need to understand the principles behind demand and supply—to name just a few examples. The basic problem in all these cases is that people need to identify important and/or unexpected features in large simulated or captured datasets. Visualization is the domain that facilitates this process of sense-making by dramatically simplifying the process of obtaining an understanding of the data—by representing data visually and thus amplifying people’s cognition. This inherent capability of (good) visualization techniques to amplify human cognition, however, is no longer enough to be able to make sense of today’s huge datasets. To be able to see the essential aspects we need dedicated mechanisms that abstract away the (unnecessary) detail to, in turn, allow the user of the visualization to focus on the important elements. The crucial problem in this context is that it is impossible to know what is important and what is not in a general way—importance changes based on the research question, on the application domain, on the data size, on the user, on the specific situation, etc. Visualization technology therefore needs to support dynamic change of visual abstraction of the data to reflect these contextual changes. The fundamental research challenge in visualization for us is to get an understanding of what (visual) abstraction really is, what it means, how it can be controlled, and how it is, can be, and should be used in visualization.\n", "start_date": "2017-01-01", "end_date": "2019-12-31", "leader_id": 171, "logo": { "name": "logo.jpg", "path": "project:Illustrare", "type": "image/jpeg", "size": 95116, "orig_name": "logo.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "fwf", "contract_number": "I 2953-N31", "comment": null } ], "research_areas": [ "BioVis", "IllVis" ], "publications": [ "Halladjian_2020", "kouril-2018-LoL", "lawonn-2018-illvisstar", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Viola-Pondering-2017" ], "url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare", "__class": "Project" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2018/miao2018Dimsum/", "__class": "Publication" }, { "id": "Furmanova_2018", "type_id": "journalpaper_notalk", "tu_id": null, "repositum_id": null, "title": "COZOID: contact zone identifier for visual analysis of protein-protein interactions", "date": "2018-04", "abstract": "Background: Studying the patterns of protein-protein interactions (PPIs) is fundamental for understanding thestructure and function of protein complexes. The exploration of the vast space of possible mutual configurations ofinteracting proteins and their contact zones is very time consuming and requires the proteomic expert knowledge.Results:In this paper, we propose a novel tool containing a set of visual abstraction techniques for the guidedexploration of PPI configuration space. It helps proteomic experts to select the most relevant configurations andexplore their contact zones at different levels of detail. The system integrates a set of methods that follow and supportthe workflow of proteomics experts. The first visual abstraction method, the Matrix view, is based on customizedinteractive heat maps and provides the users with an overview of all possible residue-residue contacts in all PPIconfigurations and their interactive filtering. In this step, the user can traverse all input PPI configurations and obtain anoverview of their interacting amino acids. Then, the models containing a particular pair of interacting amino acids canbe selectively picked and traversed. Detailed information on the individual amino acids in the contact zones and theirproperties is presented in the Contact-Zone list-view. The list-view provides a comparative tool to rank the best modelsbased on the similarity of their contacts to the template-structure contacts. All these techniques are interactivelylinked with other proposed methods, the Exploded view and the Open-Book view, which represent individualconfigurations in three-dimensional space. These representations solve the high overlap problem associated withmany configurations. Using these views, the structural alignment of the best models can also be visually confirmed.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "image", "main_file": true, "use_in_gallery": true, "access": "public", "image_width": 223, "image_height": 172, "name": "Furmanova_2018-image.JPG", "type": "image/jpeg", "size": 15338, "path": "Publication:Furmanova_2018", "url": "https://www.cg.tuwien.ac.at/research/publications/2018/Furmanova_2018/Furmanova_2018-image.JPG", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2018/Furmanova_2018/Furmanova_2018-image:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1733, "drupal_id": null, "orcid_id": null, "website": null, "firstname": "Katarína ", "lastname": "Furmanová", "searchname": "Katarína Furmanová", "is_teacher": false, "name": "Katarína Furmanová", "publications": [ "boeroendy-2022-uio", 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"mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "Mazza_2020", "Mazza_2021_05", "Melo_2018_11", "Meusburger_2020", "Miao_2015_VCBM", "Miao_2019", "Miao_Haichao_2015_VQC", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_plitvice_2018", "miao_thesis_2019", "miao_tvcg_2017", "miao_tvcg_2018", "miao_tvcg_2018", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Michl_2017_CSV", "mindek_peter-2012-visgroupproj", "mindek_peter-2014-cs_kaust", "mindek-2013-cs_cvut", "mindek-2013-csl", "mindek-2013-pel", "mindek-2014-mcs", "mindek-2014-vivi_cvut", "mindek-2015-mc", "mindek-2015-mctalk", "mindek-2016-utah-talk", "mindek-2017-dsn", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-thesis", "mistelbauer_2013_SIV", "Mistelbauer_2021", "Mistelbauer_Gabriel_2015_NHR", "Mistelbauer_Gabriel_2016", "mistelbauer-2010-pvv", "mistelbauer-2012-cr", "mistelbauer-2012-ssv", "mistelbauer-2013-cfa", "mistelbauer-2015-abvv", "Mitterhofer_2017", "mizuno-2019-eurovis", "Mlejnek_2004_PF", "Mlejnek_2005_AOEPF", "Mlejnek_2006_MVOA", "Mlejnek-2004-Int", "Mlejnek-2004-ITVAC", "Mlinaric-2015-MT", "Moellinger_Christian_IDE2", "moerth_eric-2016-3DF", "moerth-2018-tpose", "monitzer_2008_FluSi", "Morar_2012_ISB", "Muehlbacher_diss_2018", "mueller-2009-ivs", "Muigg_2011_ISI", "Muigg_2011_VC", "Muigg-2008-four", "muigg-2012-svr", "Musleh_PhD", "Neumann-2002-Fea", "nguyen_2020-covid", "Niedermayer_2018", "Novotny_2013_ASVD", "Nowak_2020", "Nowak_2021", "Oancea_2018_1", "Oancea_Stefan_2016_VOT", "Oancea2018OAK", "oeltze-2013-tut", "opitz-2009-cvv", "Ortner_PhD", "Ortner2020", "Pahr_PhD", "pahr-2021-vologram", "pahr-thesis", "Pahr2020", "Pajer_2012_VoM", "Panayotov", "Parzer_2013_IIG", "patel_2009_MC", "patel_daniel_2007_IRSD", "patel-2008-tsa", "patel-2009-evr", "patel-2011-PEA", "Pauschenwein_2022", "Peter_2012_AIV", "Pezenka-2016-MT", "Pfahler_David_2015_IPI", "Pfahler-2016-MT", "PH-2011-LDS", 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"RAUTEK06", "Rautek06Vis", "Rautek06VMLS", "rautek2010", "Red_Andreas_2015_FFT", "Reh_Andreas_VoP", "reh-2013", "reina-2020-mtv", "Reisacher_Matthias_CPW", "Reisacher2016", "Reiter_2009_IXIA", "Reiter2017CVAP", "Rezk06Vis", "Ribicic_2012_SUS", "Ribicic_2012_VAS", "Ribicic-2010-CRS", "Riegelnegg_2019", "rinortner_susanne-2019-vpicc", "rinortner_susanne-2019-vpicc", "Rippberger_2019", "rippl-2023-atg", "ritzberger-2010-nar", "Ropinski-2012-UBT", "rraidou_clinical", "rraidou_EG17", "rraidou_phdbook", "rsabin-2013", "ruiz-2008-OVR", "ruiz-2008-SEV", "samoul-2019-cnp", "Sanjin_Rados_RV", "Sarkis_2021", "Sbardellati-2019-vcbm", "Sbardellati-2019-vcbm", "sbardellati-2021-eveos", "scharsach-2005-adv", "Schernthaner-2017-MCP", "schindler_2020vis", "Schindler-2022-eurovis", "schindler2020", "schleicher-2011-VLSC", "Schmidlehner_Sandra_SbC", "schmidlehner2021", "schmidt-2011-mt", "schmidt-phd", "schmidt-phd", "schoellhuber-2008-asc", "scholz_2021", "Schrempf_2018", "Schrempf_2020", 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"Staudacher_2022", "staudacher_florian-2016-topo3d", "stehno-2011-RVD", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "StickmanMax-shoetta-kampfer", "stoff-concepMap-2021", "StrakaVis2004", "stritzel2022", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "suntinger-2008-etet", "suntinger-2008-tet", "Swoboda_Nicolas_VIT", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "termeer-2006-000", "termeer-2007-covicad", "termeer-2008-scmr", "termeer-2008-vis", "termeer-2009-cvc", "termeer-2009-scmr", "textures-3d-printing", "thesis-tekaya", "Thomas-2018", "Thurner-2005-IVR", "toth-2007-ndd", "TR-186-2-05-01", "TR-186-2-05-02", "TR-186-2-05-03", "TR-186-2-05-04", "TR-186-2-05-06", "TR-186-2-05-07", "TR-186-2-05-08", "TR-186-2-06-01", "TR-186-2-06-02", "TR-186-2-06-03", "TR-186-2-06-04", "TR-186-2-07-02", "TR-186-2-07-03", "TR-186-2-07-04", "TR-186-2-07-05", "TR-186-2-07-06", "TR-186-2-07-07", "TR-186-2-07-08", "TR-186-2-07-10", "TR-186-2-07-11", "TR-186-2-07-12", "TR-186-2-08-01", "TR-186-2-08-02", "TR-186-2-08-03", "TR-186-2-08-04", "TR-186-2-08-05", "TR-186-2-08-06", "TR-186-2-08-07", "TR-186-2-08-08", "TR-186-2-08-10", "TR-186-2-08-11", "TR-186-2-08-12", "TR-186-2-08-14", "TR-186-2-09-01", "TR-186-2-15-03", "TR1862162", "Tramberger_2018", "Tramberger2017BCS", "Trautner_Thomas_2014_VAE", "trautner-2018-imd", "trautner-2018-imd", "travnicek-2017-thm", "Trenkwalder-2004-MAR", "Troidl_2019", "Troidl_2021", "Troidl_2022", "turner-aso", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "tweebo-2014", "ulschmid-2024-reo", "unger_2017", "unger-2019_vcp", "Unger2020", "vad_2015_phd", "Vad_Viktor_2015_RVV", "vad-2016-bre", "vaico", "varchola_andrej-2012-fetoscopic", "Vasileva_2022", "Vasileva-2018", "vessel2003", "Viola_2013_IDV", "Viola_Ivan_2013_CAI", "Viola_Ivan_2013_D3D", "Viola_Ivan_2013_DC", "Viola_Ivan_2013_GS", "Viola_Ivan_2013_HQ3", "Viola_Ivan_2013_RMA", "Viola_Ivan_2013_RSb", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_DAC", "Viola_Ivan_IIP", "Viola_Ivan_UVP", "Viola_Ivan_VDP", "Viola-05-Smart", "Viola-2003-GPU", "Viola-2003-Har", "viola-2003-hbn", "Viola-2003-NON", "viola-2004-gbf", "Viola-2004-GPU", "viola-2004-har", "viola-2004-har2", "viola-2004-idv", "viola-2004-imp", "Viola-2004-ImpX", "Viola-2004-ImpX2", "viola-2005-imp", "viola-2006-FoA", "viola-evr", "Viola-Pondering-2017", "viola-popular-article-2006", "Viola-vistutillustrativevis", "vis-foa", "VisWeek-Tutorial-2012-Uncertainty", "vitruvian_2019", "voglreiter-2023-tro", "Vucenovic_2022", "vucini_2006", "vucini_2008_rnp", "vucini_2009", "vucini_erald-2007-FRI", "vucini-2009-phd", "vucini-2011", "Wagner_032017", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2017_FlickerObserver", "Waldin_Nicholas_2017_FlickerObserver", "Waldin_Nicholas_2017_FlickerObserver", "waldin-2017-thesis", "waldin-2019-ccm", "waldin-2019-ccm", "Waldner_2017_11", "Waldner_2017_11", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-af", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2018-ved", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "Waser-2010-WL", "webGPU_aggregateVis-2023", "weiner_2011", "Weissenboeck_2019", "Weissenboeck_2019_PhD", "weissenboeck-2014", "Wihann_2017", "wolf-2023-cc", "Woschizka_2021", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg", "wu-2021", "wu-2021-vi", "xmastree2002", "xmastree2005", "ymca", "YOGHOURDJIAN2019", "Zambal-2003-SWA", "zambal-2005-3dact", "Zaufel_2021", "zauner-2013-svkinect", "zechmeister2020", "Zeng_2021", "Zhu-2014-flowvis" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Workgroup&id=vis", "__class": "Workgroup" }, { "id": "Illustrare", "workgroup_id": "vis", "drupal_id": 4189, "name": "ILLUSTRARE: Integrative Visual Abstraction of Molecular Data", "name_de": null, "website": null, "status": "active", "short_abstract": "FWF - I 2953-N31\nIntegrative Visual Abstraction of Molecular Data", "abstract": "In many aspects of our modern lives we face the problem of having to make sense of large amounts of data. This applies to scientists trying to make sense of their experiments and simulations, to bankers and traders trying to understand the dynamics of the financial markets, and to large enterprises which need to understand the principles behind demand and supply—to name just a few examples. The basic problem in all these cases is that people need to identify important and/or unexpected features in large simulated or captured datasets. Visualization is the domain that facilitates this process of sense-making by dramatically simplifying the process of obtaining an understanding of the data—by representing data visually and thus amplifying people’s cognition. This inherent capability of (good) visualization techniques to amplify human cognition, however, is no longer enough to be able to make sense of today’s huge datasets. To be able to see the essential aspects we need dedicated mechanisms that abstract away the (unnecessary) detail to, in turn, allow the user of the visualization to focus on the important elements. The crucial problem in this context is that it is impossible to know what is important and what is not in a general way—importance changes based on the research question, on the application domain, on the data size, on the user, on the specific situation, etc. Visualization technology therefore needs to support dynamic change of visual abstraction of the data to reflect these contextual changes. The fundamental research challenge in visualization for us is to get an understanding of what (visual) abstraction really is, what it means, how it can be controlled, and how it is, can be, and should be used in visualization.\n", "start_date": "2017-01-01", "end_date": "2019-12-31", "leader_id": 171, "logo": { "name": "logo.jpg", "path": "project:Illustrare", "type": "image/jpeg", "size": 95116, "orig_name": "logo.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "fwf", "contract_number": "I 2953-N31", "comment": null } ], "research_areas": [ "BioVis", "IllVis" ], "publications": [ "Halladjian_2020", "kouril-2018-LoL", "lawonn-2018-illvisstar", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Viola-Pondering-2017" ], "url": "https://www.cg.tuwien.ac.at/research/projects/Illustrare", "__class": "Project" }, { "id": "illvisation", "workgroup_id": "vis", "drupal_id": 4171, "name": "Visual Computing: Illustrative Visualization", "name_de": null, "website": null, "status": "active", "short_abstract": "The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
\r\n", "website": "https://www.cg.tuwien.ac.at/research/area/InfoVis", "teaser": { "name": "teaser.png", "path": "research_area:InfoVis", "type": "image/png", "size": 60875, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/InfoVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "8564188", "arbesser_ba_2023", "Arleo-2019-vis", "Batik-2021", "batik-2021-gd", "bayat-2022-mva", "beham-2014-cupid", "bhore-2021-issac", "birsak-2014-agtb", "birsak-2017-dpe", "borgo-2013-gly", "borondy2022", "Bruckner_Stefan_2015_VAS", "bugnar-esk-2021", "byska-2019-mdfc", "Cai_2018", "casellato-2016-pkg", "Chen-Information-2016", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "daae-lampe-2010-dif", "Deutsch-2018", "Diehl_2015", "Diehl_2021", "dworschak-2016-szcm", "Eckelt_2018_01", "edlinger-2018-vwr", "eiweck-hnv-2021", "eschner-2023-evl", "Escribano_2017", "fourousan2021", "furmanova_2020", "Gadllah_Hani_2016", "Gall2020", "Ganuza_ML_2015_ISA", "georgiev-2019-cbg", "geyer_lukas_2015_prj", "geymayer-2017-std", "Groeller_2011_CW", "Groeller_2011_NR", "Groeller_2014_RWA", "Groeller_2016_P1", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2021-10", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V5_2020", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "gundacker-2020-wlm", "gusenbauer-2018", "gusenbauer-2018-P", "Heim_2021", "heim-gall-2020-dde", "Heinzl2021", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "karnik-09-shapegrammar", "Kehrer-2010-mom", "kehrer-2012-mod", "kehrer-2013-SBC", "Kehrer-2013-STAR", "klaffenboeck-thesis", "Klein_Tobias_2015TIV", "klein-2016-WCL", "koeppel-2021", "Kolter_2021", "Konyha_2013_IVA", "korpitsch-2021-lov", "Kuroko-2020-iV", "Laschober-2018", "li-2019-gdc", "lippeck-2022-mna", "louis-alexandre_dit_petit-frere-2022-veo", "magg2022", "mahler-2021-mdar", "martorell2022", "maruyama-2019-iv", "Matkovic_Kresimir_2015_", "Matkovic-2014-ieee", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "medeiros-2023-gwf", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_Haichao_2015_VQC", "miao2018Dimsum", "mizuno-2019-eurovis", "Muehlbacher_diss_2018", "musleh_maath_2021_mam", "musleh_maath-2021-mam1", "musleh_maath-2021-mam2", "musleh-2022-mam5", "Neubauer2020", "Nowak_2021", "ortner-2016-tunnel", "ortner-2016-visaware", "PH-2011-LDS", "Pilizar_-2020-bachelor", "pirch_2021_VRN", "pointner_simon-2020", "polatsek-2018-stv", "Presch_2020", "Priselac2021", "Purchase-2020-gd", "Purgathofer-2017-China1", "Purgathofer-2017-China2", "Purgathofer-2017-VC-Interface", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_bestphd", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2019_prsps", "Ribicic_2012_VAS", "Rippberger_2019", "sakr_sherif-2020-cacm", "samoul-2019-cnp", "sbardellati-2021-eveos", "schmidt-phd", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sikachev_peter-2011-protovis", "smiech-2018-tei", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger-2013-neuromap", "sorger-2015-litevis", "sorger-2015-taxintec", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "spegel-gruenberger-2020", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "steinschorn-2020-parameter", "stoff-concepMap-2021", "stritzel2022", "Strohmayer-2018-BT", "takahashi-2019-acdt", "Thomas-2018", "TR1862162", "Troidl_2019", "turner-aso", "unger-2019_vcp", "vad_viktor-2017-WVE", "vaico", "Vasileva-2018", "vasileva-2019-smw", "Wagner_032017", "wagner-2024-par", "waldin-2019-ccm", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "webGPU_aggregateVis-2023", "wolf-2023-cc", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-eurovis-star", "wu-2020-tvcg", "ymca", "YOGHOURDJIAN2019" ], "projects": [ "BioNetIllustration", "d9282", "d9522", "deskollage", "Scenario Pool" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=InfoVis", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [ { "href": "https://doi.org/10.4230/DagRep.7.8.1", "caption": "Dagstuhl Seminar 17332", "description": null, "main_file": 0 } ], "files": [ { "description": null, "filetitle": "paper", "main_file": true, "use_in_gallery": false, "access": "public", "name": "wu-2017-dagstuhl-paper.pdf", "type": "application/pdf", "size": 3647552, "path": "Publication:wu-2017-dagstuhl", "url": "https://www.cg.tuwien.ac.at/research/publications/2018/wu-2017-dagstuhl/wu-2017-dagstuhl-paper.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2018/wu-2017-dagstuhl/wu-2017-dagstuhl-paper:thumb{{size}}.png" } ], "projects_workgroups": [ { "id": "BioNetIllustration", "workgroup_id": "vis", "drupal_id": 4196, "name": "BioNetIllustration: User Centric Illustrations of Biological Networks", "name_de": null, "website": null, "status": "active", "short_abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "abstract": "In living systems, one molecule is commonly involved in several distinct physiological functions. The roles of molecules are commonly summarized in pathway diagrams, which, however, are abstract, hierarchically nested and thus is difficult to comprehend especially by non-expert audience. The primary goal of this research in visualization is to intuitively support the comprehensive understanding of relationships among biological networks using interactively computed illustrations. Illustrations, especially in textbooks of biology are carefully designed to clearly present reactions between organs as well as interactions within cells. Automatic generation of illustrative visualizations of biological networks is thus the technical content of this proposal. Automatic generation of hand-drawn illustrations has been a challenging task due to the difficulty of algorithmically describing a human creative process such as evaluating and selecting significant information and composing meaningful explanations in a visually plausible manner. The project also involves experts from several disciplines including network and medical visualization, data mining, systems biology as well as perceptual psychology. The result will provide a new direction for physiological process analysis and accelerate the knowledge transfer not only within experts but also to the public. Acknowledgment: The project has received funding from the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 747985.
\r\n", "start_date": "2017-06-21", "end_date": "2019-06-20", "leader_id": 1464, "logo": { "name": "logo.png", "path": "project:BioNetIllustration", "type": "image/png", "size": 16337, "orig_name": "logo.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/BioNetIllustration/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "Horizon 2020", "contract_number": "747985", "comment": null } ], "research_areas": [ "BioVis", "InfoVis" ], "publications": [ "cmolik-2020-tvcg", "kouril-2018-LoL", "mizuno-2019-eurovis", "Purchase-2020-gd", "rinortner_susanne-2019-vpicc", "Sbardellati-2019-vcbm", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg", "YOGHOURDJIAN2019" ], "url": "https://www.cg.tuwien.ac.at/research/projects/BioNetIllustration", "__class": "Project" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2018/wu-2017-dagstuhl/", "__class": "Publication" }, { "id": "sorger-2017-thesis", "type_id": "phdthesis", "tu_id": null, "repositum_id": null, "title": "Integration Strategies in the Visualization of Multifaceted Spatial Data", "date": "2017-09-26", "abstract": "Visualization designers have several visual channels at their disposal for encoding data into visual representations, e.g., position, size, shape, orientation, color, texture, brightness, as well as motion. The mapping of attributes to visual channels can be chosen by the designer. In theory, any data attribute can be represented by any of these visual channels or by a combination of multiple of these channels. In practice, the optimal mapping and the most suitable type of visualization strongly depend on the data as well as on the user's task. In the visualization of spatial data, the mapping of spatial attributes to visual channels is inherently given by the data. Multifaceted spatial data possesses a wide range of additional (non-spatial) attributes without a given mapping. The data's given spatial context is often important for successfully fulfilling a task. The design space in spatial data visualization can therefore be heavily constrained when trying to choose an optimal mapping for other attributes within the spatial context. To solve an exploration or presentation task in the domain of multifaceted spatial data, special strategies have to be employed in order to integrate the essential information from the various data facets in an appropriate representation form with the spatial context.\nThis thesis explores visualization integration strategies for multifaceted spatial data. The first part of this thesis describes the design space of integration in terms of two aspects: visual and functional integration. Visual integration describes how representations of the different data facets can be visually composed within a spatial context. Functional integration, describes how events that have been triggered, for instance, through user interaction, can be coordinated across the various visually integrated representations.\nThe second part of this thesis describes contributions to the field of visualization in the context of concrete integration applications for exploration and presentation scenarios. The first scenario addresses a set of challenges in the exploratory analysis of multifaceted spatial data in the scope of a decision making scenario in lighting design. The user's task is to find an optimal lighting solution among dozens or even hundreds of potential candidates. In the scope of a design study, the challenges in lighting design are addressed with LiteVis, a system that integrates representations of the simulation parameter space with representations of all relevant aspects of the simulation output. The integration of these heterogeneous aspects together with a novel ranking visualization are thereby the key to enabling an efficient exploration and comparison of lighting parametrizations.\nIn presentation scenarios, the generation of insights often cannot rely on user interaction and therefore needs a different approach. The challenge is to generate visually appealing, yet information-rich representations for mainly passive observation. In this context, this thesis addresses two different challenges in the domain of molecular visualization. The first challenge concerns the conveying of relations between two different representations of a molecular data set, such as a virus. The relation is established via animated transitions - a temporal form of integration between two representations. The proposed solution features a novel technique for creating such transitions that are re-usable for different data sets, and can be combined in a modular fashion. \nAnother challenge in presentation scenarios of multifaceted spatial data concerns the presentation of the transition between development states of molecular models, where the actual biochemical process of the transition is not exactly known or it is too complex to represent. A novel technique applies a continuous abstraction of both model representations to a level of detail at which the relationship between them can be accurately conveyed, in order to overcome a potential indication of false relationship information. Integration thereby brings the different abstraction levels and the different model states into relation with each other. The results of this thesis clearly demonstrate that integration is a versatile tool in overcoming key challenges in the visualization of multifaceted spatial data.\n", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "overview", "main_file": false, "use_in_gallery": false, "access": "public", "image_width": 1768, "image_height": 1186, "name": "sorger-2017-thesis-overview.png", "type": "image/png", "size": 836988, "path": "Publication:sorger-2017-thesis", "url": "https://www.cg.tuwien.ac.at/research/publications/2017/sorger-2017-thesis/sorger-2017-thesis-overview.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2017/sorger-2017-thesis/sorger-2017-thesis-overview:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1072, "drupal_id": 1056, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/JohannesSorger", "firstname": "Johannes", 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Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" }, { "id": "InfoVis", "drupal_id": 4128, "name": "Information Visualization and Visual Analytics", "short_abstract": "In this research area, our focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning. ", "abstract": "Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
\r\n", "website": "https://www.cg.tuwien.ac.at/research/area/InfoVis", "teaser": { "name": "teaser.png", "path": "research_area:InfoVis", "type": "image/png", "size": 60875, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/InfoVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "8564188", "arbesser_ba_2023", "Arleo-2019-vis", "Batik-2021", "batik-2021-gd", "bayat-2022-mva", "beham-2014-cupid", "bhore-2021-issac", "birsak-2014-agtb", "birsak-2017-dpe", "borgo-2013-gly", "borondy2022", "Bruckner_Stefan_2015_VAS", "bugnar-esk-2021", "byska-2019-mdfc", "Cai_2018", "casellato-2016-pkg", "Chen-Information-2016", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "daae-lampe-2010-dif", "Deutsch-2018", "Diehl_2015", "Diehl_2021", "dworschak-2016-szcm", "Eckelt_2018_01", "edlinger-2018-vwr", "eiweck-hnv-2021", "eschner-2023-evl", "Escribano_2017", "fourousan2021", "furmanova_2020", "Gadllah_Hani_2016", "Gall2020", "Ganuza_ML_2015_ISA", "georgiev-2019-cbg", "geyer_lukas_2015_prj", "geymayer-2017-std", "Groeller_2011_CW", "Groeller_2011_NR", "Groeller_2014_RWA", "Groeller_2016_P1", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2021-10", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V5_2020", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "gundacker-2020-wlm", "gusenbauer-2018", "gusenbauer-2018-P", "Heim_2021", "heim-gall-2020-dde", "Heinzl2021", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "karnik-09-shapegrammar", "Kehrer-2010-mom", "kehrer-2012-mod", "kehrer-2013-SBC", "Kehrer-2013-STAR", "klaffenboeck-thesis", "Klein_Tobias_2015TIV", "klein-2016-WCL", "koeppel-2021", "Kolter_2021", "Konyha_2013_IVA", "korpitsch-2021-lov", "Kuroko-2020-iV", "Laschober-2018", "li-2019-gdc", "lippeck-2022-mna", "louis-alexandre_dit_petit-frere-2022-veo", "magg2022", "mahler-2021-mdar", "martorell2022", "maruyama-2019-iv", "Matkovic_Kresimir_2015_", "Matkovic-2014-ieee", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "medeiros-2023-gwf", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_Haichao_2015_VQC", "miao2018Dimsum", "mizuno-2019-eurovis", "Muehlbacher_diss_2018", "musleh_maath_2021_mam", "musleh_maath-2021-mam1", "musleh_maath-2021-mam2", "musleh-2022-mam5", "Neubauer2020", "Nowak_2021", "ortner-2016-tunnel", "ortner-2016-visaware", "PH-2011-LDS", "Pilizar_-2020-bachelor", "pirch_2021_VRN", "pointner_simon-2020", "polatsek-2018-stv", "Presch_2020", "Priselac2021", "Purchase-2020-gd", "Purgathofer-2017-China1", "Purgathofer-2017-China2", "Purgathofer-2017-VC-Interface", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_bestphd", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2019_prsps", "Ribicic_2012_VAS", "Rippberger_2019", "sakr_sherif-2020-cacm", "samoul-2019-cnp", "sbardellati-2021-eveos", "schmidt-phd", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sikachev_peter-2011-protovis", "smiech-2018-tei", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger-2013-neuromap", "sorger-2015-litevis", "sorger-2015-taxintec", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "spegel-gruenberger-2020", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "steinschorn-2020-parameter", "stoff-concepMap-2021", "stritzel2022", "Strohmayer-2018-BT", "takahashi-2019-acdt", "Thomas-2018", "TR1862162", "Troidl_2019", "turner-aso", "unger-2019_vcp", "vad_viktor-2017-WVE", "vaico", "Vasileva-2018", "vasileva-2019-smw", "Wagner_032017", "wagner-2024-par", "waldin-2019-ccm", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "webGPU_aggregateVis-2023", "wolf-2023-cc", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-eurovis-star", "wu-2020-tvcg", "ymca", "YOGHOURDJIAN2019" ], "projects": [ "BioNetIllustration", "d9282", "d9522", "deskollage", "Scenario Pool" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=InfoVis", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [], "files": [ { "description": null, "filetitle": "overview", "main_file": false, "use_in_gallery": false, "access": "public", "image_width": 1768, "image_height": 1186, "name": "sorger-2017-thesis-overview.png", "type": "image/png", "size": 836988, "path": "Publication:sorger-2017-thesis", "url": 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"projects": [ "ADAPT", "AngioVis", "Animated Cell Tab development", "AutARG", "avr", "BioNetIllustration", "COMRADE", "d4328", "d4335", "d4534", "d9275", "d9282", "d9522", "d9555", "deskollage", "diagvis", "exvisation", "Illustrare", "illvisation", "KASI", "ManyViews", "NeuroViewer", "ProcessIllVis", "ProKeyAnim", "PVG", "Scale-VS", "Scenario Pool", "Semantic Steering", "Sim-CT", "Smart-CT", "Smile Analytics", "ViMaL", "VISAR" ], "research_areas": [ "BioVis", "IllVis", "InfoVis", "MedVis", "NetVis", "Perception", "VisMat", "VR" ], "publications": [ "2013_Viola_Ivan_2013_MTS", "2015-image-coll", "2017-kouril-illcell", "2019-ic", "AA2020", "alacruzECR2004", "alacruzVisSym2004", "Alharbi_2021", "Alsallakh_2012_RCW", "alsallakh-2009-iva", "altendorfer-2008-vts", "amabili2021", "amirkhanov_2012", "amirkhanov_2012heur", "amirkhanov-2011", "amirkhanov-2014-ama", "amirkhanov-2018-withteeth", "amirkhanov-2021-diss", "amirkhanov2010AMA", "ammer-2008-lst", "An-2018-CHI", "AndreUrsits_2013_APP", 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"bruckner-2005-AIV", "bruckner-2005-ATI", "bruckner-2005-ICV", "bruckner-2005-vid", "bruckner-2005-VIS", "bruckner-2006-EVV", "bruckner-2006-ICE", "bruckner-2007-EDF", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2008-IVV", "bruckner-2009-BVQ", "bruckner-2009-IVV", "bruckner-2010-HVC", "bruckner-2010-IFC", "bruckner-2010-ISM", "bruckner-2010-SES", "Bruckner-2012-VEA", "buerger_raphael_2006_3dpoly", "Buerger-2007-cmv", "Buerger-2007-eurovis", "buerger-2007-star", "bugnar-esk-2021", "burns-2007-fea", "bydlinski-2015-gapaot", "byska-2019-mdfc", "Cai_2018", "Caic2021", "Carata_2011_IVE", "carbesser-2013", "casellato-2016-pkg", "cellVIEW_2015", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "Cornel_Daniel_2015_VOC", "Cornel2016CFM", "coto-2005-MAC", "Cruz-thesis", "Csebfalvi-2002-FPVF", "Csebfalvi-2002-SBICG", "Csebfalvi-2002-Smo", "Csebfalvi-2012-IOM", "Csuk_2011", "daae-lampe-2010-dif", "dataset-christmastree", "dataset-present", "dataset-stagbeetle", "Deutsch-2018", "Dhanoa_2021", "Diehl_2015", "Diehl_2021", "Diehl-2017-Albero", "Dietrich_1", "dietrich-2016-viseq2", "diss-thesis-bratislava", "diss-thesis-magdeburg", "diss-thesis-siegen", "djuric-2020-wvo", "donabauer_2019_1", "donabauer-2015-asc", "draeger-2005-chain", "dworschak-2016-szcm", "dworschak-2016-szcm", "Eckelt_2017", "Eckelt_2018_01", "Edi_2019_10_01", "edlinger-2018-vwr", "eg-tut2005-iv", "Ehlers_PhD", "ehlers-2023-iro", "ehlers-thesis", "Eichner2022", "eiweck-hnv-2021", "emsenhuber-2008-vhd", "eschner-2023-evl", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Essler2022", "EuroVis2018-ShortPapers-Karall", "EuroVis2018-ShortPapers-Reiter", "facial2004", "Fechter_2011_DBS", "filipovic-2014-dect", "FISCHL-2012-CTASEG", "fmistelbauer-2014-ad", "fmistelbauer-2014-adict", "Ford-2012-HRV", "fourousan2021", "freiler-2008-ste", "fritz-2009-ieq", "Froehler_Berhnard_2015_ESM", "froschauer-2009-iod", "Fruehstueck_Anna_2015_DOM", "fuchs_raphael_2007_par", "fuchs_vhml", "fuchs-2008-del", "fuchs-vortex", "furmanova_2020", "gadllah_2016", "Gadllah_Hani_2016", "gall_2016", "Gall_2017", "gall_alexander_2016BA", "Gall2020", "Gall2021", "gangl-2018-gpsart", "Ganglberger-2022-cg", "ganglberger2019", "Ganuza", "Ganuza_2015", "Ganuza_MJ_2015_AVe", "Ganuza_ML_2015_ISA", "Ganuza-2017-IVCSGM", "Gavrilescu_2011_VGP", "gavrilescu-2008-vsc", "gavrilescu-2009-postrend", "Gavrilescu-2010-CIE", "Gehrer_Daniel_CUI", "Gehrer-2017", "Gehrer-2017-molmach", "georgiev-2019-cbg", "gerl-2006-vhi", "geymayer-2017-std", "Gietl_2020", "Gillmann2021", "glanznig-2009-LAMC", "glinzner-2016-tex", "Gogel2020", "gostler-2015-3dp", "grammatikaki-thesis", "grimm-2004-arefined", "GRIMM-2004-FDMX-P", "grimm-2004-memory", "GRIMM-2004-PPC", "grimm-2004-volume", "Groeller_2011_CVC", "Groeller_2011_CW", "Groeller_2011_GBC", "Groeller_2011_HP", "Groeller_2011_HSU", "Groeller_2011_IPV", "Groeller_2011_IVP", "Groeller_2011_NR", "Groeller_2011_NSM", "Groeller_2011_VCD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSS", "Groeller_2012_KAV", "Groeller_2012_VBP", "Groeller_2012_ViV", "Groeller_2012_VV", "Groeller_2014_CaQ", "Groeller_2014_CQV", "Groeller_2014_CV", "Groeller_2014_RWA", "Groeller_2014_STC", "Groeller_2014_UPS", "Groeller_2014_VND", "Groeller_2016_I2", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2016_P7", "Groeller_2021_11", "Groeller_2021_BVM", "Groeller_2021-10", "Groeller_Edi_2013_TVC", "Groeller_Edi_2013_VCQ", "Groeller_Edi_2013TVCK", "Groeller_Edi_VKA", "Groeller_Eduard_2014_THS", "Groeller_Eduard_2014_TSP", "Groeller_Eduard_2014_UCT", "Groeller_Eduard_2015_SMV", "Groeller_Eduard_2015_TCU", "Groeller_V1_2020", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V42020", "Groeller_V5_2020", "groeller-2004-efficient", "groeller-2004-imp", "groeller-2004-sci", "groeller-2005-dia", "Groeller-2010-CVC", "Groeller-2010-IFI", "Groeller-2010-IVVI", "Groeller-2011-HSH", "Groeller-2017-ARTORW", "Groeller-2017-AVC", "Groeller-2017-IVAMCS", "Groeller-2017-PTPMD", "Groller_2021-12-03", "Gronde_2008", "Grorller-2010-IVV", "grossmann_2019_pelvisrunner_poster", "Grossmann_MA", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "grossmann-thesis", "Gruenauer-2011-CAT", "Gschwantner_2011_AMQ", "gundacker-2020-wlm", "Gurbat_2011_SBS", "gusenbauer-2018", "gusenbauer-2018", "gusenbauer-2018-P", "gutekunst_2019", "Hadwiger-2002-Fas", "haidacher_2010_statTF", "haidacher-2004-FVV", "haidacher-2005-MND", "haidacher-2007-idr", "haidacher-2008-vcbm", "haidacher-2011-MSM", "haidacher-2011-phd", "haidacher-2011-VAM", "Hainoun2019", "Halladjian_2020", "hanzl-2011", "hartl-2008-vcd", "hartmann-2005-adv", "haushofer-2018-skinning", "Heim_2020", "Heim_2021", "Heim-2017", "heim-gall-2020-dde", "heinzl_2006_RSDVCDM", "heinzl-2006-rep", "heinzl-2008-sam", "Heinzl2021", "Herghelegiu-2012-BPV", "herzberger-2023-swv", "herzberger-2024-roh", "Hirsch_Christian_2015_ABL", "Hladuvka-2002-Exp", "hladuvka-2002-exploiting", "Hochmayr_Manuel_2015_PSE", "hochmayr_manuel-2011-VoRMD", "Hochpoechler_2016_VR", "horvath-2018-ism", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "irger-2023-ves", "Ismail-2018", "jank-2022-cbf", "Kanitsar-2002-CPR", "Kanitsar-2003-Adva", "Kanitsar-2003-Dem", "Kanitsar-2004-Dia", "Kanitsar-thesis", "kapferer-2017-godot", "Karall2017CVAB", "Karall2018_2", "karimov-2013-vivisection", "karimov-2015-HD", "karimov-2016-GIVE", "karimov-2016-SD", "keglevic_schulz-2011-MB", "Kehrer-2008-hyp", "Kehrer-2010-mom", "kehrer-2011-vai", "kehrer-2012-mod", "kehrer-2013-IVA", "kehrer-2013-SBC", "Kehrer-2013-STAR", "Kehrer-2014-CSD", "kimmersdorfer-fancyMaps-2023", "Kinkelin_2009", "Kinkelin-2011-VR", "Kleber-2004-TFE", "klein_2017_IM", "klein_2019_MSA_Poster", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Klein_Tobias_2015TIV", "klein-thesis", "Knapp_2017_CVR", "knapp_michael_2004_MAS", "knapp-2004-semi", "koch_bernhard_2018-1", "koch-2018-sso", "koehle-2013-sgv", "koeppel-2021", "Koeppel2020", "Kohlmann-2007-EBV", "kohlmann-2007-livesync", "kohlmann-2008-lse", "kohlmann-2009-cp", "kohlmann-2009-lssl", "kolesar-ivan-2014-polymers", "Kolter_2021", "Konyha_2013_IVA", "korpitsch_thorsten-2019", "korpitsch-2020-cescg", "Korpitsch-2020-wscg", "korpitsch-2021-lov", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2018-LoL", "kouril-2018-LoL", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kovacs_PhD", "krakhofer-2015", "Krone2016VABC", "kuehschelm-2005-adv", "Kugler_2019", "Kuroko-2020-iV", "Labschuetz_Matthias_2015_JIT", "Labschuetz_Matthias_2016_AHD", "Labschuetz_Matthias_2016_JIT", "Labschuetz_Matthias_2016_JITT", "Lackner_2022", "LaCruz2004", "Ladstaedter-2009-sim", "Langer_Edith_IR1", "Langer_Maximillian_DMV", "Laschober-2018", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lemuzic-mindek-sorger-cgfcc", "Leutschacher_2022", "li-2019-gdc", "lie-2009-cri", "lipp-2017-mgpu", "lipp-2017-vulkan", "lippeck-2022-mna", "liu-2014-ac", "lkoell-2014", "ludwig-2012-MT", "Machegger2018DTI", "magg-2021-dva", "magg2021", "mahler-2021-mdar", "major-2010-mrf", "malan_fluoro", "malik-2007-FP", "malik-2009-CVFA", "malik-thesis", "Manczarski-2016", "Marek06", "Maricic_2013_VFE", "martorell2022", "maruyama-2019-iv", "Masopust_2018", "Masterthesis-Viola", "Matkovic_Kresimir_2015_", "matt-2023-vae", "matt-masterthesis", "Mattausch-2003-ISL", "Mattausch-2003-SIE", "Mattausch-2003-Str", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "Mazza_2020", "Mazza_2021_05", "Melo_2018_11", "Meusburger_2020", "Miao_2015_VCBM", "Miao_2019", "Miao_Haichao_2015_VQC", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_plitvice_2018", "miao_thesis_2019", "miao_tvcg_2017", "miao_tvcg_2018", "miao_tvcg_2018", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Michl_2017_CSV", "mindek_peter-2012-visgroupproj", "mindek_peter-2014-cs_kaust", "mindek-2013-cs_cvut", "mindek-2013-csl", "mindek-2013-pel", "mindek-2014-mcs", "mindek-2014-vivi_cvut", "mindek-2015-mc", "mindek-2015-mctalk", "mindek-2016-utah-talk", "mindek-2017-dsn", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-thesis", "mistelbauer_2013_SIV", "Mistelbauer_2021", "Mistelbauer_Gabriel_2015_NHR", "Mistelbauer_Gabriel_2016", "mistelbauer-2010-pvv", "mistelbauer-2012-cr", "mistelbauer-2012-ssv", "mistelbauer-2013-cfa", "mistelbauer-2015-abvv", "Mitterhofer_2017", "mizuno-2019-eurovis", "Mlejnek_2004_PF", "Mlejnek_2005_AOEPF", "Mlejnek_2006_MVOA", "Mlejnek-2004-Int", "Mlejnek-2004-ITVAC", "Mlinaric-2015-MT", "Moellinger_Christian_IDE2", "moerth_eric-2016-3DF", "moerth-2018-tpose", "monitzer_2008_FluSi", "Morar_2012_ISB", "Muehlbacher_diss_2018", "mueller-2009-ivs", "Muigg_2011_ISI", "Muigg_2011_VC", "Muigg-2008-four", "muigg-2012-svr", "Musleh_PhD", "Neumann-2002-Fea", "nguyen_2020-covid", "Niedermayer_2018", "Novotny_2013_ASVD", "Nowak_2020", "Nowak_2021", "Oancea_2018_1", "Oancea_Stefan_2016_VOT", "Oancea2018OAK", "oeltze-2013-tut", "opitz-2009-cvv", "Ortner_PhD", "Ortner2020", "Pahr_PhD", "pahr-2021-vologram", "pahr-thesis", "Pahr2020", "Pajer_2012_VoM", "Panayotov", "Parzer_2013_IIG", "patel_2009_MC", "patel_daniel_2007_IRSD", "patel-2008-tsa", "patel-2009-evr", "patel-2011-PEA", "Pauschenwein_2022", "Peter_2012_AIV", "Pezenka-2016-MT", "Pfahler_David_2015_IPI", "Pfahler-2016-MT", "PH-2011-LDS", "phd-viola", "Philipp_Hochhauser_2023", "Pilizar_-2020-bachelor", "piringer-2009-hds", "Plank_Pascal_2015_HVP", "plank-2017-sldg", "PMI_AR_2012", "pointner_simon-2020", "polatsek-2018-stv", "polatsek-2018-stv", "Pramerdorfer-2011-PAV", "preim-2009-sve", "Presch_2020", "Priselac2021", "puehringer-2009-sbm", "puenguentzky-2014-ht", "Purchase-2020-gd", "raidou_2018_bladderrunner", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_2020Onc", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_RO2019", "raidou_shonan167", "raidou_slicedice", "raidou_star2019", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2018_rv3", "raidou2018visualflatter", "raidou2019_prsps", "rasch-2016-imgses", "Rau08", "Rautek_Peter_2014_TUC", "Rautek_Peter_2014_VSA", "rautek-2005-dvr", "Rautek-2007-O3D", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-kav", "Rautek-2008-VF", "rautek-2009-vmv", "RAUTEK06", "Rautek06Vis", "Rautek06VMLS", "rautek2010", "Red_Andreas_2015_FFT", "Reh_Andreas_VoP", "reh-2013", "reina-2020-mtv", "Reisacher_Matthias_CPW", "Reisacher2016", "Reiter_2009_IXIA", "Reiter2017CVAP", "Rezk06Vis", "Ribicic_2012_SUS", "Ribicic_2012_VAS", "Ribicic-2010-CRS", "Riegelnegg_2019", "rinortner_susanne-2019-vpicc", "rinortner_susanne-2019-vpicc", "Rippberger_2019", "rippl-2023-atg", "ritzberger-2010-nar", "Ropinski-2012-UBT", "rraidou_clinical", "rraidou_EG17", "rraidou_phdbook", "rsabin-2013", "ruiz-2008-OVR", "ruiz-2008-SEV", "samoul-2019-cnp", "Sanjin_Rados_RV", "Sarkis_2021", "Sbardellati-2019-vcbm", "Sbardellati-2019-vcbm", "sbardellati-2021-eveos", "scharsach-2005-adv", "Schernthaner-2017-MCP", "schindler_2020vis", "Schindler-2022-eurovis", "schindler2020", "schleicher-2011-VLSC", "Schmidlehner_Sandra_SbC", "schmidlehner2021", "schmidt-2011-mt", "schmidt-phd", "schmidt-phd", "schoellhuber-2008-asc", "scholz_2021", "Schrempf_2018", "Schrempf_2020", "SCHUETZ-2023-SIMLOD", "schuh-2018-mesh-blending", "Schulze_Florian_2013_CMI", "schwankl-2013-smis", "seyfert-2017", "shakhova-2023-atp", "sietzen-2019-wnn", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sifuentes-2018-crowd", "SifuentesGangl2017FIS", "sikachev_peter_2010_STLCI", "sikachev_peter-2011-dfc", "sikachev_peter-2011-incshad", "sikachev_peter-2011-metavis", "sikachev_peter-2011-protovis", "sikachev-2010-DFC", "sikachev-2010-ill_vis_vol_ren", "Sippl_Sebastian_EFG", "smiech-2018-tei", "Smisek_Michal_A3D", "Sollboeck_2011_FSS", "sollboeck-2011", "Solteszova-2009-VQN", "solteszova-2010-MOS", "Solteszova2016", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "Soros_AVN_2011", "Soros-AV-2010", "Spechtenhauser_Florian_2016", "spegel-gruenberger-2020", "Spelitz2020", "spoerk-2010-hpgpu", "Stabel_2012_UDM", "stappen_2017_animatedcomic", "Staudacher_2022", "staudacher_florian-2016-topo3d", "stehno-2011-RVD", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "StickmanMax-shoetta-kampfer", "stoff-concepMap-2021", "StrakaVis2004", "stritzel2022", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "suntinger-2008-etet", "suntinger-2008-tet", "Swoboda_Nicolas_VIT", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "termeer-2006-000", "termeer-2007-covicad", "termeer-2008-scmr", "termeer-2008-vis", "termeer-2009-cvc", "termeer-2009-scmr", "textures-3d-printing", "thesis-tekaya", "Thomas-2018", "Thurner-2005-IVR", "toth-2007-ndd", "TR-186-2-05-01", "TR-186-2-05-02", "TR-186-2-05-03", "TR-186-2-05-04", "TR-186-2-05-06", "TR-186-2-05-07", "TR-186-2-05-08", "TR-186-2-06-01", "TR-186-2-06-02", "TR-186-2-06-03", "TR-186-2-06-04", "TR-186-2-07-02", "TR-186-2-07-03", "TR-186-2-07-04", "TR-186-2-07-05", "TR-186-2-07-06", "TR-186-2-07-07", "TR-186-2-07-08", "TR-186-2-07-10", "TR-186-2-07-11", "TR-186-2-07-12", "TR-186-2-08-01", "TR-186-2-08-02", "TR-186-2-08-03", "TR-186-2-08-04", "TR-186-2-08-05", "TR-186-2-08-06", "TR-186-2-08-07", "TR-186-2-08-08", "TR-186-2-08-10", "TR-186-2-08-11", "TR-186-2-08-12", "TR-186-2-08-14", "TR-186-2-09-01", "TR-186-2-15-03", "TR1862162", "Tramberger_2018", "Tramberger2017BCS", "Trautner_Thomas_2014_VAE", "trautner-2018-imd", "trautner-2018-imd", "travnicek-2017-thm", "Trenkwalder-2004-MAR", "Troidl_2019", "Troidl_2021", "Troidl_2022", "turner-aso", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "tweebo-2014", "ulschmid-2024-reo", "unger_2017", "unger-2019_vcp", "Unger2020", "vad_2015_phd", "Vad_Viktor_2015_RVV", "vad-2016-bre", "vaico", "varchola_andrej-2012-fetoscopic", "Vasileva_2022", "Vasileva-2018", "vessel2003", "Viola_2013_IDV", "Viola_Ivan_2013_CAI", "Viola_Ivan_2013_D3D", "Viola_Ivan_2013_DC", "Viola_Ivan_2013_GS", "Viola_Ivan_2013_HQ3", "Viola_Ivan_2013_RMA", "Viola_Ivan_2013_RSb", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_DAC", "Viola_Ivan_IIP", "Viola_Ivan_UVP", "Viola_Ivan_VDP", "Viola-05-Smart", "Viola-2003-GPU", "Viola-2003-Har", "viola-2003-hbn", "Viola-2003-NON", "viola-2004-gbf", "Viola-2004-GPU", "viola-2004-har", "viola-2004-har2", "viola-2004-idv", "viola-2004-imp", "Viola-2004-ImpX", "Viola-2004-ImpX2", "viola-2005-imp", "viola-2006-FoA", "viola-evr", "Viola-Pondering-2017", "viola-popular-article-2006", "Viola-vistutillustrativevis", "vis-foa", "VisWeek-Tutorial-2012-Uncertainty", "vitruvian_2019", "voglreiter-2023-tro", "Vucenovic_2022", "vucini_2006", "vucini_2008_rnp", "vucini_2009", "vucini_erald-2007-FRI", "vucini-2009-phd", "vucini-2011", "Wagner_032017", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2016_Chameleon", "Waldin_Nicholas_2017_FlickerObserver", "Waldin_Nicholas_2017_FlickerObserver", "Waldin_Nicholas_2017_FlickerObserver", "waldin-2017-thesis", "waldin-2019-ccm", "waldin-2019-ccm", "Waldner_2017_11", "Waldner_2017_11", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-af", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2018-ved", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "Waser-2010-WL", "webGPU_aggregateVis-2023", "weiner_2011", "Weissenboeck_2019", "Weissenboeck_2019_PhD", "weissenboeck-2014", "Wihann_2017", "wolf-2023-cc", "Woschizka_2021", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg", "wu-2021", "wu-2021-vi", "xmastree2002", "xmastree2005", "ymca", "YOGHOURDJIAN2019", "Zambal-2003-SWA", "zambal-2005-3dact", "Zaufel_2021", "zauner-2013-svkinect", "zechmeister2020", "Zeng_2021", "Zhu-2014-flowvis" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Workgroup&id=vis", "__class": "Workgroup" }, { "id": "VRVis", "workgroup_id": "External", "drupal_id": 4155, "name": "VRVis Competence Center", "name_de": null, "website": null, "status": "active", "short_abstract": "The VRVis K1 Research Center is the leading application oriented research center in the area of virtual reality (VR) and visualization (Vis) in Austria and is internationally recognized. You can find extensive Information about the VRVis-Center here
\r\n", "abstract": "The VRVis K1 Research Center is the leading application oriented research center in the area of virtual reality (VR) and visualization (Vis) in Austria and is internationally recognized. You can find extensive Information about the VRVis-Center here
\r\n", "start_date": "2000-01-01", "end_date": null, "leader_id": 190, "logo": { "name": "logo.png", "path": "project:VRVis", "type": "image/png", "size": 3275, "orig_name": "logo.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/VRVis/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "K1", "contract_number": null, "comment": null } ], "research_areas": [], "publications": [ "Ahmed-2008-EGVE", "Bauer_Dominik_2018_VR", "Berger_2011_UAE", "brunnhuber-2010-behavior-handicapped", "Cai_2018", "CORNEL-2014-AFRS", "CORNEL-2017-FRS", "CORNEL-2019-IVF", "cornel-2022-wih", "donabauer_2019_1", "Eibner-12", "ERLER-2017-HVR", "Freiler-2008-Set", "Gan-2011-ICU", "Ganuza", "Ganuza-2017-IVCSGM", "ilcik-2008-sgfa", "Kathi-2018-VRB", "kavelar_albert_2010_ebic", "Kellner-2021-DA", "kim_2009_iPhone", "Kim-2008_FWIP", "Konev-FCV2018", "konyha_2006_int", "Konyha_2007_SCV", "Konyha_2009_survey", "kroesl-2017-LiteMaker", "kroesl-2018-DC", "kroesl-2018-TVS", "kroesl-2019-ICthroughVR", "Laramee-2004-thesis", "ludwig-2012-MT", "luksch_2020", "LUKSCH-2014-RTR", "LUKSCH-2019-IGI", "Mantler-2011-GEAR", "matkovic_2009_flickr", "matkovic-2007-clv", "Matkovic-2008-Bergen", "Matkovic-2008-ComVis", "Matkovic-2008-med", "Matkovic-2008-Steer", "matkovic-2010-eventlineview", "Matkovic-2014-ieee", "May_Michael_2015_DIS", "MEINDL-2015-OSR", "Miklin-2009-Mig", "Muehlbacher_diss_2018", "musialski-2009-sbfr", "musialski-2010-imv", "musialski-2010-pfi", "musialski-2010-tof", "ortner-2016-tunnel", "ortner-2016-visaware", "PB-VRVis-2018-005", "Pfahler-2016-MT", "PROST-2017-RTL", "PROST-2019-RTPAL", "Przemyslaw-2010-ADS", "Purg2015-b", "Purg2015-c", "Purg2015-China", "Purg2015-d", "purgathofer_2016I1", "Purgathofer-2013-cvws", "Purgathofer-2014-ETH", "Purgathofer-2014-LSM", "Purgathofer-2014-PanEu", "Purgathofer-2014-Rio", "Purgathofer-2015-WA", "Purgathofer-2017-China1", "Purgathofer-2017-China2", "Purgathofer-2017-VC-Interface", "Purgathofer-2018-EG", "Rainer_2017", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reichinger-2011-Tac", "Reichinger-2016-spaghetti", "Reichinger-2018-TAC", "reisner-2010-1dh", "reisner-2010-ind", "reisner-2011-akgeo", "reisner-2011-comdm", "reisner-2012-iwssip", "SCHOBER-2006-IVSA", "schuetz-2019-CLOD", "schwaerzler_2018_phd", "SCHWAERZLER-2017-SBGM", "Shi_2007_PathLines", "Singh-2008-Metric", "sorger-2013-neuromap", "sorger-2015-litevis", "sorger-2015-taxintec", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "STEINLECHNER-2019-APS", "STEINLECHNER-2019-ICT", "STREICHER-2022-DSLS", "Szabo-2018-DA", "Trobec-2008-Heart", "Walch-2017-DA", "Wimmer_Maria_2015_SAS", "Zusag-2017-Bach" ], "url": "https://www.cg.tuwien.ac.at/research/projects/VRVis", "__class": "Project" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2017/sorger-2017-thesis/", "__class": "Publication" }, { "id": "sorger_2017_metamorphers", "type_id": "inproceedings", "tu_id": null, "repositum_id": null, "title": "Metamorphers: Storytelling Templates For Illustrative Animated Transitions in Molecular Visualization", "date": "2017-05", "abstract": "In molecular biology, illustrative animations are used to convey complex biological phenomena to broad audiences. However, such animations have to be manually authored in 3D modeling software, a time consuming task that has to be repeated from scratch for every new data set, and requires a high level of expertise in illustration, animation, and biology. We therefore propose metamorphers: a set of operations for defining animation states as well as the transitions to them in the form of re-usable story telling templates. The re-usability is two-fold. Firstly, due to their modular nature, metamorphers can be re-used in different combinations to create a wide range of animations. Secondly, due to their abstract nature, metamorphers can be re-used to re-create an intended animation for a wide range of compatible data sets. Metamorphers thereby mask the low level complexity of explicit animation specifications by exploiting the inherent properties of the molecular data, such as the position, size, and hierarchy level of a semantic data subset.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "teaser", "main_file": true, "use_in_gallery": true, "access": "public", "image_width": 6011, "image_height": 1167, "name": "sorger_2017_metamorphers-teaser.png", "type": "image/png", "size": 2870066, "path": "Publication:sorger_2017_metamorphers", "url": "https://www.cg.tuwien.ac.at/research/publications/2017/sorger_2017_metamorphers/sorger_2017_metamorphers-teaser.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2017/sorger_2017_metamorphers/sorger_2017_metamorphers-teaser:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1072, "drupal_id": 1056, "orcid_id": null, 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"short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" } ], "keywords": [ "animated transitions", "storytelling", "molecular visualization" ], "weblinks": [], "files": [ { 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"website": "https://www.cg.tuwien.ac.at/group/Visualization-Group", "projects": [ "ADAPT", "AngioVis", "Animated Cell Tab development", "AutARG", "avr", "BioNetIllustration", "COMRADE", "d4328", "d4335", "d4534", "d9275", "d9282", "d9522", "d9555", "deskollage", "diagvis", "exvisation", "Illustrare", "illvisation", "KASI", "ManyViews", "NeuroViewer", "ProcessIllVis", "ProKeyAnim", "PVG", "Scale-VS", "Scenario Pool", "Semantic Steering", "Sim-CT", "Smart-CT", "Smile Analytics", "ViMaL", "VISAR" ], "research_areas": [ "BioVis", "IllVis", "InfoVis", "MedVis", "NetVis", "Perception", "VisMat", "VR" ], "publications": [ "2013_Viola_Ivan_2013_MTS", "2015-image-coll", "2017-kouril-illcell", "2019-ic", "AA2020", "alacruzECR2004", "alacruzVisSym2004", "Alharbi_2021", "Alsallakh_2012_RCW", "alsallakh-2009-iva", "altendorfer-2008-vts", "amabili2021", "amirkhanov_2012", "amirkhanov_2012heur", "amirkhanov-2011", "amirkhanov-2014-ama", "amirkhanov-2018-withteeth", "amirkhanov-2021-diss", 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"bront-2023-svo", "brucker-2010-RES", "Bruckner_Stefan_2015_VAS", "bruckner-2004-EVV", "bruckner-2005-AIV", "bruckner-2005-ATI", "bruckner-2005-ICV", "bruckner-2005-vid", "bruckner-2005-VIS", "bruckner-2006-EVV", "bruckner-2006-ICE", "bruckner-2007-EDF", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2008-IVV", "bruckner-2009-BVQ", "bruckner-2009-IVV", "bruckner-2010-HVC", "bruckner-2010-IFC", "bruckner-2010-ISM", "bruckner-2010-SES", "Bruckner-2012-VEA", "buerger_raphael_2006_3dpoly", "Buerger-2007-cmv", "Buerger-2007-eurovis", "buerger-2007-star", "bugnar-esk-2021", "burns-2007-fea", "bydlinski-2015-gapaot", "byska-2019-mdfc", "Cai_2018", "Caic2021", "Carata_2011_IVE", "carbesser-2013", "casellato-2016-pkg", "cellVIEW_2015", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "Cornel_Daniel_2015_VOC", "Cornel2016CFM", "coto-2005-MAC", "Cruz-thesis", "Csebfalvi-2002-FPVF", "Csebfalvi-2002-SBICG", "Csebfalvi-2002-Smo", "Csebfalvi-2012-IOM", "Csuk_2011", "daae-lampe-2010-dif", "dataset-christmastree", "dataset-present", "dataset-stagbeetle", "Deutsch-2018", "Dhanoa_2021", "Diehl_2015", "Diehl_2021", "Diehl-2017-Albero", "Dietrich_1", "dietrich-2016-viseq2", "diss-thesis-bratislava", "diss-thesis-magdeburg", "diss-thesis-siegen", "djuric-2020-wvo", "donabauer_2019_1", "donabauer-2015-asc", "draeger-2005-chain", "dworschak-2016-szcm", "dworschak-2016-szcm", "Eckelt_2017", "Eckelt_2018_01", "Edi_2019_10_01", "edlinger-2018-vwr", "eg-tut2005-iv", "Ehlers_PhD", "ehlers-2023-iro", "ehlers-thesis", "Eichner2022", "eiweck-hnv-2021", "emsenhuber-2008-vhd", "eschner-2023-evl", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Essler2022", "EuroVis2018-ShortPapers-Karall", "EuroVis2018-ShortPapers-Reiter", "facial2004", "Fechter_2011_DBS", "filipovic-2014-dect", "FISCHL-2012-CTASEG", "fmistelbauer-2014-ad", "fmistelbauer-2014-adict", "Ford-2012-HRV", "fourousan2021", "freiler-2008-ste", "fritz-2009-ieq", "Froehler_Berhnard_2015_ESM", "froschauer-2009-iod", "Fruehstueck_Anna_2015_DOM", "fuchs_raphael_2007_par", "fuchs_vhml", "fuchs-2008-del", "fuchs-vortex", "furmanova_2020", "gadllah_2016", "Gadllah_Hani_2016", "gall_2016", "Gall_2017", "gall_alexander_2016BA", "Gall2020", "Gall2021", "gangl-2018-gpsart", "Ganglberger-2022-cg", "ganglberger2019", "Ganuza", "Ganuza_2015", "Ganuza_MJ_2015_AVe", "Ganuza_ML_2015_ISA", "Ganuza-2017-IVCSGM", "Gavrilescu_2011_VGP", "gavrilescu-2008-vsc", "gavrilescu-2009-postrend", "Gavrilescu-2010-CIE", "Gehrer_Daniel_CUI", "Gehrer-2017", "Gehrer-2017-molmach", "georgiev-2019-cbg", "gerl-2006-vhi", "geymayer-2017-std", "Gietl_2020", "Gillmann2021", "glanznig-2009-LAMC", "glinzner-2016-tex", "Gogel2020", "gostler-2015-3dp", "grammatikaki-thesis", "grimm-2004-arefined", "GRIMM-2004-FDMX-P", "grimm-2004-memory", "GRIMM-2004-PPC", "grimm-2004-volume", "Groeller_2011_CVC", "Groeller_2011_CW", "Groeller_2011_GBC", "Groeller_2011_HP", "Groeller_2011_HSU", "Groeller_2011_IPV", "Groeller_2011_IVP", "Groeller_2011_NR", 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Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "Modeling", "drupal_id": 4130, "name": "Modeling", "short_abstract": "In this area, we focus on researching methods and algorithms that facilitate creation, representation, analysis and processing of 3D models.", "abstract": "One of the major bottlenecks in the field of computer graphics is the one of content creation, particularly the creation of high-quality 3D geometric models. These models are a demand in many industries, such as entertainment, computer-aided design, urban planning, the fabrication of physical objects, as well as research areas like medical or scientific visualizations and simulations.\n\nWhile rendering - the classical field of computer graphics - has reached very high standards in the recent two decades, the issue of the creation of appropriate digital models is a difficult problem that hardly keeps pace with current demands. Indeed, it is a complex creative process that involves both artistic and technical skills.\n\nTo make this process easier, our goal in this research area is to find new methods and algorithms that facilitate creation, representation, analysis and processing of 3D models.", "website": "https://www.cg.tuwien.ac.at/research/area/Modeling", "teaser": { "name": "teaser.jpg", "path": "research_area:Modeling", "type": "image/jpeg", "size": 190581, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/Modeling/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "rend" ], "publications": [ "AA2020", "Adorjan-2015", "aichner-2016-sadf", "arikan-2013-osn", "birsak-thesis", "Birsak2018-SA", "Brandstaetter2020", "brunner_lukas_2022_ssb", "Caic2021", "clemenz_2019_rosy_fields", "DOG10", "dusberger-2010-msm", "eibens-2021-tsgpmg", "eibensteiner-2021-pmcg", "eibner-2009-gpc", "erler_2024_ppsurf", 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{ "id": "vis", "drupal_id": 1354, "name": "Visualization Group", "website": "https://www.cg.tuwien.ac.at/group/Visualization-Group", "projects": [ "ADAPT", "AngioVis", "Animated Cell Tab development", "AutARG", "avr", "BioNetIllustration", "COMRADE", "d4328", "d4335", "d4534", "d9275", "d9282", "d9522", "d9555", "deskollage", "diagvis", "exvisation", "Illustrare", "illvisation", "KASI", "ManyViews", "NeuroViewer", "ProcessIllVis", "ProKeyAnim", "PVG", "Scale-VS", "Scenario Pool", "Semantic Steering", "Sim-CT", "Smart-CT", "Smile Analytics", "ViMaL", "VISAR" ], "research_areas": [ "BioVis", "IllVis", "InfoVis", "MedVis", "NetVis", "Perception", "VisMat", "VR" ], "publications": [ "2013_Viola_Ivan_2013_MTS", "2015-image-coll", "2017-kouril-illcell", "2019-ic", "AA2020", "alacruzECR2004", "alacruzVisSym2004", "Alharbi_2021", "Alsallakh_2012_RCW", "alsallakh-2009-iva", "altendorfer-2008-vts", "amabili2021", "amirkhanov_2012", "amirkhanov_2012heur", "amirkhanov-2011", "amirkhanov-2014-ama", "amirkhanov-2018-withteeth", "amirkhanov-2021-diss", "amirkhanov2010AMA", "ammer-2008-lst", "An-2018-CHI", "AndreUrsits_2013_APP", "antes-2023-vhv", "Antonini2020", "arbesser_ba_2023", "Artner-2004-Hig", "Artner-2005-Hig", "Artner-2005-Thesis", "audioflow", "Auzinger_Mistelbauer_2013_CSR", "balabanian-2007-ant", "balabanian-2008-hvv", "Balabanian-2010-IIV", "Balabanian-2010-PSDSV", "Balduz_01", "Basch_2011_ATA", "Bauer_David_2018", "Bauer_Johannes_2014_IWB", "bauer-2015-cbfd", "Bayat_2019", "bayer-2015-gapaot", "bbeer-2013", "Bechtold2020", "Beer_2011_DVE", "Beham_Michael_PSC", "beham-2014-cupid", "bernhard-2006-dvrcta", "bernhard-2014-GTOM", "bernhard-2016-gft", "Bernold_2019", "bernold-2019-epr", "bhore-2021-issac", "birkeland_aasmund_2014_pums", "Birkeland-2012-IMC", "BirsakHanzl-2009", "boeroendy-2022-uio", "boesch_2014_browserHistoryVis", "borgo-2013-gly", "borondy2022", "bouzari-thesis", "Brandorff-08-OV", "brandorff-2009-erv", "brandstaetter_01", "brandstaetter-2007-vosd", "Brandstaetter2020", "breitenecker-2020-bct", "bront-2023-svo", "brucker-2010-RES", "Bruckner_Stefan_2015_VAS", "bruckner-2004-EVV", "bruckner-2005-AIV", "bruckner-2005-ATI", "bruckner-2005-ICV", "bruckner-2005-vid", "bruckner-2005-VIS", "bruckner-2006-EVV", "bruckner-2006-ICE", "bruckner-2007-EDF", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2008-IVV", "bruckner-2009-BVQ", "bruckner-2009-IVV", "bruckner-2010-HVC", "bruckner-2010-IFC", "bruckner-2010-ISM", "bruckner-2010-SES", "Bruckner-2012-VEA", "buerger_raphael_2006_3dpoly", "Buerger-2007-cmv", "Buerger-2007-eurovis", "buerger-2007-star", "bugnar-esk-2021", "burns-2007-fea", "bydlinski-2015-gapaot", "byska-2019-mdfc", "Cai_2018", "Caic2021", "Carata_2011_IVE", "carbesser-2013", "casellato-2016-pkg", "cellVIEW_2015", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "Cornel_Daniel_2015_VOC", "Cornel2016CFM", "coto-2005-MAC", "Cruz-thesis", "Csebfalvi-2002-FPVF", "Csebfalvi-2002-SBICG", "Csebfalvi-2002-Smo", "Csebfalvi-2012-IOM", "Csuk_2011", "daae-lampe-2010-dif", "dataset-christmastree", "dataset-present", "dataset-stagbeetle", "Deutsch-2018", "Dhanoa_2021", "Diehl_2015", "Diehl_2021", "Diehl-2017-Albero", "Dietrich_1", "dietrich-2016-viseq2", "diss-thesis-bratislava", "diss-thesis-magdeburg", "diss-thesis-siegen", "djuric-2020-wvo", "donabauer_2019_1", "donabauer-2015-asc", "draeger-2005-chain", "dworschak-2016-szcm", "dworschak-2016-szcm", "Eckelt_2017", "Eckelt_2018_01", "Edi_2019_10_01", "edlinger-2018-vwr", "eg-tut2005-iv", "Ehlers_PhD", "ehlers-2023-iro", "ehlers-thesis", "Eichner2022", "eiweck-hnv-2021", "emsenhuber-2008-vhd", "eschner-2023-evl", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Essler2022", "EuroVis2018-ShortPapers-Karall", "EuroVis2018-ShortPapers-Reiter", "facial2004", "Fechter_2011_DBS", "filipovic-2014-dect", "FISCHL-2012-CTASEG", "fmistelbauer-2014-ad", "fmistelbauer-2014-adict", "Ford-2012-HRV", "fourousan2021", "freiler-2008-ste", "fritz-2009-ieq", "Froehler_Berhnard_2015_ESM", "froschauer-2009-iod", "Fruehstueck_Anna_2015_DOM", "fuchs_raphael_2007_par", "fuchs_vhml", "fuchs-2008-del", "fuchs-vortex", "furmanova_2020", "gadllah_2016", "Gadllah_Hani_2016", "gall_2016", "Gall_2017", "gall_alexander_2016BA", "Gall2020", "Gall2021", "gangl-2018-gpsart", "Ganglberger-2022-cg", "ganglberger2019", "Ganuza", "Ganuza_2015", "Ganuza_MJ_2015_AVe", "Ganuza_ML_2015_ISA", "Ganuza-2017-IVCSGM", "Gavrilescu_2011_VGP", "gavrilescu-2008-vsc", "gavrilescu-2009-postrend", "Gavrilescu-2010-CIE", "Gehrer_Daniel_CUI", "Gehrer-2017", "Gehrer-2017-molmach", "georgiev-2019-cbg", "gerl-2006-vhi", "geymayer-2017-std", "Gietl_2020", "Gillmann2021", "glanznig-2009-LAMC", "glinzner-2016-tex", "Gogel2020", "gostler-2015-3dp", "grammatikaki-thesis", "grimm-2004-arefined", "GRIMM-2004-FDMX-P", "grimm-2004-memory", "GRIMM-2004-PPC", "grimm-2004-volume", "Groeller_2011_CVC", "Groeller_2011_CW", "Groeller_2011_GBC", "Groeller_2011_HP", "Groeller_2011_HSU", "Groeller_2011_IPV", "Groeller_2011_IVP", "Groeller_2011_NR", "Groeller_2011_NSM", "Groeller_2011_VCD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSD", "Groeller_2011_VSS", "Groeller_2012_KAV", "Groeller_2012_VBP", "Groeller_2012_ViV", "Groeller_2012_VV", "Groeller_2014_CaQ", "Groeller_2014_CQV", "Groeller_2014_CV", "Groeller_2014_RWA", "Groeller_2014_STC", "Groeller_2014_UPS", "Groeller_2014_VND", "Groeller_2016_I2", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2016_P7", "Groeller_2021_11", "Groeller_2021_BVM", "Groeller_2021-10", "Groeller_Edi_2013_TVC", "Groeller_Edi_2013_VCQ", "Groeller_Edi_2013TVCK", "Groeller_Edi_VKA", "Groeller_Eduard_2014_THS", "Groeller_Eduard_2014_TSP", "Groeller_Eduard_2014_UCT", "Groeller_Eduard_2015_SMV", "Groeller_Eduard_2015_TCU", "Groeller_V1_2020", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V42020", "Groeller_V5_2020", "groeller-2004-efficient", "groeller-2004-imp", "groeller-2004-sci", "groeller-2005-dia", "Groeller-2010-CVC", "Groeller-2010-IFI", "Groeller-2010-IVVI", "Groeller-2011-HSH", "Groeller-2017-ARTORW", "Groeller-2017-AVC", "Groeller-2017-IVAMCS", "Groeller-2017-PTPMD", "Groller_2021-12-03", "Gronde_2008", "Grorller-2010-IVV", "grossmann_2019_pelvisrunner_poster", "Grossmann_MA", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "grossmann-thesis", "Gruenauer-2011-CAT", "Gschwantner_2011_AMQ", "gundacker-2020-wlm", "Gurbat_2011_SBS", "gusenbauer-2018", "gusenbauer-2018", "gusenbauer-2018-P", "gutekunst_2019", "Hadwiger-2002-Fas", "haidacher_2010_statTF", "haidacher-2004-FVV", "haidacher-2005-MND", "haidacher-2007-idr", "haidacher-2008-vcbm", "haidacher-2011-MSM", "haidacher-2011-phd", "haidacher-2011-VAM", "Hainoun2019", "Halladjian_2020", "hanzl-2011", "hartl-2008-vcd", "hartmann-2005-adv", "haushofer-2018-skinning", "Heim_2020", "Heim_2021", "Heim-2017", "heim-gall-2020-dde", "heinzl_2006_RSDVCDM", "heinzl-2006-rep", "heinzl-2008-sam", "Heinzl2021", "Herghelegiu-2012-BPV", "herzberger-2023-swv", "herzberger-2024-roh", "Hirsch_Christian_2015_ABL", "Hladuvka-2002-Exp", "hladuvka-2002-exploiting", "Hochmayr_Manuel_2015_PSE", "hochmayr_manuel-2011-VoRMD", "Hochpoechler_2016_VR", "horvath-2018-ism", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "irger-2023-ves", "Ismail-2018", "jank-2022-cbf", "Kanitsar-2002-CPR", "Kanitsar-2003-Adva", "Kanitsar-2003-Dem", "Kanitsar-2004-Dia", "Kanitsar-thesis", "kapferer-2017-godot", "Karall2017CVAB", "Karall2018_2", "karimov-2013-vivisection", "karimov-2015-HD", "karimov-2016-GIVE", "karimov-2016-SD", "keglevic_schulz-2011-MB", "Kehrer-2008-hyp", "Kehrer-2010-mom", "kehrer-2011-vai", "kehrer-2012-mod", "kehrer-2013-IVA", "kehrer-2013-SBC", "Kehrer-2013-STAR", "Kehrer-2014-CSD", "kimmersdorfer-fancyMaps-2023", "Kinkelin_2009", "Kinkelin-2011-VR", "Kleber-2004-TFE", "klein_2017_IM", "klein_2019_MSA_Poster", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Klein_Tobias_2015TIV", "klein-thesis", "Knapp_2017_CVR", "knapp_michael_2004_MAS", "knapp-2004-semi", "koch_bernhard_2018-1", "koch-2018-sso", "koehle-2013-sgv", "koeppel-2021", "Koeppel2020", "Kohlmann-2007-EBV", "kohlmann-2007-livesync", "kohlmann-2008-lse", "kohlmann-2009-cp", "kohlmann-2009-lssl", "kolesar-ivan-2014-polymers", "Kolter_2021", "Konyha_2013_IVA", "korpitsch_thorsten-2019", "korpitsch-2020-cescg", "Korpitsch-2020-wscg", "korpitsch-2021-lov", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2018-LoL", "kouril-2018-LoL", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kovacs_PhD", "krakhofer-2015", "Krone2016VABC", "kuehschelm-2005-adv", "Kugler_2019", "Kuroko-2020-iV", "Labschuetz_Matthias_2015_JIT", "Labschuetz_Matthias_2016_AHD", "Labschuetz_Matthias_2016_JIT", "Labschuetz_Matthias_2016_JITT", "Lackner_2022", "LaCruz2004", "Ladstaedter-2009-sim", "Langer_Edith_IR1", "Langer_Maximillian_DMV", "Laschober-2018", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lemuzic-mindek-sorger-cgfcc", "Leutschacher_2022", "li-2019-gdc", "lie-2009-cri", "lipp-2017-mgpu", "lipp-2017-vulkan", "lippeck-2022-mna", "liu-2014-ac", "lkoell-2014", "ludwig-2012-MT", "Machegger2018DTI", "magg-2021-dva", "magg2021", "mahler-2021-mdar", "major-2010-mrf", "malan_fluoro", "malik-2007-FP", "malik-2009-CVFA", "malik-thesis", "Manczarski-2016", "Marek06", "Maricic_2013_VFE", "martorell2022", "maruyama-2019-iv", "Masopust_2018", "Masterthesis-Viola", "Matkovic_Kresimir_2015_", "matt-2023-vae", "matt-masterthesis", "Mattausch-2003-ISL", "Mattausch-2003-SIE", "Mattausch-2003-Str", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "Mazza_2020", "Mazza_2021_05", "Melo_2018_11", "Meusburger_2020", "Miao_2015_VCBM", "Miao_2019", "Miao_Haichao_2015_VQC", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_plitvice_2018", "miao_thesis_2019", "miao_tvcg_2017", "miao_tvcg_2018", "miao_tvcg_2018", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "Michl_2017_CSV", "mindek_peter-2012-visgroupproj", "mindek_peter-2014-cs_kaust", "mindek-2013-cs_cvut", "mindek-2013-csl", "mindek-2013-pel", "mindek-2014-mcs", "mindek-2014-vivi_cvut", "mindek-2015-mc", "mindek-2015-mctalk", "mindek-2016-utah-talk", "mindek-2017-dsn", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-thesis", "mistelbauer_2013_SIV", "Mistelbauer_2021", "Mistelbauer_Gabriel_2015_NHR", "Mistelbauer_Gabriel_2016", "mistelbauer-2010-pvv", "mistelbauer-2012-cr", "mistelbauer-2012-ssv", "mistelbauer-2013-cfa", "mistelbauer-2015-abvv", "Mitterhofer_2017", "mizuno-2019-eurovis", "Mlejnek_2004_PF", "Mlejnek_2005_AOEPF", "Mlejnek_2006_MVOA", "Mlejnek-2004-Int", "Mlejnek-2004-ITVAC", "Mlinaric-2015-MT", "Moellinger_Christian_IDE2", "moerth_eric-2016-3DF", "moerth-2018-tpose", "monitzer_2008_FluSi", "Morar_2012_ISB", "Muehlbacher_diss_2018", "mueller-2009-ivs", "Muigg_2011_ISI", "Muigg_2011_VC", "Muigg-2008-four", "muigg-2012-svr", "Musleh_PhD", "Neumann-2002-Fea", "nguyen_2020-covid", "Niedermayer_2018", "Novotny_2013_ASVD", "Nowak_2020", "Nowak_2021", "Oancea_2018_1", "Oancea_Stefan_2016_VOT", "Oancea2018OAK", "oeltze-2013-tut", "opitz-2009-cvv", "Ortner_PhD", "Ortner2020", "Pahr_PhD", "pahr-2021-vologram", "pahr-thesis", "Pahr2020", "Pajer_2012_VoM", "Panayotov", "Parzer_2013_IIG", "patel_2009_MC", "patel_daniel_2007_IRSD", "patel-2008-tsa", "patel-2009-evr", "patel-2011-PEA", "Pauschenwein_2022", "Peter_2012_AIV", "Pezenka-2016-MT", "Pfahler_David_2015_IPI", "Pfahler-2016-MT", "PH-2011-LDS", "phd-viola", "Philipp_Hochhauser_2023", "Pilizar_-2020-bachelor", "piringer-2009-hds", "Plank_Pascal_2015_HVP", "plank-2017-sldg", "PMI_AR_2012", "pointner_simon-2020", "polatsek-2018-stv", "polatsek-2018-stv", "Pramerdorfer-2011-PAV", "preim-2009-sve", "Presch_2020", "Priselac2021", "puehringer-2009-sbm", "puenguentzky-2014-ht", "Purchase-2020-gd", "raidou_2018_bladderrunner", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_2020Onc", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_RO2019", "raidou_shonan167", "raidou_slicedice", "raidou_star2019", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2018_rv3", "raidou2018visualflatter", "raidou2019_prsps", "rasch-2016-imgses", "Rau08", "Rautek_Peter_2014_TUC", "Rautek_Peter_2014_VSA", "rautek-2005-dvr", "Rautek-2007-O3D", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-kav", "Rautek-2008-VF", "rautek-2009-vmv", "RAUTEK06", "Rautek06Vis", "Rautek06VMLS", "rautek2010", "Red_Andreas_2015_FFT", "Reh_Andreas_VoP", "reh-2013", "reina-2020-mtv", "Reisacher_Matthias_CPW", "Reisacher2016", "Reiter_2009_IXIA", "Reiter2017CVAP", "Rezk06Vis", "Ribicic_2012_SUS", "Ribicic_2012_VAS", "Ribicic-2010-CRS", "Riegelnegg_2019", "rinortner_susanne-2019-vpicc", "rinortner_susanne-2019-vpicc", "Rippberger_2019", "rippl-2023-atg", "ritzberger-2010-nar", "Ropinski-2012-UBT", "rraidou_clinical", "rraidou_EG17", "rraidou_phdbook", "rsabin-2013", "ruiz-2008-OVR", "ruiz-2008-SEV", "samoul-2019-cnp", "Sanjin_Rados_RV", "Sarkis_2021", "Sbardellati-2019-vcbm", "Sbardellati-2019-vcbm", "sbardellati-2021-eveos", "scharsach-2005-adv", "Schernthaner-2017-MCP", "schindler_2020vis", "Schindler-2022-eurovis", "schindler2020", "schleicher-2011-VLSC", "Schmidlehner_Sandra_SbC", "schmidlehner2021", "schmidt-2011-mt", "schmidt-phd", "schmidt-phd", "schoellhuber-2008-asc", "scholz_2021", "Schrempf_2018", "Schrempf_2020", "SCHUETZ-2023-SIMLOD", "schuh-2018-mesh-blending", "Schulze_Florian_2013_CMI", "schwankl-2013-smis", "seyfert-2017", "shakhova-2023-atp", "sietzen-2019-wnn", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sifuentes-2018-crowd", "SifuentesGangl2017FIS", "sikachev_peter_2010_STLCI", "sikachev_peter-2011-dfc", "sikachev_peter-2011-incshad", "sikachev_peter-2011-metavis", "sikachev_peter-2011-protovis", "sikachev-2010-DFC", "sikachev-2010-ill_vis_vol_ren", "Sippl_Sebastian_EFG", "smiech-2018-tei", "Smisek_Michal_A3D", "Sollboeck_2011_FSS", "sollboeck-2011", "Solteszova-2009-VQN", "solteszova-2010-MOS", "Solteszova2016", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "Soros_AVN_2011", "Soros-AV-2010", "Spechtenhauser_Florian_2016", "spegel-gruenberger-2020", "Spelitz2020", "spoerk-2010-hpgpu", "Stabel_2012_UDM", "stappen_2017_animatedcomic", "Staudacher_2022", "staudacher_florian-2016-topo3d", "stehno-2011-RVD", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "StickmanMax-shoetta-kampfer", "stoff-concepMap-2021", "StrakaVis2004", "stritzel2022", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "suntinger-2008-etet", "suntinger-2008-tet", "Swoboda_Nicolas_VIT", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "termeer-2006-000", "termeer-2007-covicad", "termeer-2008-scmr", "termeer-2008-vis", "termeer-2009-cvc", "termeer-2009-scmr", "textures-3d-printing", "thesis-tekaya", "Thomas-2018", "Thurner-2005-IVR", "toth-2007-ndd", "TR-186-2-05-01", "TR-186-2-05-02", "TR-186-2-05-03", "TR-186-2-05-04", "TR-186-2-05-06", "TR-186-2-05-07", "TR-186-2-05-08", "TR-186-2-06-01", "TR-186-2-06-02", "TR-186-2-06-03", "TR-186-2-06-04", "TR-186-2-07-02", "TR-186-2-07-03", "TR-186-2-07-04", "TR-186-2-07-05", "TR-186-2-07-06", "TR-186-2-07-07", "TR-186-2-07-08", "TR-186-2-07-10", "TR-186-2-07-11", "TR-186-2-07-12", 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Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", 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"sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [], "files": [ { "description": null, "filetitle": "image", "main_file": false, "use_in_gallery": true, "access": "public", "image_width": 335, "image_height": 182, "name": "Gehrer-2017-molmach-image.jpg", "type": "image/jpeg", "size": 15836, "path": "Publication:Gehrer-2017-molmach", "url": "https://www.cg.tuwien.ac.at/research/publications/2017/Gehrer-2017-molmach/Gehrer-2017-molmach-image.jpg", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2017/Gehrer-2017-molmach/Gehrer-2017-molmach-image:thumb{{size}}.png" }, { "description": null, "filetitle": "paper", "main_file": true, "use_in_gallery": false, "access": "public", "name": "Gehrer-2017-molmach-paper.pdf", "type": "application/pdf", "size": 7769733, "path": "Publication:Gehrer-2017-molmach", "url": "https://www.cg.tuwien.ac.at/research/publications/2017/Gehrer-2017-molmach/Gehrer-2017-molmach-paper.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2017/Gehrer-2017-molmach/Gehrer-2017-molmach-paper:thumb{{size}}.png" } ], "projects_workgroups": [ { "id": "illvisation", "workgroup_id": "vis", "drupal_id": 4171, "name": "Visual Computing: Illustrative Visualization", "name_de": null, "website": null, "status": "active", "short_abstract": "The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
\r\n", "website": "https://www.cg.tuwien.ac.at/research/area/InfoVis", "teaser": { "name": "teaser.png", "path": "research_area:InfoVis", "type": "image/png", "size": 60875, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/InfoVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "8564188", "arbesser_ba_2023", "Arleo-2019-vis", "Batik-2021", "batik-2021-gd", "bayat-2022-mva", "beham-2014-cupid", "bhore-2021-issac", "birsak-2014-agtb", "birsak-2017-dpe", "borgo-2013-gly", "borondy2022", "Bruckner_Stefan_2015_VAS", "bugnar-esk-2021", "byska-2019-mdfc", "Cai_2018", "casellato-2016-pkg", "Chen-Information-2016", "cizmic-2018-evd", "cmolik-2020-tvcg", "Cornel_2020", "daae-lampe-2010-dif", "Deutsch-2018", "Diehl_2015", "Diehl_2021", "dworschak-2016-szcm", "Eckelt_2018_01", "edlinger-2018-vwr", "eiweck-hnv-2021", "eschner-2023-evl", "Escribano_2017", "fourousan2021", "furmanova_2020", "Gadllah_Hani_2016", "Gall2020", "Ganuza_ML_2015_ISA", "georgiev-2019-cbg", "geyer_lukas_2015_prj", "geymayer-2017-std", "Groeller_2011_CW", "Groeller_2011_NR", "Groeller_2014_RWA", "Groeller_2016_P1", "Groeller_2016_P2", "Groeller_2016_P4", "Groeller_2016_P6", "Groeller_2021-10", "Groeller_V2_2020", "Groeller_V3_2020", "Groeller_V5_2020", "grossmann-2021-layout", "grossmann-2022-conceptSplatters", "gundacker-2020-wlm", "gusenbauer-2018", "gusenbauer-2018-P", "Heim_2021", "heim-gall-2020-dde", "Heinzl2021", "hromniak-2019-vcn", "Iijima-2020-iV", "indirectBiasLanguageModels-2023", "karnik-09-shapegrammar", "Kehrer-2010-mom", "kehrer-2012-mod", "kehrer-2013-SBC", "Kehrer-2013-STAR", "klaffenboeck-thesis", "Klein_Tobias_2015TIV", "klein-2016-WCL", "koeppel-2021", "Kolter_2021", "Konyha_2013_IVA", "korpitsch-2021-lov", "Kuroko-2020-iV", "Laschober-2018", "li-2019-gdc", "lippeck-2022-mna", "louis-alexandre_dit_petit-frere-2022-veo", "magg2022", "mahler-2021-mdar", "martorell2022", "maruyama-2019-iv", "Matkovic_Kresimir_2015_", "Matkovic-2014-ieee", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "medeiros-2023-gwf", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_Haichao_2015_VQC", "miao2018Dimsum", "mizuno-2019-eurovis", "Muehlbacher_diss_2018", "musleh_maath_2021_mam", "musleh_maath-2021-mam1", "musleh_maath-2021-mam2", "musleh-2022-mam5", "Neubauer2020", "Nowak_2021", "ortner-2016-tunnel", "ortner-2016-visaware", "PH-2011-LDS", "Pilizar_-2020-bachelor", "pirch_2021_VRN", "pointner_simon-2020", "polatsek-2018-stv", "Presch_2020", "Priselac2021", "Purchase-2020-gd", "Purgathofer-2017-China1", "Purgathofer-2017-China2", "Purgathofer-2017-VC-Interface", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_bestphd", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2019_prsps", "Ribicic_2012_VAS", "Rippberger_2019", "sakr_sherif-2020-cacm", "samoul-2019-cnp", "sbardellati-2021-eveos", "schmidt-phd", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sikachev_peter-2011-protovis", "smiech-2018-tei", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger-2013-neuromap", "sorger-2015-litevis", "sorger-2015-taxintec", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "spegel-gruenberger-2020", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "steinschorn-2020-parameter", "stoff-concepMap-2021", "stritzel2022", "Strohmayer-2018-BT", "takahashi-2019-acdt", "Thomas-2018", "TR1862162", "Troidl_2019", "turner-aso", "unger-2019_vcp", "vad_viktor-2017-WVE", "vaico", "Vasileva-2018", "vasileva-2019-smw", "Wagner_032017", "wagner-2024-par", "waldin-2019-ccm", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "webGPU_aggregateVis-2023", "wolf-2023-cc", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-eurovis-star", "wu-2020-tvcg", "ymca", "YOGHOURDJIAN2019" ], "projects": [ "BioNetIllustration", "d9282", "d9522", "deskollage", "Scenario Pool" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=InfoVis", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [ { "href": "https://diglib.eg.org/handle/10.2312/vcbm20171235", "caption": null, "description": null, "main_file": 0 } ], "files": [ { "description": null, "filetitle": "", "main_file": false, "use_in_gallery": true, "access": "public", "preview_image_width": 1474, "preview_image_height": 588, "name": "vad_viktor-2017-WVE-.pdf", "type": "application/pdf", "size": 6012581, "path": "Publication:vad_viktor-2017-WVE", "preview_name": "vad_viktor-2017-WVE-:preview.png", "preview_type": "image/png", "preview_size": 244889, "url": "https://www.cg.tuwien.ac.at/research/publications/2017/vad_viktor-2017-WVE/vad_viktor-2017-WVE-.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2017/vad_viktor-2017-WVE/vad_viktor-2017-WVE-:thumb{{size}}.png" } ], "projects_workgroups": [], "url": "https://www.cg.tuwien.ac.at/research/publications/2017/vad_viktor-2017-WVE/", "__class": "Publication" }, { "id": "mindek-2017-marion", "type_id": "journalpaper", "tu_id": null, "repositum_id": null, "title": "Visualization Multi-Pipeline for Communicating Biology", "date": "2017", "abstract": "We propose a system to facilitate biology communication by developing a pipeline to support the instructional visualization of heterogeneous biological data on heterogeneous user-devices. Discoveries and concepts in biology are typically summarized with illustrations assembled manually from the interpretation and application of heterogenous data. The creation of such illustrations is time consuming, which makes it incompatible with frequent updates to the measured data as new discoveries are made. Illustrations are typically non-interactive, and when an illustration is updated, it still has to reach the user. Our system is designed to overcome these three obstacles. It supports the integration of heterogeneous datasets, reflecting the knowledge that is gained from different data sources in biology. After pre-processing the datasets, the system transforms them into visual representations as inspired by scientific illustrations. As opposed to traditional scientific illustration these representations are generated in real-time - they are interactive. The code generating the visualizations can be embedded in various software environments. To demonstrate this, we implemented both a desktop application and a remote-rendering server in which the pipeline is embedded. The remote-rendering server supports multi-threaded rendering and it is able to handle multiple users simultaneously. This scalability to different hardware environments, including multi-GPU setups, makes our system useful for efficient public dissemination of biological discoveries.\n", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "", "main_file": false, "use_in_gallery": false, "access": "hidden", "image_width": 838, "image_height": 601, "name": "mindek-2017-marion-.png", "type": "image/png", "size": 395582, "path": "Publication:mindek-2017-marion", "url": "https://www.cg.tuwien.ac.at/research/publications/2017/mindek-2017-marion/mindek-2017-marion-.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2017/mindek-2017-marion/mindek-2017-marion-:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 935, "drupal_id": 45, "orcid_id": null, "website": "https://www.cg.tuwien.ac.at/staff/PeterMindek", "firstname": "Peter", "lastname": "Mindek", "searchname": "Peter Mindek", "is_teacher": false, "name": "Peter Mindek", "publications": [ "eschner-2023-ims", "karimov-2013-vivisection", "klein_2019_MSA_Poster", "klein_2019_PGG", "klein_2019_PMP", "koch_bernhard_2018-1", "kouril-2021-molecumentary", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lemuzic-mindek-sorger-cgfcc", "Miao_2019", "mindek_peter-2012-visgroupproj", "mindek_peter-2014-cs_kaust", "mindek-2013-cs_cvut", "mindek-2013-csl", "mindek-2013-pel", "mindek-2014-mcs", "mindek-2014-vivi_cvut", "mindek-2015-mc", "mindek-2015-mctalk", "mindek-2016-utah-talk", "mindek-2017-dsn", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-tedx", "mindek-thesis", "mindek-xmas-card-2014", "mindek-xmas-card-2016", "nguyen_2020-covid", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "TR-186-2-15-03", "wu-2021", "wu-2021-vi", "xmas-2012" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "bayer-2015-gapaot", 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Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" }, { "id": "Rendering", "drupal_id": 4134, "name": "Rendering", "short_abstract": "In this area, we concentrate on algorithms that synthesize images to depict 3D models or scenes, often by simulating or approximating the physics of light.", "abstract": "The rendering of 3D models and scenes has been a major, long-standing challenge in computer graphics that can be divided into two major subfields. Real-time rendering refers to the real-time synthesis of images on commodity graphics hardware to facilitate interaction for visualizations or computer games. The field of physically based rendering focuses on algorithms that accurately simulate the physics of light for use in the movie industry, architectural visualizations, etc. Compared to real-time rendering methods, these algorithms generally require a considerable amount of time (i.e., hours up to days) to generate acceptable results.\n\nIn the context of real-time rendering, our work revolves around the development of algorithms to achieve higher visual quality. Furthermore, we work on techniques to accelerate physically based rendering algorithms to make them viable for interactive rendering. Another aspect of our research work revolves around tools that facilitate the work of content creators.", "website": "https://www.cg.tuwien.ac.at/research/area/Rendering", "teaser": { "name": "teaser.png", "path": "research_area:Rendering", "type": "image/png", "size": 5244928, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/Rendering/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "rend" ], "publications": [ "2011scherzerE", "2018_Mautner_Praktikum", "Adorjan-2015", "agyemang-2021-bsdfproxyppg", "arikan-2014-pcvis", "arikan-2015-dmrt", "Artusi-2003-Del", "ASCHL-2022-OTV", "Auzinger_2012_AAA", "Auzinger_2012_GeigerCam", "Auzinger_2013_AnaVis", "Auzinger_2013_NSAA", "Auzinger_2013_SAR", "Auzinger_2014_DCGI", "Auzinger_2014_UJA", "Auzinger-2015-IST", "bagar2010", "Bauer_Dominik_2018_VR", "bernhard-2011-bmtf", "bernhard-2014-GTOM", "bhagvat-09-frusta", "birsak-2013-sta", "Bittner-2001-Vis", "Bittner-2003-Vis", "Bittner-2004-CHC", "bittner-2005-egsr", "BITTNER-2009-AGVS", "BITTNER-2009-GEFOC", "bittner-2011-scc", "BOKSANSKY-2019-RTS", "brugger-2020-tdp", "brugger-2020-tsdpbr", "Brusi-2001-Opt", "CADIK-2006-IAQ", "CADIK-2008-EHD", "cardoso-2021-cost", "cardoso-2022-rtpercept", "cech-2023-taa", "celarek_adam-2019-qelta", "CELAREK-2017-QCL", "CHARALAMBOS-2007-HLOD", "charpenay-2014-sgn", "cline-09-poisson", "CORNEL-2017-FRS", "CORNEL-2019-IVF", "Devlin-2002-STA", "dodik-2017-pcbpt", "EISEMANN-2011-RTS", "EISEMANN-2012-ERT", "EISEMANN-2013-ERT", "ERLER-2017-HVR", "ESBERGER-2016-AHO", "ESCHNER-2019-GDT", "fink-2012-cg1", "Fischer-2018-sssvr", "FRAISS-2017-PCU", "FRAISS-2022-CGMM", "freude_2020_rs", "FREUDE-2015-phd", "freude-2023-prh", "freude-2023-sem", "GAMPER-2018-OSG", "GANTNER-2018-ARO", "GANTNER-2019-CRS", "gersthofer_2017_COP", "geyer-2018-apbf", "GIEGL-2006-QVS", "GIEGL-2007-FVS", "GIEGL-2007-QV1", "GIEGL-2007-UNP", "gilmutdinov-2022-aomlbwug", "glanz-2017-pbrcomparison", "GRELAUD-2009-EPA", "GRIESHOFER-2018-GOS", "Groeller_2016_P3", "Grossfurtner-2023-paego", "Gruber2019", "guerrero-2008-sli", "Habel_07_xms", "Habel_08_SSH", "Habel_09_PGT", "Habel_2007_IAG", "Habel_2007_RTT", "Habel_2009_PhD", "Habel_2012_PSP", "Habel_LSN_2011", "Habel_RAV_2010", "Habel-09-RAT", "Habel-09-THB", "Habel-2010-EIN", "HAFNER-2015-FEM", "HANN_2022_IPT", "havran-2005-egsr", "havran-2005-sccg", "havran-2006-tut", "hecher-2012-MH", "hecher-2014-MH", "heinz-2019-psi", "hladky-2022-QS", "hofer_kerstin-2023-sketch2model", "horvath_imp", "houska-2020-IPGM", "huerbe-2019-BA", "intel2016", "JAHRMANN-2013-IGR", "JAHRMANN-2015-GRASS", "JAHRMANN-2016-IGR", "JAHRMANN-2017-RRTG", "jeschke-05-AIP", "jeschke-05-ARI", "jeschke-05-ISTAR", "jeschke-09-praguetalk", "jeschke-09-rendering", "Jeschke-2002-LEMA", "Jeschke-2002-TDMR", "JESCHKE-2007-ISC", "jeschke-2010-diff", "jeschke-2011-est", "Jimenez_SSS_2015", "KAFKA-2014-19MRD", "Kathi-2018-VRB", "Keilman2022", "Kellner-2021-DA", "kendlbacher-2016", "kerbl_2019_planet_poster", "kerbl_2021_hdg", "kerbl-2020-improvencoding", "kerbl-2022-trienc", "kimmersdorfer-fancyMaps-2023", "KLAUS-2020-PCC", "klein_2019_PHD", "klein_2019_PMP", "klein-2020-rtgi", "knecht_2013_RSM", "knecht_martin_2010_DIR", "knecht_martin_2012_BRDFEstimation", "knecht_martin_2012_RSMR", "knecht_martin_2013_ReflRefrObjsMR", "knecht_martin-2011-FPSPAR", "knecht-2007-ao", "knecht-2011-CBCM", "koch-2019-PR", "KOCH-2021-GVS", "KOCH-2021-GVSDA", "Koeppl-2023-DLO", "Komon2022", "Konev-FCV2018", "Kovacs_2017", "KREUZER-2015-DPA", "KREUZER-2017-PBF", "kristmann-2022-occ", "kristmann-2023-vkl", "kroesl-2017-LiteMaker", "kroesl-2018-DC", "kroesl-2018-TVS", "kroesl-2019-ICthroughVR", "kroesl-2019-ThesisFF", "KROESL-2020-SVI", "kroesl-2020-XREye", "KUE11", "Kugler-2021", "leopold-2019-vox", "Liang-2023-TVR", "lipp-2019-rtxq3", "LIPP-2020-PHD", "Luidolt-2020-DA", "luidolt-2020-lightperceptionVR", "luksch_2020", "LUKSCH-2013-FLM", "LUKSCH-2014-RTR", "LUKSCH-2019-IGI", "Mantler-06-landscape", "MANTLER-2007-DMBBC", "matt2011", "MATTAUSCH-2006-AVC", "mattausch-2007-iav", "MATTAUSCH-2007-OSP", "mattausch-2008-CHC", "mattausch-2010-tao", "mattausch-2010-var", "Mattausch-2010-vcr", "MATTAUSCH-2012-EOV", "MATTAUSCH-2012-TIS", "MATTAUSCH-2013-FSBE", "MATTAUSCH-2015-CHCRT", "Mazza_2021_05", "MEINDL-2015-OSR", "mindek-2017-marion", "mindek-xmas-card-2016", "murturi_PGG", "neumann-2006-gamma", "OPPITZ-2017-3DM", "oppitz-2023-ais", "OPPTIZ-2018-IVRL", "OTEPKA-2020-PPC", "panfili-2019-VAVR", "panfili-2021-myop", "PB-VRVis-2018-005", "pegrisch_2018_uvs", "PERNDORFER-2015-ECS", "pernsteiner-2022-msh", "pernsteinre_jakob_2020_eechc", "PETER-2023-PSW", "pichler_2022_fro", "pistellato-2023-elp", "pogrzebacz-2023-vkl", "pointner_michael-2017-baa", "preiner_2010_GIPC", "preiner_2017_phd", "preiner11IR", "Preymann-2022-pytamashii", "probst-2023-para", "prost-2016-molecule", "PROST-2017-RTL", "PROST-2019-RTPAL", "Przemyslaw_Gora_2016_UVU", "purgathofer-2004-real", "purgathofer-2004-some", "Purgathofer-2005-Ros", "Purgathofer-2005-Tub", "Purgathofer-2006-VRVis", "radax-2008-ir", "Rainer_2017", "Rait2022", "Reisner_Irene_2013_R3D", "reznicek-2020-fpgaray", "ROEGNER-2014-TUI", "ROEGNER-2015-IBR", "roth_2021_vdst", "roth_vdi", "roth-2023-vlk", "rumpelnik_martin_2020_PRM", "Rumpelnik_Martin-2020-NPR", "rumpler_2019_PPC", "Rumpler-2019-PPC", "RUMPLER-2021-VOGL", "SAKAI-2015-EAPI", "sakai-2021-eif", "sakai-thesis", "schedl-2012-dof", "schedl-2013-gP4", "SCHEIBLAUER-2015-WFC", "scherzer_2010a", "Scherzer-2007-PCS", "SCHERZER-2008-FSR", "scherzer-2009-isvc", "SCHERZER-2012-TCM", "scherzer-eg2010", "scherzer-thesis", "scherzer2010b", "scherzer2010d", "scherzer2010e", "scherzer2011c", "scherzer2011d", "SCHOBER-2006-IVSA", "SCHUETZ-2015-HQP", "SCHUETZ-2016-POT", "schuetz-2018-PPC", "schuetz-2019-CLOD", "schuetz-2019-LCO", "SCHUETZ-2019-PCC", "SCHUETZ-2020-MPC", "schuetz-2020-PPC", "SCHUETZ-2021-DISS", "SCHUETZ-2021-PCC", "SCHUETZ-2022-PCC", "SCHUETZ-2023-LOD", "SCHUETZ-2023-SIMLOD", "schuetz-mb", "schwaerzler_2018_phd", "SCHWAERZLER-2012-FAS", "SCHWAERZLER-2013-FPCSS", "Schwengerer_Mathias-2022-BGL", "Semmelrath-2022-IRS", "silvana_2014", "sippl_tobias_2017_WPC", "SIPPL-2017-POS", "sorger-2015-litevis", "SSMW09", "stappen_SteFAS", "stappen-2019-vrs", "steinkellner-2024-dll", "STEINLECHNER-2019-APS", "STEINLECHNER-2019-ICT", "STREICHER-2022-DSLS", "Sturn-2013-ST", "Szabo-2018-DA", "tatzgern-2020-sst", "Thann_2019_01", "themmer-2018-fbx", "tobler97_hsdasr", "TR 193-02-2019-4", "TR 193-2-2019-4", "TR-186-2-02-04", "TR-186-2-07-01", "TR-186-2-07-09", "TR-186-2-08-09", "TR-186-2-12-01", "traxler-1997-TRA", "Tucek_2018", "Tucek_Tom-2016-aai", "ulschmid-phdthesis", "unterguggenberger-2020-fmvr", "unterguggenberger-2021-msh", "unterguggenberger-2022-vulkan", "VASCO-2019-EVR", "wagner-2024-par", "wallner-2015-ModelingRoutinization", "Wang-2016-BAC", "WEBER-2015-PRA", "WEBER-2015-PRA1", "weidlich_2009_REL", "weidlich-2009-dispersion", "weidlich-2009-thesis", "weinzierl_heigl-2017-wh14", "WESSNER-2019-PCW", "wiesinger_2020_odpr", "wiesinger-2023-gcg", "Wilkie-2001-Ori", "Wilkie-2004-AMS", "wilkie-2006-dfs", "wilkie-2009-cc", "Wimmer-1999-FWIa", "Wimmer-1999-FWIb", "Wimmer-2001-Poi", "Wimmer-2003-RTE", "Wimmer-2004-LSPM", "Wimmer-2005-HOQ", "WIMMER-2006-PSM", "WIMMER-2006-SIV", "WIMMER-2007-GAR", "WIMMER-2007-RTR", "WIMMER-2008-ART", "WIMMER-2008-CAR", "WIMMER-2008-PVR", "WIMMER-2009-ARTR", "WIMMER-2009-ARTR2", "WIMMER-2009-ARTR3", "WIMMER-2009-CSR", "WIMMER-2009-VCCG", "WIMMER-2016-HARVEST4D", "WIMMER-2019-CGSG", "WIMMER-2020-ASG", "wonka-2000-VisP", "Wonka-2001-Ins", "WONKA-2006-GVS", "x-mas-2013", "zeilinger_matthias-2020-baa", "Zezulka_Matthias-2023-MatLabOptInterface", "zotti-2005-lum", "zotti-2006-pla", "zotti-2007-PhD", "zotti-2007-wscg", "ZOTTI-2016-VAA", "ZOTTI-2017-BM", "ZOTTI-2017-TSP", "zsolnai-2018-gms", "zsolnai-feher-thesis-2019", "zsolnai-ist-invited-2014", "zsolnaifeher-2019-pme", "zsolnaifeher-2020-pme" ], "projects": [ "3DSpatialization", "d9259", "d9275", "Desiree", "EVOCATION", "GameTools", "GPV", "Harvest4D", "Mofa", "OpenData", "PathSpace", "REPLICATE", "RESHADE", "Scanopy", "TERAPOINTS", "Treelumination" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=Rendering", "__class": "ResearchArea" } ], "keywords": [ "Biological visualization", "remote rendering", "public dissemination" ], "weblinks": [ { "href": "https://vimeo.com/238851516", "caption": "VIS presentation", "description": null, "main_file": 0 } ], "files": { "1": { "description": null, "filetitle": "Paper", "main_file": true, "use_in_gallery": false, "access": "public", "name": "mindek-2017-marion-Paper.pdf", "type": "application/pdf", "size": 12037780, "path": "Publication:mindek-2017-marion", "url": "https://www.cg.tuwien.ac.at/research/publications/2017/mindek-2017-marion/mindek-2017-marion-Paper.pdf", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2017/mindek-2017-marion/mindek-2017-marion-Paper:thumb{{size}}.png" }, "2": { "description": null, "filetitle": "Preview Movie", "main_file": true, "use_in_gallery": false, "access": "public", "name": "mindek-2017-marion-Preview Movie.avi", "type": "video/avi", "size": 25593216, "path": "Publication:mindek-2017-marion", "url": "https://www.cg.tuwien.ac.at/research/publications/2017/mindek-2017-marion/mindek-2017-marion-Preview Movie.avi", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2017/mindek-2017-marion/mindek-2017-marion-Preview Movie:thumb{{size}}.png", "video_mp4": "https://www.cg.tuwien.ac.at/research/publications/2017/mindek-2017-marion/mindek-2017-marion-Preview Movie:video.mp4" }, "3": { "description": null, "filetitle": "Slides", "main_file": true, "use_in_gallery": false, "access": "public", "name": "mindek-2017-marion-Slides.pptx", "type": "application/vnd.openxmlformats-officedocument.presentationml.presentation", "size": 95389205, "path": "Publication:mindek-2017-marion", "url": "https://www.cg.tuwien.ac.at/research/publications/2017/mindek-2017-marion/mindek-2017-marion-Slides.pptx", "thumb_image_sizes": [] } }, "projects_workgroups": [ { "id": "illvisation", "workgroup_id": "vis", "drupal_id": 4171, "name": "Visual Computing: Illustrative Visualization", "name_de": null, "website": null, "status": "active", "short_abstract": "The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
In computer graphics we produce images, videos, visualizations and other content that is perceived by humans. By understanding the limits of human perception, we can design and optimize rendering algorithms that perfectly fit users' needs, tailor visualizations to make data better understandable, and effectively draw the user's attention to important information.
\r\n", "website": "https://www.cg.tuwien.ac.at/research/area/Perception", "teaser": { "name": "teaser.PNG", "path": "research_area:Perception", "type": "image/png", "size": 259428, "orig_name": "teaser.PNG", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/Perception/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "rend", "vis" ], "publications": [ "bernhard-2011-maicg", "bernhard-2014-EFD", "bernhard-2014-GTOM", "bernhard-2016-gft", "birkeland_aasmund_2014_pums", "cardoso-2022-rtpercept", "ERLER-2017-HVR", "eschner-2023-ims", "eschner-blur-2022", "georgiev-2019-cbg", "Groeller_2016_P7", "grossmann-2021-layout", "hecher-2012-MH", "hecher-2014-MH", "HECHER-2017-HDY", "huerbe-2019-BA", "Kathi-2018-VRB", "koch-2019-PR", "Koszticsak-2017-ewt", "KREUZER-2017-PBF", "kristmann-2022-occ", "kroesl-2018-DC", "kroesl-2018-TVS", "kroesl-2019-ICthroughVR", "kroesl-2019-ThesisFF", "kroesl-2020-XREye", "Laschober-2018", "Luidolt-2020-DA", "luidolt-2020-lightperceptionVR", "mayr-2021-wec", "mindek-2017-dsn", "panfili-2019-VAVR", "panfili-2021-myop", "plank-2017-sldg", "polatsek-2018-stv", "Reichinger-2016-spaghetti", "schindler_2020vis", "schuller_reichl-2019-avt", "Semmelrath-2022-IRS", "stappen_SteFAS", "steinkellner-2022-dll", "sundstedt-2013-vag", "trautner-2018-imd", "Vasylevska_Khrystyna-2019-TEFVR", "viola-evr", "Waldin_Nicholas_2016_Colormaps", "Waldin_Nicholas_2016_Individualization", "Waldin_Nicholas_2017_FlickerObserver", "waldin-2017-thesis", "waldner-2013-facetCloudsGI", "waldner-2014-af", "waldner-2017-vph", "waldner-2019-rld" ], "projects": [ "CROSSMOD" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=Perception", "__class": "ResearchArea" } ], "keywords": [ "Narrative Visualization", "Flicker", "Visual Attention" ], "weblinks": [ { "href": "http://dx.doi.org/10.1109/TVCG.2014.2346352", "caption": null, "description": null, "main_file": 0 } ], 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Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
Data and information created by various processes (e.g., simulations) is getting larger, and more and more complex. We use interactive visualization and analysis techniques to facilitate exploration of complex parameter spaces (e.g., to analyze and compare parameters for automotive engineering, reconstruction algorithms, or geometry generators) or unstructured information collections (e.g., annotated digital documents or image collections). Our research focus lies on novel visual encodings and interaction techniques to explore a large amount of abstract data, often in combination with analytical reasoning.
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"martorell2022", "maruyama-2019-iv", "Matkovic_Kresimir_2015_", "Matkovic-2014-ieee", "mayr-2021-wec", "mazurek-2017-sio", "mazurek-2017-vows", "mazurek-2018-vac", "mazurek-2018-veq", "medeiros-2023-gwf", "Miao_2015_VCBM", "miao_2016_cgf", "Miao_Haichao_2015_VQC", "miao2018Dimsum", "mizuno-2019-eurovis", "Muehlbacher_diss_2018", "musleh_maath_2021_mam", "musleh_maath-2021-mam1", "musleh_maath-2021-mam2", "musleh-2022-mam5", "Neubauer2020", "Nowak_2021", "ortner-2016-tunnel", "ortner-2016-visaware", "PH-2011-LDS", "Pilizar_-2020-bachelor", "pirch_2021_VRN", "pointner_simon-2020", "polatsek-2018-stv", "Presch_2020", "Priselac2021", "Purchase-2020-gd", "Purgathofer-2017-China1", "Purgathofer-2017-China2", "Purgathofer-2017-VC-Interface", "raidou_2019_pelvisrunner", "raidou_2019_preha", "raidou_2019_springer", "raidou_bestphd", "raidou_EuroVis15", "raidou_eurovis16", "raidou_miccai16", "raidou_pingu2020", "raidou_previs2021", "raidou_vcbm14", "raidou_vis14", "raidou_vis15", "raidou_visgap2020", "raidou2019_prsps", "Ribicic_2012_VAS", "Rippberger_2019", "sakr_sherif-2020-cacm", "samoul-2019-cnp", "sbardellati-2021-eveos", "schmidt-phd", "sietzen-2019-wnn", "sietzen-2021-perturber", "sietzen-2022-vacnnr", "sietzen-ifv-2019", "sikachev_peter-2011-protovis", "smiech-2018-tei", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger-2013-neuromap", "sorger-2015-litevis", "sorger-2015-taxintec", "sorger-2017-thesis", "sorger-2019-odn", "sorger-2021-egonet", "spegel-gruenberger-2020", "steinboeck-2017-vbn", "steinboeck-2017-vefp", "steinboeck-2018-lbg", "STEINLECHNER-2019-ICT", "steinschorn-2020-parameter", "stoff-concepMap-2021", "stritzel2022", "Strohmayer-2018-BT", "takahashi-2019-acdt", "Thomas-2018", "TR1862162", "Troidl_2019", "turner-aso", "unger-2019_vcp", "vad_viktor-2017-WVE", "vaico", "Vasileva-2018", "vasileva-2019-smw", "Wagner_032017", "wagner-2024-par", "waldin-2019-ccm", "waldner-2013-facetCloudsGI", "waldner-2013-ubiWM", "waldner-2014-ghi", "waldner-2017-vph", "waldner-2019-rld", "waldner-2020-tbg", "waldner-2021-leo", "waser_2011_VSD", "webGPU_aggregateVis-2023", "wolf-2023-cc", "wu-2017-dagstuhl", "wu-2018-JVLC", "wu-2018-metabo", "wu-2018-shonan", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-smw", "wu-2019-smwp", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-eurovis-star", "wu-2020-tvcg", "ymca", "YOGHOURDJIAN2019" ], "projects": [ "BioNetIllustration", "d9282", "d9522", "deskollage", "Scenario Pool" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=InfoVis", "__class": "ResearchArea" } ], "keywords": [], "weblinks": [], "files": [ { "description": null, "filetitle": "paper", "main_file": false, "use_in_gallery": false, "access": "public", "name": "sorger-2013-neuromap-paper.pdf", "type": "application/pdf", "size": 1416747, "path": "Publication:sorger-2013-neuromap", "url": 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Competence Center", "name_de": null, "website": null, "status": "active", "short_abstract": "The VRVis K1 Research Center is the leading application oriented research center in the area of virtual reality (VR) and visualization (Vis) in Austria and is internationally recognized. You can find extensive Information about the VRVis-Center here
\r\n", "abstract": "The VRVis K1 Research Center is the leading application oriented research center in the area of virtual reality (VR) and visualization (Vis) in Austria and is internationally recognized. You can find extensive Information about the VRVis-Center here
\r\n", "start_date": "2000-01-01", "end_date": null, "leader_id": 190, "logo": { "name": "logo.png", "path": "project:VRVis", "type": "image/png", "size": 3275, "orig_name": "logo.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/projects/VRVis/logo:thumb{{size}}.png", "thumb_image_sizes": [ 120, 300 ] }, "funding_organisations": [ { "id": "K1", "contract_number": null, "comment": null } ], "research_areas": [], "publications": [ "Ahmed-2008-EGVE", "Bauer_Dominik_2018_VR", "Berger_2011_UAE", "brunnhuber-2010-behavior-handicapped", "Cai_2018", "CORNEL-2014-AFRS", "CORNEL-2017-FRS", "CORNEL-2019-IVF", "cornel-2022-wih", "donabauer_2019_1", "Eibner-12", "ERLER-2017-HVR", "Freiler-2008-Set", "Gan-2011-ICU", "Ganuza", "Ganuza-2017-IVCSGM", "ilcik-2008-sgfa", "Kathi-2018-VRB", "kavelar_albert_2010_ebic", "Kellner-2021-DA", "kim_2009_iPhone", "Kim-2008_FWIP", "Konev-FCV2018", "konyha_2006_int", "Konyha_2007_SCV", "Konyha_2009_survey", "kroesl-2017-LiteMaker", "kroesl-2018-DC", "kroesl-2018-TVS", "kroesl-2019-ICthroughVR", "Laramee-2004-thesis", "ludwig-2012-MT", "luksch_2020", "LUKSCH-2014-RTR", "LUKSCH-2019-IGI", "Mantler-2011-GEAR", "matkovic_2009_flickr", "matkovic-2007-clv", "Matkovic-2008-Bergen", "Matkovic-2008-ComVis", "Matkovic-2008-med", "Matkovic-2008-Steer", "matkovic-2010-eventlineview", "Matkovic-2014-ieee", "May_Michael_2015_DIS", "MEINDL-2015-OSR", "Miklin-2009-Mig", "Muehlbacher_diss_2018", "musialski-2009-sbfr", "musialski-2010-imv", "musialski-2010-pfi", "musialski-2010-tof", "ortner-2016-tunnel", "ortner-2016-visaware", "PB-VRVis-2018-005", "Pfahler-2016-MT", "PROST-2017-RTL", "PROST-2019-RTPAL", "Przemyslaw-2010-ADS", "Purg2015-b", "Purg2015-c", "Purg2015-China", "Purg2015-d", "purgathofer_2016I1", "Purgathofer-2013-cvws", "Purgathofer-2014-ETH", "Purgathofer-2014-LSM", "Purgathofer-2014-PanEu", "Purgathofer-2014-Rio", "Purgathofer-2015-WA", "Purgathofer-2017-China1", "Purgathofer-2017-China2", "Purgathofer-2017-VC-Interface", "Purgathofer-2018-EG", "Rainer_2017", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reichinger-2011-Tac", "Reichinger-2016-spaghetti", "Reichinger-2018-TAC", "reisner-2010-1dh", "reisner-2010-ind", "reisner-2011-akgeo", "reisner-2011-comdm", "reisner-2012-iwssip", "SCHOBER-2006-IVSA", "schuetz-2019-CLOD", "schwaerzler_2018_phd", "SCHWAERZLER-2017-SBGM", "Shi_2007_PathLines", "Singh-2008-Metric", "sorger-2013-neuromap", "sorger-2015-litevis", "sorger-2015-taxintec", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "STEINLECHNER-2019-APS", "STEINLECHNER-2019-ICT", "STREICHER-2022-DSLS", "Szabo-2018-DA", "Trobec-2008-Heart", "Walch-2017-DA", "Wimmer_Maria_2015_SAS", "Zusag-2017-Bach" ], "url": "https://www.cg.tuwien.ac.at/research/projects/VRVis", "__class": "Project" } ], "url": "https://www.cg.tuwien.ac.at/research/publications/2013/sorger-2013-neuromap/", "__class": "Publication" }, { "id": "Viola_Ivan_2013_SVA", "type_id": "inproceedings", "tu_id": null, "repositum_id": null, "title": "Seamless Visual Abstraction of Molecular Surfaces", "date": "2013-05", "abstract": "Molecular visualization is often challenged with rendering of large\nsequences of molecular simulations in real time. We introduce a\nnovel approach that enables us to show even large protein complexes\nover time in real-time. Our method is based on the level-ofdetail\nconcept, where we exploit three different molecular surface\nmodels, solvent excluded surface (SES), Gaussian kernels and van\nder Waals spheres combined in one visualization. We introduce\nthree shading levels that correspond to their geometric counterparts\nand a method for creating seamless transition between these representations.\nThe SES representation with full shading and added\ncontours stands in focus while on the other side a sphere representation\nwith constant shading and without contours provide the\ncontext. Moreover, we introduce a methodology to render the entire\nmolecule directly using the A-buffer technique, which further\nimproves the performance. The rendering performance is evaluated\non series of molecules of varying atom counts.", "authors_et_al": false, "substitute": null, "main_image": { "description": null, "filetitle": "", "main_file": false, "use_in_gallery": false, "access": "public", "image_width": 1935, "image_height": 1564, "name": "Viola_Ivan_2013_SVA-.png", "type": "image/png", "size": 1049474, "path": "Publication:Viola_Ivan_2013_SVA", "url": "https://www.cg.tuwien.ac.at/research/publications/2013/Viola_Ivan_2013_SVA/Viola_Ivan_2013_SVA-.png", "thumb_image_sizes": [ 16, 64, 100, 175, 300, 600 ], "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/2013/Viola_Ivan_2013_SVA/Viola_Ivan_2013_SVA-:thumb{{size}}.png" }, "sync_repositum_override": null, "authors": [ { "id": 1143, "drupal_id": null, "orcid_id": null, "website": null, "firstname": "Julius", "lastname": "Parulek", "searchname": "Julius Parulek", "is_teacher": false, "name": "Julius Parulek", "publications": [ "2013_Viola_Ivan_2013_MTS", "cellVIEW_2015", "kolesar-ivan-2014-polymers", "Kozlikova-Visualization-2016b", "Krone2016VABC", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "Viola_2013_IDV", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "Viola_Ivan_2013_SVA", "field_id": "lecturer", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1143", "__class": "Author" }, { "id": 951, "drupal_id": null, "orcid_id": null, "website": "https://www.uni-ulm.de/in/mi/institut/mitarbeiter/timo-ropinski/", "firstname": "Timo", "lastname": "Ropinski", "searchname": "Timo Ropinski", "is_teacher": false, "name": "Timo Ropinski", "publications": [ "celarek-2022-gmcn", "raidou_shonan167", "reina-2020-mtv", "Ropinski-2012-UBT", "Viola_2013_IDV", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_UVP" ], "publications_first": 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"burns-2007-fea", "cellVIEW_2015", "Chen-Information-2016", "Cornel2016CFM", "Csebfalvi-2002-FPVF", "diss-thesis-bratislava", "diss-thesis-magdeburg", "diss-thesis-siegen", "eg-tut2005-iv", "Ford-2012-HRV", "Furmanova_2018", "Gehrer-2017-molmach", "Groeller-2017-PTPMD", "Hadwiger-2002-Fas", "Halladjian_2020", "Kehl-Direct-2016", "klein_2017_IM", "klein_2019_MSA_Poster", "klein_2019_PGG", "klein_2019_PMP", "koch_bernhard_2018-1", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "kouril-2017-sccgposter", "kouril-2018-LoL", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "Kozlikova-Visualization-2016b", "Krone2016VABC", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lemuzic-mindek-sorger-cgfcc", "li-2019-gdc", "Masterthesis-Viola", "Mazza_2020", "Miao_2019", "miao_nantech_2019", "miao_nar_2020", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2015-mc", "mindek-2017-marion", "mindek-2017-virtualcell", "Neumann-2002-Fea", "nguyen_2020-covid", "patel-2010-SVV", "phd-viola", "polatsek-2018-stv", "Rautek-2008-kav", "Rautek-2008-VF", "Rautek06Vis", "Reisacher2016", "ruiz-2008-OVR", "ruiz-2008-SEV", "Sarkis_2021", "Sbardellati-2019-vcbm", "sbert-2017-sa_course_0023", "seyfert-2017", "solteszova-2010-MOS", "Solteszova2016", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "toth-2007-ndd", "TR-186-2-05-06", "TR-186-2-05-07", "TR-186-2-05-08", "TR-186-2-06-01", "TR-186-2-06-02", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_2013_IDV", "Viola_Ivan_2013_CAI", "Viola_Ivan_2013_D3D", "Viola_Ivan_2013_DC", "Viola_Ivan_2013_GS", "Viola_Ivan_2013_HQ3", "Viola_Ivan_2013_RMA", "Viola_Ivan_2013_RSb", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_DAC", "Viola_Ivan_IIP", 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"Wihann_2017", "field_id": "supervisor", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=171", "__class": "Author" } ], "booktitle": "SCCG 2013 - 29th Proceedings Spring conference on Computer Graphics", "date_from": "2013-05-01", "date_to": "2013-05-03", "editor": "Roman Durikovič, Holly Rushmeier", "isbn": "978-80-223-3377-1", "lecturer": [ { "id": 1143, "drupal_id": null, "orcid_id": null, "website": null, "firstname": "Julius", "lastname": "Parulek", "searchname": "Julius Parulek", "is_teacher": false, "name": "Julius Parulek", "publications": [ "2013_Viola_Ivan_2013_MTS", "cellVIEW_2015", "kolesar-ivan-2014-polymers", "Kozlikova-Visualization-2016b", "Krone2016VABC", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "Viola_2013_IDV", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP" ], "publications_first": [], "project_leader": [], "publication_field": [ { "publ_id": "Viola_Ivan_2013_SVA", "field_id": "lecturer", "ordernum": 0 } ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=Author&id=1143", "__class": "Author" } ], "location": "Smolenice, Slovak Republic", "organization": "Comenius University, Bratislava", "pages_from": "120", "pages_to": "127", "publisher": "ACM Publishing House", "series": " SCCG '13", "research_areas": [ { "id": "BioVis", "drupal_id": 4127, "name": "Biological Data Visualization", "short_abstract": "In this research area, we develop new visualization techniques to support biologists in data analysis and create visualizations to disseminate scientific discoveries in biology.", "abstract": "In modern biological research domain experts have to deal with complex and large data collections and simulations. Our goal is to support biological researches in molecular biology and phenotyping communities by developing visualizations that complement statistical methodology and wet lab with visual data analysis. Our tools allow the domain experts to see the key information they are looking for that relates to the studied structure, such as tunnels in molecules on the nanoscale or root shape distributions on the macroscopic magnification levels.\nEqually important is the role of visualization in explaining certain phenomenon to a larger audience. Biologists create large structural models that reflect the state-of-the-art knowledge about a certain living organism. This form of captured knowledge can be effectively communicated with interactive visualization, especially the aspect of understanding interplay of multiple spatial and temporal scales. With our visualization technology audience can therefore seamlessly zoom from zoom level when seeing entire bacteria down to its atomic detail.\n", "website": "https://www.cg.tuwien.ac.at/research/area/BioVis", "teaser": { "name": "teaser.png", "path": "research_area:BioVis", "type": "image/png", "size": 16330957, "orig_name": "teaser.png", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/BioVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "amirkhanov-2019-manylands", "byska-2019-mdfc", "cellVIEW_2015", "cmolik-2020-tvcg", "Dietrich_1", "dietrich-2016-viseq2", "Ehlers_PhD", "eschner-2023-ims", "eschner-blur-2022", "Escribano_2017", "Furmanova_2018", "Gehrer-2017", "Gehrer-2017-molmach", "glinzner-2016-tex", "Halladjian_2020", "kapferer-2017-godot", "klein_2017_IM", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "koch-2018-sso", "Kolesar-Fractional-2016", "kolesar-ivan-2014-polymers", "kouril-2015-maya2cellview", "kouril-2017-sccgposter", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "Kozlikova-Visualization-2016b", "Krone2016VABC", "Kugler_2019", "lemuzic_2015_timelapse", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "lipp-2017-mgpu", "lipp-2017-vulkan", "Manczarski-2016", "manylands_award", "Miao_2019", "miao_inria_2017", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao_thesis_2019", "miao_tvcg_2018", "miao2018Dimsum", "Miao2018FDN", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-xmas-card-2016", "Mitterhofer_2017", "nguyen_2020-covid", "Nowak_2020", "raidou_2019_springer", "raidou_shonan167", "raidou2018visualflatter", "rasch-2016-imgses", "Reisacher2016", "rinortner_susanne-2019-vpicc", "Sarkis_2021", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "sMolBoxes_2022", "Sorger_2013_nMI", "sorger_2017_metamorphers", "sorger-2013-neuromap", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "stappen_2017_animatedcomic", "Strohmayer-2018-BT", "sturl_2016_dynlabels", "trautner-2018-imd", "unger-2019_vcp", "vad_2015_phd", "vad_viktor-2017-WVE", "vad-2016-bre", "Viola_Ivan_2013_SVA", "Viola_Ivan_2013_VCA", "Viola_Ivan_2015_AAM", "Viola_Ivan_2015_MCT", "Viola_Ivan_2015_VBS", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "waldin-2019-ccm", "waldner-2014-af", "Weissenboeck_2019", "wu-2017-dagstuhl", "wu-2018-metabo", "wu-2018-story", "wu-2019-bmc", "wu-2019-report", "wu-2019-vcbm", "wu-2019-visworkshop", "wu-2020-tvcg" ], "projects": [ "BioNetIllustration", "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=BioVis", "__class": "ResearchArea" }, { "id": "IllVis", "drupal_id": 4131, "name": "Illustrative Visualization", "short_abstract": "In this research area, we develop rendering methods that are inspired by scientific illustrations, in order to make complex biological information more intuitive to understand and more pleasant to read.", "abstract": "Scientific illustration is concerned with researching ways in which complex biological and medical data can be abstracted in order to convey a desired information that would otherwise be impossible or hard to retrieve from the original data. Illustrators apply such techniques, for instance, to present non-important parts of an organ in a simplified way, while using detailed representations to put the focus of attention on a region where a tumor might be situated.\n\nTo identify such meaningful visual abstractions for visualization, their effectiveness for human perception and cognition has to be assessed, and they have to be formalized in order to make them applicable in rendering algorithms. In this project, we try to advance the understanding of procedural visual abstraction of complex physiological processes that describe the complex machinery of biological life.", "website": "https://www.cg.tuwien.ac.at/research/area/IllVis", "teaser": { "name": "teaser.jpg", "path": "research_area:IllVis", "type": "image/jpeg", "size": 34861, "orig_name": "teaser.jpg", "thumb_url": "https://www.cg.tuwien.ac.at/research/publications/research_area/IllVis/teaser:thumb{{size}}.png", "thumb_image_sizes": [ 64, 120, 300 ] }, "workgroups": [ "vis" ], "publications": [ "2017-kouril-illcell", "Alharbi_2021", "Antonini2020", "Balabanian-2010-IIV", "Balduz_01", "Bayat_2019", "Bechtold2020", "Birkeland-2012-IMC", "brandstaetter_01", "bruckner-2005-ICV", "bruckner-2006-ICE", "bruckner-2007-STF", "bruckner-2008-IIV", "bruckner-2010-HVC", "bruckner-2010-IFC", "cellVIEW_2015", "Chen-Information-2016", "Deutsch-2018", "Dhanoa_2021", "dietrich-2016-viseq2", "donabauer_2019_1", "eg-tut2005-iv", "eschner-2023-ims", "Essler2022", "gangl-2018-gpsart", "Gehrer_Daniel_CUI", "Gehrer-2017-molmach", "gerl-2006-vhi", "Gogel2020", "Groeller_2011_IPV", "Groeller_2016_I3", "Groeller_2016_I6", "Groeller_2016_I7", "Groeller_2016_I8", "Groeller_V1_2020", "groeller-2006-ivt", "groeller-2007-fci", "groeller-2008-irs", "Groeller-2010-IFI", "Halladjian_2020", "haushofer-2018-skinning", "Heim_2020", "horvath-2018-ism", "klein_2019_PGG", "klein_2019_PHD", "klein_2019_PMP", "Knapp_2017_CVR", "Koeppel2020", "kolesar-ivan-2014-polymers", "Konev-FCV2018", "Koszticsak-2017-ewt", "Kouril_2017_11", "kouril-2020-hyperlabels", "kouril-2021-molecumentary", "kouril-2021-phdthesis", "kroesl_x_card_2017", "Lackner_2022", "Langer_Edith_IR1", "lawonn-2018-illvisstar", "lemuzic_2014_ipv", "lemuzic_2015_timelapse", "LeMuzic_2016_PhD", "lemuzic-2014-ivm", "lemuzic-2015-hiv", "lemuzic-mindek-2016-viseq", "Leutschacher_2022", "ludwig-2012-MT", "Manczarski-2016", "Matusich-2017-01", "Mautner 2020", "Mayr-2017-1", "Melo_2018_11", "Meusburger_2020", "Miao_2019", "miao_inria_2017", "miao_kaust_2018", "miao_nantech_2019", "miao_nar_2020", "miao_stateKeylabTalk_2017", "miao2018Dimsum", "Michl_2017_CSV", "mindek-2015-mc", "mindek-2016-utah-talk", "mindek-2017-marion", "mindek-2017-virtualcell", "mindek-2018-fyi", "mindek-2019-mci", "mindek-xmas-card-2016", "Moellinger_Christian_IDE2", "Niedermayer_2018", "Ortner_PhD", "Ortner2020", "pahr-2021-vologram", "Panayotov", "patel_daniel_2007_IRSD", "Pauschenwein_2022", "Peter_2012_AIV", "plank-2017-sldg", "prost-2016-molecule", "purgathofer-2008-cgi", "Radwan-2017-Occ", "Rautek-2007-SLI", "Rautek-2008-IDS", "Rautek-2008-VF", "Reichinger_2016", "Reichinger_Fuhrmann_2016", "Reisacher_Matthias_CPW", "Reisacher2016", "Riegelnegg_2019", "rippl-2023-atg", "sbardellati_ba_2018", "Sbardellati-2019-vcbm", "schindler_2020vis", "schmidlehner2021", "scholz_2021", "Schrempf_2020", "seyfert-2017", "sikachev-2010-ill_vis_vol_ren", "sorger_2017_metamorphers", "sorger-2016-fowardabstraction", "sorger-2017-thesis", "Spechtenhauser_Florian_2016", "stappen_2017_animatedcomic", "Stoll2020", "sturl_2016_dynlabels", "Swoboda2020", "szabo_patrik-2022-tour", "takahashi-2019-acdt", "Thomas-2018", "TR-186-2-07-08", "Troidl_2021", "Troidl_2022", "tut-eg-2006", "tut-siggraph-2006", "tut-vis-2006", "tut-vis-2007", "Unger2020", "Vasileva_2022", "Viola_Ivan_2013_SVA", "Viola_Ivan_CLD", "Viola_Ivan_IIP", "viola-evr", "Viola-Pondering-2017", "Viola-vistutillustrativevis", "Waldin_Nicholas_2016_Colormaps", "waldin-2019-ccm", "Waldner_2017_11", "Wihann_2017", "Woschizka_2021", "wu-2019-bmc", "wu-2019-report", "Zaufel_2021", "zechmeister2020", "Zeng_2021", "Zusag-2017-Bach" ], "projects": [ "Illustrare", "illvisation" ], "url": "https://www.cg.tuwien.ac.at/research/publications/show.php?class=ResearchArea&id=IllVis", "__class": "ResearchArea" } ], "keywords": [ "Implicit Surfaces", " Level-of-detail", "Visualization of Molecular Surfaces" ], "weblinks": [], 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"https://www.cg.tuwien.ac.at/research/publications/2013/Viola_Ivan_2013_SVA/Viola_Ivan_2013_SVA-Paper:thumb{{size}}.png" } ], "projects_workgroups": [ { "id": "illvisation", "workgroup_id": "vis", "drupal_id": 4171, "name": "Visual Computing: Illustrative Visualization", "name_de": null, "website": null, "status": "active", "short_abstract": "The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness
The central focus of our research is to understand visual abstraction. Understanding means 1. to identify meaningful visual abstractions, 2. to assess their effectiveness for human perception and cognition and 3. to formalize them to be executable on a computational machinery. The outcome of the investigation is useful for designing visualizations for a given scenario or need, whose effectiveness can be quantified and thus the most understandable visualization design can be effortlessly determined. The science of visualization has already gained some understanding of structural visual abstraction. When for example illustrators, artists, and visualization designers convey certain structure, or visually express how things look, we can often provide a scientifically-founded argument whether and why is their expression effective for human cognitive processing. What has not been given sufficient scientific attention to, is advancing the understanding of procedural visual abstraction, in other words investigating visual means that convey what things do or how things work. This missing piece of knowledge would be very useful for visual depiction of processes and dynamics that are omnipresent in science, technology, but also in our everyday lives. The upcoming project will therefore investigate theoretical foundations for visualization of processes. Physiological processes that describe the complex machinery of biological life will be picked as a target scenario. The reason for this choice is two-fold. Firstly, these processes are immensely complex, are carried-out on various spatial and temporal levels simultaneously, and can be sufficiently understood only if all scales are considered. Secondly, physiological processes have been modeled as a result of intensive research in biology, systems biology, and biochemistry and are available in a form of digital data. The goal will be to visually communicate how physiological processes participate on life by considering the limitations of human perceptual and cognitive capabilities. By solving individual visualization problems of this challenging target scenario, the research will provide first pieces of understanding of procedural visual abstractions that are generally applicable, beyond the chosen target domain. Prototype implementation of the developed technology is available at the GitHub repository: https://github.com/illvisation/
\r\n\r\nPrototype implementation of the developed technology is available at the GitHub repository:
\r\nhttps://github.com/illvisation/
cellVIEW is a new tool that provides fast rendering of very large biological macromolecular scenes and is inspired by state-of-the-art computer graphics techniques. Click here for additional information.
\r\n\r\n18.11.2016: Arthur J. Olson, Envisioning the Visible Molecular Cell
\r\n17.10.2016: Kwan-Liu Ma, Emerging Topics for Visualization Research: Part1, Part2
\r\n07.10.2016: Marc Streit, From Visual Exploration to Storytelling and Back Again
\r\n04.12.2015: Jan Palacek, Visual Analysis of Protein Complexes: From Protein Interaction to Cellular Processes
\r\n19.04.2013: Jan Koenderink, Shape in Visual Awareness